Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E24
(312 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86864-1|BAA24070.1| 830|Homo sapiens acetyl LDL receptor protein. 34 0.10
D63483-1|BAA09770.1| 830|Homo sapiens KIAA0149 protein. 34 0.10
BC039735-1|AAH39735.1| 830|Homo sapiens scavenger receptor clas... 34 0.10
AB052950-1|BAC02696.1| 744|Homo sapiens SREC-5 protein. 34 0.10
AB052949-1|BAC02695.1| 337|Homo sapiens SREC-4 protein. 34 0.10
AB052948-1|BAC02694.1| 569|Homo sapiens SREC-3 protein. 34 0.10
AB052947-1|BAC02693.1| 342|Homo sapiens SREC-2 protein. 34 0.10
AB052946-1|BAC02692.1| 830|Homo sapiens SREC protein. 34 0.10
J05046-1|AAC31759.1| 1268|Homo sapiens insulin receptor-related ... 31 0.54
AL158169-3|CAH70009.1| 1297|Homo sapiens insulin receptor-relate... 31 0.54
BC106950-1|AAI06951.1| 685|Homo sapiens delta-like 4 (Drosophil... 31 0.72
AY358894-1|AAQ89253.1| 685|Homo sapiens DLL4 protein. 31 0.72
AF279305-1|AAF81912.1| 653|Homo sapiens delta 4 protein. 31 0.72
AF253468-1|AAF76427.1| 685|Homo sapiens notch ligand DLL4 protein. 31 0.72
AB043894-1|BAB18581.1| 685|Homo sapiens Delta-4 protein. 31 0.72
AB036931-1|BAB16085.1| 685|Homo sapiens notch ligand delta-2 pr... 31 0.72
AK074062-1|BAB84888.1| 1282|Homo sapiens FLJ00133 protein protein. 29 3.8
X90587-1|CAA62215.1| 617|Homo sapiens Rod cGMP phosphodiesteras... 28 5.0
X66142-1|CAA46932.1| 854|Homo sapiens 3',5'-cyclic-nucleotide ... 28 5.0
X62692-1|CAA44569.1| 854|Homo sapiens cGMP phosphodiesterase be... 28 5.0
S41458-1|AAB22690.1| 854|Homo sapiens rod cGMP phosphodiesteras... 28 5.0
BT009794-1|AAP88796.1| 853|Homo sapiens phosphodiesterase 6B, c... 28 5.0
BC000249-1|AAH00249.1| 853|Homo sapiens phosphodiesterase 6B, c... 28 5.0
AF439717-1|AAQ04558.1| 1008|Homo sapiens insulin responsive sequ... 28 5.0
BX640950-1|CAE45974.1| 1042|Homo sapiens hypothetical protein pr... 28 6.7
BX640786-1|CAE45876.1| 1042|Homo sapiens hypothetical protein pr... 28 6.7
BC116458-1|AAI16459.1| 1042|Homo sapiens integrator complex subu... 28 6.7
BC105094-1|AAI05095.1| 1042|Homo sapiens integrator complex subu... 28 6.7
BC105092-1|AAI05093.1| 1042|Homo sapiens integrator complex subu... 28 6.7
AL513523-3|CAH71416.1| 1042|Homo sapiens integrator complex subu... 28 6.7
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 27 8.8
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 27 8.8
BC109204-1|AAI09205.1| 351|Homo sapiens HSPG2 protein protein. 27 8.8
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 27 8.8
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 27 8.8
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 27 8.8
AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-speci... 27 8.8
>D86864-1|BAA24070.1| 830|Homo sapiens acetyl LDL receptor protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 19 EQPCNAFGGKCTEA--ETDCPAGTHITAKGL-CPSQQHRGVECCHSVLR-KIN-TCRSHG 183
+Q C G+C+ A E CP G L CP+ H GV+C HS R K N C
Sbjct: 220 QQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH-GVQCAHSCGRCKHNEPCSPDT 278
Query: 184 GEC 192
G C
Sbjct: 279 GSC 281
>D63483-1|BAA09770.1| 830|Homo sapiens KIAA0149 protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 19 EQPCNAFGGKCTEA--ETDCPAGTHITAKGL-CPSQQHRGVECCHSVLR-KIN-TCRSHG 183
+Q C G+C+ A E CP G L CP+ H GV+C HS R K N C
Sbjct: 220 QQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH-GVQCAHSCGRCKHNEPCSPDT 278
Query: 184 GEC 192
G C
Sbjct: 279 GSC 281
>BC039735-1|AAH39735.1| 830|Homo sapiens scavenger receptor class
F, member 1 protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 19 EQPCNAFGGKCTEA--ETDCPAGTHITAKGL-CPSQQHRGVECCHSVLR-KIN-TCRSHG 183
+Q C G+C+ A E CP G L CP+ H GV+C HS R K N C
Sbjct: 220 QQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH-GVQCAHSCGRCKHNEPCSPDT 278
Query: 184 GEC 192
G C
Sbjct: 279 GSC 281
>AB052950-1|BAC02696.1| 744|Homo sapiens SREC-5 protein.
