Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F01
         (503 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    35   0.029
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    35   0.029
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    34   0.067
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    34   0.067
AF036698-1|AAB88352.1|  425|Caenorhabditis elegans Hypothetical ...    29   2.5  
AC024794-6|AAK68493.2|  425|Caenorhabditis elegans Hypothetical ...    29   2.5  

>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 35.1 bits (77), Expect = 0.029
 Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
 Frame = +2

Query: 95  LKEAYTSSDDKNVVSSPLGAMFLLSLYRDGAGKQSQEEINNVLGGEKYISVDIVHPVNEY 274
           LK   T     +VV SPL     L+L   GA   +Q+E+ +VLGG +           E+
Sbjct: 13  LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIF--------EEF 64

Query: 275 SSLSKQFSEMNPDFFT-MASKIYVGNQFILNESFKITTRQ-YESEIDTIDLKDT 430
           S L +   + +    T + ++++V   + +++ +  T  + Y++  +++D   T
Sbjct: 65  SGLMEAVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQT 118


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 35.1 bits (77), Expect = 0.029
 Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
 Frame = +2

Query: 95  LKEAYTSSDDKNVVSSPLGAMFLLSLYRDGAGKQSQEEINNVLGGEKYISVDIVHPVNEY 274
           LK   T     +VV SPL     L+L   GA   +Q+E+ +VLGG +           E+
Sbjct: 13  LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIF--------EEF 64

Query: 275 SSLSKQFSEMNPDFFT-MASKIYVGNQFILNESFKITTRQ-YESEIDTIDLKDT 430
           S L +   + +    T + ++++V   + +++ +  T  + Y++  +++D   T
Sbjct: 65  SGLMEAVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQT 118


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +2

Query: 122 DKNVVSSPLGAMFLLSLYRDGAGKQSQEEINNVLGGEKYISVDIVHPVNEYSSLSKQFSE 301
           ++++V SPL    +LSL   G    S+++I N L             V  +S +SK+   
Sbjct: 21  NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTL----LSGATDEQLVEHFSFVSKEVKN 76

Query: 302 MNPDF-FTMASKIYVGNQFILNESFKITT-RQYESEIDTIDL 421
                   +A+K+Y+   F +N +F  T  + Y ++  ++DL
Sbjct: 77  GTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDL 118


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +2

Query: 122 DKNVVSSPLGAMFLLSLYRDGAGKQSQEEINNVLGGEKYISVDIVHPVNEYSSLSKQFSE 301
           ++++V SPL    +LSL   G    S+++I N L             V  +S +SK+   
Sbjct: 21  NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTL----LSGATDEQLVEHFSFVSKEVKN 76

Query: 302 MNPDF-FTMASKIYVGNQFILNESFKITT-RQYESEIDTIDL 421
                   +A+K+Y+   F +N +F  T  + Y ++  ++DL
Sbjct: 77  GTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDL 118


>AF036698-1|AAB88352.1|  425|Caenorhabditis elegans Hypothetical
           protein B0273.3 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 278 SLSKQFSEMNPDFFTMASKIYVGNQFILNESFKITTRQYESEID 409
           S S  FSE  P F  MA   +  + F ++++F I +   +  +D
Sbjct: 231 SFSDDFSEKKPSFKDMAKNKWPSSMFFIHDTFYIDSNTGDQFVD 274


>AC024794-6|AAK68493.2|  425|Caenorhabditis elegans Hypothetical
           protein Y48G1BM.1 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 278 SLSKQFSEMNPDFFTMASKIYVGNQFILNESFKITTRQYESEID 409
           S S  FSE  P F  MA   +  + F ++++F I +   +  +D
Sbjct: 231 SFSDDFSEKKPSFKDMAKNKWPSSMFFIHDTFYIDSNTGDKFVD 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,897,347
Number of Sequences: 27780
Number of extensions: 250421
Number of successful extensions: 707
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)