Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E23
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 29 3.4
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 29 3.4
AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical ... 28 5.9
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 24 6.5
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 24 6.5
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical
protein F18F11.4 protein.
Length = 550
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 285 MVVIDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHMN--YPYWMTDEVYGLNKERQGE 458
+V D R LSED + + T ++ + +YYLH+ + + V N
Sbjct: 384 VVHFDMHSVYRNELSEDKTHQHTTIEIYDSLNLYYLHLRRFERHLLNPPVVKYNNRFNSS 443
Query: 459 ILMYANSQLLARL--RME 506
+LM N+++L + RME
Sbjct: 444 LLMKLNTKMLDQFTERME 461
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical protein
Y48A6B.11b protein.
Length = 949
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 294 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 467
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 881 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical protein
Y48A6B.11a protein.
Length = 947
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 294 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 467
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 879 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 294 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 467
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 881 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 294 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 467
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 879 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936
>AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical
protein F37B4.7 protein.
Length = 424
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 294 IDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHM 398
++W++ + L +++ E VD ++YM YL M
Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 24.2 bits (50), Expect(2) = 6.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 505 NVYHTKCATLKCSCG 549
N+ T C+T+KCS G
Sbjct: 335 NIQITPCSTMKCSAG 349
Score = 21.8 bits (44), Expect(2) = 6.5
Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +1
Query: 523 CATLKCSCGMNPSRTVIG-LRSGCP 594
CAT++CS G ++ ++ CP
Sbjct: 381 CATMRCSAGTTCQEALVKCAKAPCP 405
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 24.2 bits (50), Expect(2) = 6.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 505 NVYHTKCATLKCSCG 549
N+ T C+T+KCS G
Sbjct: 270 NIQITPCSTMKCSAG 284
Score = 21.8 bits (44), Expect(2) = 6.5
Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +1
Query: 523 CATLKCSCGMNPSRTVIG-LRSGCP 594
CAT++CS G ++ ++ CP
Sbjct: 316 CATMRCSAGTTCQEALVKCAKAPCP 340
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 198 NKAFMMKMTKAATDPVLMNYYGIKVTDKSMVVIDWRKGVRR 320
+K K+T+ + + L Y+ KV D V D + VRR
Sbjct: 14 SKPTAQKLTEESDEKTLRKYFSTKVDDAQQKVADKSQNVRR 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,916,458
Number of Sequences: 27780
Number of extensions: 251996
Number of successful extensions: 681
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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