Length = 744
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 19 EQPCNAFGGKCTEA--ETDCPAGTHITAKGL-CPSQQHRGVECCHSVLR-KIN-TCRSHG 183
+Q C G+C+ A E CP G L CP+ H GV+C HS R K N C
Sbjct: 220 QQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH-GVQCAHSCGRCKHNEPCSPDT 278
Query: 184 GEC 192
G C
Sbjct: 279 GSC 281
>AB052949-1|BAC02695.1| 337|Homo sapiens SREC-4 protein.
Length = 337
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 19 EQPCNAFGGKCTEA--ETDCPAGTHITAKGL-CPSQQHRGVECCHSVLR-KIN-TCRSHG 183
+Q C G+C+ A E CP G L CP+ H GV+C HS R K N C
Sbjct: 220 QQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH-GVQCAHSCGRCKHNEPCSPDT 278
Query: 184 GEC 192
G C
Sbjct: 279 GSC 281
>AB052948-1|BAC02694.1| 569|Homo sapiens SREC-3 protein.
Length = 569
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 19 EQPCNAFGGKCTEA--ETDCPAGTHITAKGL-CPSQQHRGVECCHSVLR-KIN-TCRSHG 183
+Q C G+C+ A E CP G L CP+ H GV+C HS R K N C
Sbjct: 220 QQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH-GVQCAHSCGRCKHNEPCSPDT 278
Query: 184 GEC 192
G C
Sbjct: 279 GSC 281
>AB052947-1|BAC02693.1| 342|Homo sapiens SREC-2 protein.
Length = 342
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 19 EQPCNAFGGKCTEA--ETDCPAGTHITAKGL-CPSQQHRGVECCHSVLR-KIN-TCRSHG 183
+Q C G+C+ A E CP G L CP+ H GV+C HS R K N C
Sbjct: 220 QQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH-GVQCAHSCGRCKHNEPCSPDT 278
Query: 184 GEC 192
G C
Sbjct: 279 GSC 281
>AB052946-1|BAC02692.1| 830|Homo sapiens SREC protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 19 EQPCNAFGGKCTEA--ETDCPAGTHITAKGL-CPSQQHRGVECCHSVLR-KIN-TCRSHG 183
+Q C G+C+ A E CP G L CP+ H GV+C HS R K N C
Sbjct: 220 QQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH-GVQCAHSCGRCKHNEPCSPDT 278
Query: 184 GEC 192
G C
Sbjct: 279 GSC 281
>J05046-1|AAC31759.1| 1268|Homo sapiens insulin receptor-related
receptor protein.
Length = 1268
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 37 FGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECMDRCPENL 216
F G C A CP GT+ C + + HSV + +T H G C+ +CP
Sbjct: 225 FQGACLWA---CPPGTYQYESWRCVTAER--CASLHSVPGRASTFGIHQGSCLAQCPSGF 279
Query: 217 T 219
T
Sbjct: 280 T 280
>AL158169-3|CAH70009.1| 1297|Homo sapiens insulin receptor-related
receptor protein.
Length = 1297
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 37 FGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECMDRCPENL 216
F G C A CP GT+ C + + HSV + +T H G C+ +CP
Sbjct: 254 FQGACLWA---CPPGTYQYESWRCVTAER--CASLHSVPGRASTFGIHQGSCLAQCPSGF 308
Query: 217 T 219
T
Sbjct: 309 T 309
>BC106950-1|AAI06951.1| 685|Homo sapiens delta-like 4 (Drosophila)
protein.
