Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F01
(503 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17) 36 0.019
SB_39703| Best HMM Match : PHD (HMM E-Value=9.3e-12) 35 0.044
SB_17436| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_46020| Best HMM Match : PHD (HMM E-Value=9.3e-12) 31 0.71
SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43) 28 3.8
SB_20314| Best HMM Match : RVT_1 (HMM E-Value=1e-32) 28 3.8
SB_48461| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 28 3.8
SB_32738| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-13) 28 3.8
SB_16447| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_40333| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_28995| Best HMM Match : LicD (HMM E-Value=0.018) 27 8.8
>SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17)
Length = 1828
Score = 35.9 bits (79), Expect = 0.019
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Frame = +2
Query: 47 ERTALGDA--IDKASLKLLKEAYTSSDDKNVVSS---PLGAMFLL-SLYRDGAGKQSQEE 208
+R LG D S + ++ +T SD VSS P G + L SLY D ++ +E+
Sbjct: 1084 QRPTLGRVRNFDVVSSEFIQILHTRSDHWVCVSSLGCPPGYVHLYDSLYHDVISQEIEEQ 1143
Query: 209 INNVLGGEKYISVDIVHPVNEYSSLSKQFSEMNPDFFTMASKI 337
N++LGG IS+D V PV + S+ S + + D + + +K+
Sbjct: 1144 TNDLLGG-SLISLDFV-PVQQQSNASVK-GRIVSDKYVVVAKV 1183
Score = 34.3 bits (75), Expect = 0.058
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +2
Query: 47 ERTALGDA--IDKASLKLLKEAYTSSDDKNVVSS---PLGAMFLL-SLYRDGAGKQSQEE 208
+R LG D S + ++ +T SD VSS P G + L SLY D ++ +E+
Sbjct: 1697 QRPTLGRVRNFDVVSSEFIQILHTRSDHWVCVSSLGCPPGYVHLYDSLYHDVISQEIEEQ 1756
Query: 209 INNVLGGEKYISVDIVHPVNEYSS 280
N++LGG IS+D V PV + S+
Sbjct: 1757 TNDLLGG-SLISLDFV-PVQQQSN 1778
>SB_39703| Best HMM Match : PHD (HMM E-Value=9.3e-12)
Length = 886
Score = 34.7 bits (76), Expect = 0.044
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +2
Query: 47 ERTALGDA--IDKASLKLLKEAYTSSDDKNVVSS---PLGAMFLL-SLYRDGAGKQSQEE 208
+R LG D S + ++ +T SD VSS P G + L SLY D ++ +E+
Sbjct: 653 QRPTLGRVRNFDVVSSEFIQILHTGSDHWVCVSSLGCPPGYVHLYDSLYHDVISQEIEEQ 712
Query: 209 INNVLGGEKYISVDIVHPVNEYSS 280
N++LGG IS+D V PV + S+
Sbjct: 713 TNDLLGG-SLISLDFV-PVQQQSN 734
Score = 34.7 bits (76), Expect = 0.044
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +2
Query: 47 ERTALGDA--IDKASLKLLKEAYTSSDDKNVVSS---PLGAMFLL-SLYRDGAGKQSQEE 208
+R LG D S + ++ +T SD VSS P G + L SLY D ++ +E+
Sbjct: 804 QRPTLGRVRNFDVVSSEFIQILHTGSDHWVCVSSLGCPPGYVHLYDSLYHDVISQEIEEQ 863
Query: 209 INNVLGGEKYISVDIVHPVNEYSS 280
N++LGG IS+D V PV + S+
Sbjct: 864 TNDLLGG-SLISLDFV-PVQQQSN 885
>SB_17436| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 718
Score = 31.5 bits (68), Expect = 0.41
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = -1
Query: 245 PKYIF--HRPTHC*SLLGFVYRLRLCRGRVRTSHPMETTPHSCHHWMYTLP*GVSVRLYR 72
P+YI H C G+ + + L +GR RT +E C+ TLP G Y
Sbjct: 389 PRYIGPNHYQIVCDDKSGYDH-INLTQGR-RTLFGLEW--EGCYFVYTTLPFGWKASAYI 444
Query: 71 WHRLGLSVRNRARKYGTPAHQ 9
+H GL N R G P Q
Sbjct: 445 YHSTGLLATNHIRSLGVPCSQ 465
>SB_46020| Best HMM Match : PHD (HMM E-Value=9.3e-12)
Length = 824
Score = 30.7 bits (66), Expect = 0.71
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = +2
Query: 47 ERTALGDA--IDKASLKLLKEAYTSSDDKNVVSSPLGAMFLL----SLYRDGAGKQSQEE 208
+R LG D S + ++ +T SD V S LG + SLY D ++ +E+
Sbjct: 694 QRPTLGRVRNFDVVSSEFIQILHTGSDHW-VCGSTLGCPGYVHLYDSLYHDVISQEIEEQ 752
