Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E22
(358 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15683| Best HMM Match : Y_phosphatase (HMM E-Value=0) 30 0.64
SB_52620| Best HMM Match : Y_phosphatase (HMM E-Value=9.3e-06) 29 1.5
SB_45383| Best HMM Match : HDV_ag (HMM E-Value=1.9) 29 1.5
SB_54099| Best HMM Match : Y_phosphatase (HMM E-Value=1.3) 28 1.9
SB_50464| Best HMM Match : Y_phosphatase (HMM E-Value=1.3) 28 1.9
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.9
SB_5167| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.9
SB_22572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44) 27 4.5
SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3) 27 5.9
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.8
SB_15844| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-23) 26 7.8
SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6) 26 7.8
>SB_15683| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 753
Score = 29.9 bits (64), Expect = 0.64
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 14 IETSE--MILTITVLSALVTQASLTPLSNLTVAFINYEELSPLNNINSYE 157
++TSE + + + VL ALV ++ P N+ A + +L N++ YE
Sbjct: 700 VQTSEQYVFIHLAVLEALVCGSTDIPADNMKAAMVRLSKLRTPGNVSGYE 749
>SB_52620| Best HMM Match : Y_phosphatase (HMM E-Value=9.3e-06)
Length = 324
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 14 IETSE--MILTITVLSALVTQASLTPLSNLTVAFINYEELSPLNNINSYEQLYDSVVV 181
++TSE + + + VL ALV ++ P N+ A +L N++ YE + + V
Sbjct: 246 VQTSEQYVFIHLAVLEALVCGSTDIPADNMKAAMARLSKLRTPENVSGYEAEFQRLSV 303
>SB_45383| Best HMM Match : HDV_ag (HMM E-Value=1.9)
Length = 444
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 NLTVAFINYEELSPLNNINSYEQLYDSVVVGDYKAAVMKTLRLENDGQGQVINLVVNRLL 271
NLT L + + N + Q YD + + +A + E D G I N+ L
Sbjct: 8 NLTGKLCQEVRLEGVGSGNPFAQPYDGIKLSSMRAKAADEMADEGDDAGAAIVQARNKFL 67
Query: 272 SEG-KRNIVE 298
++ K+N++E
Sbjct: 68 TQVLKKNMIE 77
>SB_54099| Best HMM Match : Y_phosphatase (HMM E-Value=1.3)
Length = 97
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 14 IETSE--MILTITVLSALVTQASLTPLSNLTVAFINYEELSPLNNINSYE 157
++TSE + + + VL ALV ++ P N+ A +L N++ YE
Sbjct: 43 VQTSEQYVFIHLAVLEALVCGSTDIPADNMKAAMARLSKLRTPGNVSGYE 92
>SB_50464| Best HMM Match : Y_phosphatase (HMM E-Value=1.3)
Length = 96
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 14 IETSE--MILTITVLSALVTQASLTPLSNLTVAFINYEELSPLNNINSYE 157
++TSE + + + VL ALV ++ P N+ A +L N++ YE
Sbjct: 43 VQTSEQYVFIHLAVLEALVCGSTDIPADNMKAAMARLSKLRTPENVSGYE 92
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 28 NDFNDNGAECTGDASVPYTSK 90
N FN N AEC PYTSK
Sbjct: 1395 NMFNGNSAECKNKHGQPYTSK 1415
>SB_5167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 4 TTANRDQRNDFNDNGAECTG 63
T NRD+R DF DNG +G
Sbjct: 16 TDKNRDERKDFKDNGKRQSG 35
>SB_22572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 27.1 bits (57), Expect = 4.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 55 CTGDASVPYTSKQPHGCIY*LRRAFATQ*HQLLRTVVRQCSCRRLQGCS 201
C+G V Y + P+GC F+ HQLL V + C + GCS
Sbjct: 395 CSGGYYVYYL-RPPYGCSMAYCAGFSG--HQLLELVTQGKRCVTMNGCS 440
>SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44)
Length = 552
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +2
Query: 152 YEQLYDSVVVGDYKAAVMKTLRLENDGQGQVINLVVNRLLSEGKRNIVEYAYKLWNMFGT 331
+ QL + ++ Y + +KT+R+E+D L + LL ++Y K F +
Sbjct: 252 FRQLQEPLLTNTYHDSFIKTMRIEDDNTRTKAMLYICLLLPLAHLQALKYTMKFLAEFAS 311
Query: 332 NIVK 343
+ K
Sbjct: 312 HSEK 315
>SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3)
Length = 260
Score = 26.6 bits (56), Expect = 5.9
Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +1
Query: 1 ETTA--NRDQRND--FN--DNGAE-CTGDASVPYTSKQPHGCIY*LRRAFATQ*HQLLRT 159
ETTA N + RN+ F D AE C+G V Y + P+GC A HQLL
Sbjct: 110 ETTACVNVNNRNNGCFRSIDMCAEMCSGGYYVYYL-RPPYGCSM-AYCAGRFSGHQLLEL 167
Query: 160 VVRQCSCRRLQGCS 201
V R C + GCS
Sbjct: 168 VTRGKRCVTMNGCS 181
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 26.6 bits (56), Expect = 5.9
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Frame = +2
Query: 11 RIETSEMILTITVLSALVTQASLTPL-SNLTVAFINYEELSPLNNINSYEQ-----LYDS 172
RI + I T L ++ Q + SN+ VA ++L + + S + + DS
Sbjct: 2089 RISFDDQISNTTALKHMLNQTERSRGGSNIGVAIAALKQLFASDAVRSNARKVLVIMTDS 2148
Query: 173 VVVGDYKAAVMKTLRLENDG 232
GD AA LENDG
Sbjct: 2149 QATGDLNAAKAAAKELENDG 2168
>SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 55 CTGDASVPYTSKQPHGCIY*LRRAFATQ*HQLLRTVVRQCSCRRLQGCS 201
C+G V Y + P+GC A HQLL V R+ C + GC+
Sbjct: 135 CSGGYYVYYL-RPPYGCSM-AYCAGRFSGHQLLELVTRKKRCVTMNGCA 181
>SB_15844| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-23)
Length = 343
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 90 LRGVRDACVTSALSTVIVKIISLVSI 13
+ G+ + C+TSA+S V I+S + I
Sbjct: 85 ITGLNEVCITSAVSLKFVSIVSALHI 110
>SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6)
Length = 288
Score = 26.2 bits (55), Expect = 7.8
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 55 CTGDASVPYTSKQPHGCIY*LRRAFATQ*HQLLRTVVRQCSCRRLQGCS 201
C+G V Y + P+GC A HQLL V R C + GCS
Sbjct: 118 CSGGYYVYYL-RPPYGCSM-AYCAGRFSGHQLLELVTRGKRCVTMNGCS 164
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,911,069
Number of Sequences: 59808
Number of extensions: 162439
Number of successful extensions: 482
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 560496285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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