Length = 685
Score = 31.1 bits (67), Expect = 0.72
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Frame = +1
Query: 16 DEQPCNAFGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECM 195
D PC GG C + E G H LCP + G+ C HS L ++ +GG C
Sbjct: 329 DSNPCRN-GGSCKDQED----GYHC----LCPPGYY-GLHCEHSTLSCADSPCFNGGSCR 378
Query: 196 DR---------CPENLTYKNAD 234
+R CP N T N +
Sbjct: 379 ERNQGANYACECPPNFTGSNCE 400
>AY358894-1|AAQ89253.1| 685|Homo sapiens DLL4 protein.
Length = 685
Score = 31.1 bits (67), Expect = 0.72
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Frame = +1
Query: 16 DEQPCNAFGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECM 195
D PC GG C + E G H LCP + G+ C HS L ++ +GG C
Sbjct: 329 DSNPCRN-GGSCKDQED----GYHC----LCPPGYY-GLHCEHSTLSCADSPCFNGGSCR 378
Query: 196 DR---------CPENLTYKNAD 234
+R CP N T N +
Sbjct: 379 ERNQGANYACECPPNFTGSNCE 400
>AF279305-1|AAF81912.1| 653|Homo sapiens delta 4 protein.
Length = 653
Score = 31.1 bits (67), Expect = 0.72
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Frame = +1
Query: 16 DEQPCNAFGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECM 195
D PC GG C + E G H LCP + G+ C HS L ++ +GG C
Sbjct: 297 DSNPCRN-GGSCKDQED----GYHC----LCPPGYY-GLHCEHSTLSCADSPCFNGGSCR 346
Query: 196 DR---------CPENLTYKNAD 234
+R CP N T N +
Sbjct: 347 ERNQGANYACECPPNFTGSNCE 368
>AF253468-1|AAF76427.1| 685|Homo sapiens notch ligand DLL4 protein.
Length = 685
Score = 31.1 bits (67), Expect = 0.72
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Frame = +1
Query: 16 DEQPCNAFGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECM 195
D PC GG C + E G H LCP + G+ C HS L ++ +GG C
Sbjct: 329 DSNPCRN-GGSCKDQED----GYHC----LCPPGYY-GLHCEHSTLSCADSPCFNGGSCR 378
Query: 196 DR---------CPENLTYKNAD 234
+R CP N T N +
Sbjct: 379 ERNQGANYACECPPNFTGSNCE 400
>AB043894-1|BAB18581.1| 685|Homo sapiens Delta-4 protein.
Length = 685
Score = 31.1 bits (67), Expect = 0.72
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Frame = +1
Query: 16 DEQPCNAFGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECM 195
D PC GG C + E G H LCP + G+ C HS L ++ +GG C
Sbjct: 329 DSNPCRN-GGSCKDQED----GYHC----LCPPGYY-GLHCEHSTLSCADSPCFNGGSCR 378
Query: 196 DR---------CPENLTYKNAD 234
+R CP N T N +
Sbjct: 379 ERNQGANYACECPPNFTGSNCE 400
>AB036931-1|BAB16085.1| 685|Homo sapiens notch ligand delta-2
protein.
Length = 685
Score = 31.1 bits (67), Expect = 0.72
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Frame = +1
Query: 16 DEQPCNAFGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECM 195
D PC GG C + E G H LCP + G+ C HS L ++ +GG C
Sbjct: 329 DSNPCRN-GGSCKDQED----GYHC----LCPPGYY-GLHCEHSTLSCADSPCFNGGSCR 378
Query: 196 DR---------CPENLTYKNAD 234
+R CP N T N +
Sbjct: 379 ERNQGANYACECPPNFTGSNCE 400
>AK074062-1|BAB84888.1| 1282|Homo sapiens FLJ00133 protein protein.
Length = 1282
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +1
Query: 16 DEQPCNAFGGKCTEAET----DCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHG 183
D PC GG C + +CP G H K ++ H C R TC+ G
Sbjct: 415 DSDPCFN-GGSCDAHDDSYTCECPRGFH--GKHCEKARPHL---CSSGPCRNGGTCKEAG 468
Query: 184 GECMDRCPENLTYKNAD 234
GE CP T ++ +
Sbjct: 469 GEYHCSCPYRFTGRHCE 485
>X90587-1|CAA62215.1| 617|Homo sapiens Rod cGMP phosphodiesterase
protein.