Query: 209 INNVLGGEKYISVDIVHPVNEYSS 280
N++LGG IS+D V PV + S+
Sbjct: 753 TNDLLGG-SLISLDFV-PVQQQSN 774
>SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 29.1 bits (62), Expect = 2.2
Identities = 35/121 (28%), Positives = 50/121 (41%)
Frame = +2
Query: 32 FGRDYERTALGDAIDKASLKLLKEAYTSSDDKNVVSSPLGAMFLLSLYRDGAGKQSQEEI 211
FGR ER LG + S++ T+ VS+P+ SL RD + SQE +
Sbjct: 401 FGRCSER--LGHSFSTQSIRE-GNCMTNDTLGKSVSTPV---IKDSLSRDVSCHTSQEIL 454
Query: 212 NNVLGGEKYISVDIVHPVNEYSSLSKQFSEMNPDFFTMASKIYVGNQFILNESFKITTRQ 391
+ V E IS D E L Q + + DF + + Q++LN SF
Sbjct: 455 DEVERRESVISGDAYQAGTESQLLQYQMAAVQYDFMS----CHEVRQYLLNASFNAEEEN 510
Query: 392 Y 394
Y
Sbjct: 511 Y 511
>SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43)
Length = 1602
Score = 28.3 bits (60), Expect = 3.8
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = -2
Query: 385 GSDFERFIQNKLIPDVYFTSHSEEIWIHLRKLLA*ATILVDRVYNIHRNIFFTAQHIVDL 206
G E ++++L+ + ++E I R+LL+ + + Y+I ++ TAQH+ DL
Sbjct: 577 GGSLENMLRDRLVSGI----NNERIQ---RRLLSEENLTFKKAYDIASSMETTAQHMADL 629
Query: 205 FLALFT-GSVSVEGE*EHRTQWRRHHILVITGCIRFLKE 92
A T S S + E Q+ + ++ C++ K+
Sbjct: 630 QSAPSTLSSTSASVKKEATCQYCKKKGHIVAKCLKKAKK 668
>SB_20314| Best HMM Match : RVT_1 (HMM E-Value=1e-32)
Length = 1556
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = -2
Query: 385 GSDFERFIQNKLIPDVYFTSHSEEIWIHLRKLLA*ATILVDRVYNIHRNIFFTAQHIVDL 206
G E ++++L+ + ++E I R+LL+ + + Y+I ++ TAQH+ DL
Sbjct: 484 GGSLENMLRDRLVSGI----NNERIQ---RRLLSEENLTFKKAYDIASSMETTAQHMADL 536
Query: 205 FLALFTGSVSVEG 167
A T +V + G
Sbjct: 537 QSAPSTLNVELNG 549
>SB_48461| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 327
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = -2
Query: 385 GSDFERFIQNKLIPDVYFTSHSEEIWIHLRKLLA*ATILVDRVYNIHRNIFFTAQHIVDL 206
G E ++++L+ + ++E I R+LL+ + + Y+I ++ TAQH+ DL
Sbjct: 8 GGSLENMLRDRLVSGI----NNERIQ---RRLLSEENLTFKKAYDIASSMETTAQHMADL 60
Query: 205 FLALFT 188
A FT
Sbjct: 61 QSAPFT 66
>SB_32738| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-13)
Length = 323
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = -3
Query: 345 PTYILLAIVKKSGFISENCLLKLLYSLTGCTISTEIYFSP 226
P ++A+ + SG +SE+ LL +++TGC + T F+P
Sbjct: 257 PFACVVAVFEVSGQLSESLLLA--WNVTGCLVFTNSTFNP 294
>SB_16447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 27.5 bits (58), Expect = 6.6
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = +2
Query: 266 NEYSSLSKQFSEMNPDFFTMASKIYVG 346
N++++ K +++P F+T SK+ +G
Sbjct: 558 NQFAAAGKSTGKLSPSFYTTLSKVLIG 584
>SB_40333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/62 (22%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 77 KASLKLLKEAYTSSDDKNVVSSPLGAMFLLSLY-RDGAGKQSQEEINNVLGGEKYISVDI 253
+ASL L++ T++++ + +++P G ++L DG G + + + E + ++
Sbjct: 39 RASLPRLRQLSTTTEESDDLTAPFGGRHTVTLIPGDGVGPELVNCVKQMFKTELDLFANV 98
Query: 254 VH 259
VH
Sbjct: 99 VH 100
>SB_28995| Best HMM Match : LicD (HMM E-Value=0.018)
Length = 1164
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 147 NGDDTTFLSSLDVYASLRSFSEALSMASPR 58
N D + S +DVY + S+S S+ASPR
Sbjct: 696 NRDIIPYDSDVDVYVDVDSYSTLRSIASPR 725
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,999,817
Number of Sequences: 59808
Number of extensions: 326695
Number of successful extensions: 1003
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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