Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F02
         (81 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   4.1  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   4.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    19   7.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   7.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    18   9.5  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +3

Query: 3   ICLHQYIIVFWLSTT 47
           +C+  Y+I  W +T+
Sbjct: 541 LCIPGYMIYIWFTTS 555


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +3

Query: 3   ICLHQYIIVFWLSTT 47
           +C+  Y+I  W +T+
Sbjct: 594 LCIPGYMIYIWFTTS 608


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 37  CRLRADEST*SSYI 78
           C+LRA  S  SSY+
Sbjct: 107 CKLRAYVSETSSYV 120


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 25   LYFGCRLR 48
            L+FGCR R
Sbjct: 1004 LFFGCRQR 1011


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 73  NLIMLTRPRVVDNQN 29
           +LIM TR    DNQN
Sbjct: 576 DLIMNTRCANSDNQN 590


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,104
Number of Sequences: 438
Number of extensions: 179
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 8
effective length of database: 142,839
effective search space used:  2571102
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)