Length = 617
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 43 GKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECMDR 201
GK TD A +TA GLC HRG + + + + HG ++R
Sbjct: 339 GKLKSYYTDLEAFAMVTA-GLCHDIDHRGTNNLYQMKSQNPLAKLHGSSILER 390
>X66142-1|CAA46932.1| 854|Homo sapiens 3',5'-cyclic-nucleotide
phosphodiesterase protein.
Length = 854
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 43 GKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECMDR 201
GK TD A +TA GLC HRG + + + + HG ++R
Sbjct: 576 GKLKSYYTDLEAFAMVTA-GLCHDIDHRGTNNLYQMKSQNPLAKLHGSSILER 627
>X62692-1|CAA44569.1| 854|Homo sapiens cGMP phosphodiesterase beta
subunit protein.
Length = 854
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 43 GKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECMDR 201
GK TD A +TA GLC HRG + + + + HG ++R
Sbjct: 576 GKLKSYYTDLEAFAMVTA-GLCHDIDHRGTNNLYQMKSQNPLAKLHGSSILER 627
>S41458-1|AAB22690.1| 854|Homo sapiens rod cGMP phosphodiesterase
beta-subunit protein.
Length = 854
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 43 GKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECMDR 201
GK TD A +TA GLC HRG + + + + HG ++R
Sbjct: 576 GKLKSYYTDLEAFAMVTA-GLCHDIDHRGTNNLYQMKSQNPLAKLHGSSILER 627
>BT009794-1|AAP88796.1| 853|Homo sapiens phosphodiesterase 6B,
cGMP-specific, rod, beta (congenital stationary night
bli protein.
Length = 853
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 43 GKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECMDR 201
GK TD A +TA GLC HRG + + + + HG ++R
Sbjct: 576 GKLKSYYTDLEAFAMVTA-GLCHDIDHRGTNNLYQMKSQNPLAKLHGSSILER 627
>BC000249-1|AAH00249.1| 853|Homo sapiens phosphodiesterase 6B,
cGMP-specific, rod, beta (congenital stationary night
bli protein.
Length = 853
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 43 GKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECMDR 201
GK TD A +TA GLC HRG + + + + HG ++R
Sbjct: 576 GKLKSYYTDLEAFAMVTA-GLCHDIDHRGTNNLYQMKSQNPLAKLHGSSILER 627
>AF439717-1|AAQ04558.1| 1008|Homo sapiens insulin responsive
sequence DNA binding protein-1 protein.
Length = 1008
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Frame = +1
Query: 25 PCNA---FGGKCTEAETD-----CPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSH 180
PCN+ F G +A D CP G H K ++ H C R TC+
Sbjct: 159 PCNSDPCFNGGSCDAHDDSYTCECPRGFH--GKHCEKARPHL---CSSGPCRNGGTCKEA 213
Query: 181 GGECMDRCPENLTYKNAD 234
GGE CP T ++ +
Sbjct: 214 GGEYHCSCPYRFTGRHCE 231
>BX640950-1|CAE45974.1| 1042|Homo sapiens hypothetical protein
protein.
Length = 1042
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 56 KLKRTVRLVLTSLRKVFVQVNSIGA*NVVIQF*GKLTPADLTAGNAW 196
KL+ T R L L + V+ +GA V + F ++ D+TA N W
Sbjct: 136 KLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIW 182
>BX640786-1|CAE45876.1| 1042|Homo sapiens hypothetical protein
protein.
Length = 1042
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 56 KLKRTVRLVLTSLRKVFVQVNSIGA*NVVIQF*GKLTPADLTAGNAW 196
KL+ T R L L + V+ +GA V + F ++ D+TA N W
Sbjct: 136 KLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIW 182
>BC116458-1|AAI16459.1| 1042|Homo sapiens integrator complex subunit
3 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 56 KLKRTVRLVLTSLRKVFVQVNSIGA*NVVIQF*GKLTPADLTAGNAW 196
KL+ T R L L + V+ +GA V + F ++ D+TA N W
Sbjct: 136 KLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIW 182
>BC105094-1|AAI05095.1| 1042|Homo sapiens integrator complex subunit
3 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 56 KLKRTVRLVLTSLRKVFVQVNSIGA*NVVIQF*GKLTPADLTAGNAW 196
KL+ T R L L + V+ +GA V + F ++ D+TA N W
Sbjct: 136 KLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIW 182
>BC105092-1|AAI05093.1| 1042|Homo sapiens integrator complex subunit
3 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 56 KLKRTVRLVLTSLRKVFVQVNSIGA*NVVIQF*GKLTPADLTAGNAW 196
KL+ T R L L + V+ +GA V + F ++ D+TA N W
Sbjct: 136 KLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIW 182
>AL513523-3|CAH71416.1| 1042|Homo sapiens integrator complex subunit
3 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 56 KLKRTVRLVLTSLRKVFVQVNSIGA*NVVIQF*GKLTPADLTAGNAW 196
KL+ T R L L + V+ +GA V + F ++ D+TA N W
Sbjct: 136 KLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIW 182
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Frame = +1
Query: 19 EQPCNAFGGKCTEAETD-----CPAG------THITAKGLCPSQQHRGVECCHSVLRKIN 165
++PC GG+C ++E+ CPAG H A P C + +
Sbjct: 3852 DRPCQN-GGQCHDSESSSYVCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRGY 3910
Query: 166 TCRSHGGECMDRCPENLT 219
TCR H G RC E +T
Sbjct: 3911 TCRCHLGRSGLRCEEGVT 3928
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Frame = +1
Query: 19 EQPCNAFGGKCTEAETD-----CPAG------THITAKGLCPSQQHRGVECCHSVLRKIN 165
++PC GG+C ++E+ CPAG H A P C + +
Sbjct: 3850 DRPCQN-GGQCHDSESSSYVCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRGY 3908
Query: 166 TCRSHGGECMDRCPENLT 219
TCR H G RC E +T
Sbjct: 3909 TCRCHLGRSGLRCEEGVT 3926
>BC109204-1|AAI09205.1| 351|Homo sapiens HSPG2 protein protein.
Length = 351
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Frame = +1
Query: 19 EQPCNAFGGKCTEAETD-----CPAG------THITAKGLCPSQQHRGVECCHSVLRKIN 165
++PC GG+C ++E+ CPAG H A P C + +
Sbjct: 85 DRPCQN-GGQCHDSESSSYVCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRGY 143
Query: 166 TCRSHGGECMDRCPENLT 219
TCR H G RC E +T
Sbjct: 144 TCRCHLGRSGLRCEEGVT 161
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Frame = +1
Query: 19 EQPCNAFGGKCTEAETD-----CPAG------THITAKGLCPSQQHRGVECCHSVLRKIN 165
++PC GG+C ++E+ CPAG H A P C + +
Sbjct: 3850 DRPCQN-GGQCHDSESSSYVCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRGY 3908
Query: 166 TCRSHGGECMDRCPENLT 219
TCR H G RC E +T
Sbjct: 3909 TCRCHLGRSGLRCEEGVT 3926
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Frame = +1
Query: 19 EQPCNAFGGKCTEAETD-----CPAG------THITAKGLCPSQQHRGVECCHSVLRKIN 165
++PC GG+C ++E+ CPAG H A P C + +
Sbjct: 3850 DRPCQN-GGQCHDSESSSYVCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRGY 3908
Query: 166 TCRSHGGECMDRCPENLT 219
TCR H G RC E +T
Sbjct: 3909 TCRCHLGRSGLRCEEGVT 3926
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Frame = +1
Query: 19 EQPCNAFGGKCTEAETD-----CPAG------THITAKGLCPSQQHRGVECCHSVLRKIN 165
++PC GG+C ++E+ CPAG H A P C + +
Sbjct: 3829 DRPCQN-GGQCHDSESSSYVCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRGY 3887
Query: 166 TCRSHGGECMDRCPENLT 219
TCR H G RC E +T
Sbjct: 3888 TCRCHLGRSGLRCEEGVT 3905
>AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-specific
heparan sulfate proteoglycan core protein precursor
protein.
Length = 2331
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Frame = +1
Query: 19 EQPCNAFGGKCTEAETD-----CPAG------THITAKGLCPSQQHRGVECCHSVLRKIN 165
++PC GG+C ++E+ CPAG H A P C + +
Sbjct: 1790 DRPCQN-GGQCHDSESSSYVCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRGY 1848
Query: 166 TCRSHGGECMDRCPENLT 219
TCR H G RC E +T
Sbjct: 1849 TCRCHLGRSGLRCEEGVT 1866
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,901,863
Number of Sequences: 237096
Number of extensions: 737074
Number of successful extensions: 1874
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1869
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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