Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E21
(617 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 36 0.034
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 33 0.18
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 32 0.32
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 31 0.73
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 31 0.97
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 30 1.3
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 29 2.2
03_01_0249 - 1935355-1935827,1936129-1936330 29 3.0
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 29 3.9
09_04_0448 + 17692650-17692970,17693461-17693811 28 5.2
08_02_0011 - 11234393-11235348,11235364-11235700 28 6.8
08_02_0009 + 11216532-11218687,11220727-11225998 28 6.8
08_02_0008 + 11212351-11214506,11214548-11214584 28 6.8
08_02_0007 + 11208170-11210325,11210367-11210403 28 6.8
08_02_0003 + 11180421-11180757,11180773-11185715 28 6.8
08_02_0002 + 11173365-11173512,11173528-11178470 28 6.8
07_03_1781 + 29468919-29468951,29469057-29469184,29469349-294694... 28 6.8
04_01_0559 - 7175828-7176195,7176262-7176973,7178028-7178201,717... 28 6.8
07_03_1615 - 28157237-28157472,28157649-28157728,28157853-281580... 27 9.0
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535... 27 9.0
03_06_0489 - 34284301-34284336,34285104-34285227,34285307-342853... 27 9.0
03_02_0122 - 5742530-5743705 27 9.0
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 35.5 bits (78), Expect = 0.034
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 108 LLSYGGQDFE----DHRVLSADWPDFKPSTPFAQMPVLVIDGKQYAQSTAICRYLGRKYG 275
+L+ G DF+ D R + P F PF Q+PVL + +S AI RY+ KY
Sbjct: 25 VLNEKGLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYK 84
Query: 276 IAGAN 290
GA+
Sbjct: 85 AEGAD 89
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 33.1 bits (72), Expect = 0.18
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 165 PDFKPSTPFAQMPVLVIDGKQYAQSTAICRYLGRKY--GIAGANEEESFEIDQNVEFLHD 338
P+ PF ++PVL QS AI RY+ RKY G E S E V+ D
Sbjct: 44 PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMVDVWLD 103
Query: 339 IRA 347
+ A
Sbjct: 104 VEA 106
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +3
Query: 102 RMLLSYGGQDFEDHRVLSADWPDFKPSTPFAQMPVLVIDGKQYAQSTAICRYLGRKY 272
R++L+ G D+E V PD++ P +P LV + S AI YL KY
Sbjct: 21 RIVLNLKGVDYEYKSVNPRTDPDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKY 77
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 31.1 bits (67), Expect = 0.73
Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
Frame = +3
Query: 138 DHRVLSADWPDFKPSTPFAQMPVLVIDGKQYAQSTAICRYLGRKYGIAGA------NEEE 299
D + + P+ PF QMP +S A+ RY+ RKY + A N E
Sbjct: 35 DFKAMEHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTE 94
Query: 300 SFEIDQNVEF-LHDIRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGH 476
+ +D +E +H +S+ YE A + V + LEK+ +++
Sbjct: 95 AAMVDIGIEVEIHQYYPVISSIVYECLFN-PAMYGVPTNQKVVDNSLEKLKKVLEVYEAR 153
Query: 477 IAAGKLTWGDFV 512
++ G+F+
Sbjct: 154 LSQNTYLAGNFL 165
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 165 PDFKPSTPFAQMPVLVIDGKQYAQSTAICRYLGRKY 272
PD PF Q+P +S AICRY+ RK+
Sbjct: 44 PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKH 79
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 30.3 bits (65), Expect = 1.3
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Frame = +3
Query: 138 DHRVLSADWPDFKPSTPFAQMPVLVIDGKQYA-QSTAICRYLGRKYGIAGA------NEE 296
D V+ P+ PF Q+P DG Y +S AI +Y+ RKY A N
Sbjct: 35 DFTVMEHKSPEHLKRNPFGQIPAFQ-DGDLYLFESRAIGKYILRKYKTREADLLREGNLR 93
Query: 297 ESFEIDQNVEF-LHDIRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNG 473
E+ +D E H + + + YE A + + V + EK+ +++
Sbjct: 94 EAAMVDVWTEVETHQYNSAISPIVYECIIN-PAMRGIPTNQKVVDESAEKLKKVLEVYEA 152
Query: 474 HIAAGKLTWGDFV 512
++ GDFV
Sbjct: 153 RLSQSTYLAGDFV 165
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 29.5 bits (63), Expect = 2.2
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Frame = +3
Query: 186 PFAQMPVLVIDGKQYAQSTAICRYLGRKYG---IAGANEEESFEID--QNVEFLHDIRAK 350
PF Q+P +S AI +Y+ RK+G + +N ES +D VE H A
Sbjct: 51 PFGQVPAFEDGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVESSHFDGAM 110
Query: 351 SASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGDFV 512
S +F + D V + LEK+ ++ ++ K GDF+
Sbjct: 111 SPIIFQCFIVPMFMGGATDI--GVVNESLEKLKKALEVYEAQLSKSKYLAGDFI 162
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 165 PDFKPSTPFAQMPVLVIDGKQYAQSTAICRYLGRKYGIAG 284
P F PF Q+P +S AICRY+ +Y +G
Sbjct: 45 PSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSG 84
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -3
Query: 507 SHPMSTSQQRCVRYSSL*--WRESSPAYRGIRFSRSPHVSSPSV--LHQPRRTPMRTWR 343
S +S+S Q VR S+L WR A + +RSP +S P V + R +RT+R
Sbjct: 433 SSSVSSSSQPVVRTSALSRAWRRRWAALPSVDLARSPGISEPDVDAILLRRPAALRTFR 491
>09_04_0448 + 17692650-17692970,17693461-17693811
Length = 223
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 195 QMPVLVIDGKQYAQSTAICRYL 260
++PVLV DGK A+ST I Y+
Sbjct: 55 KVPVLVHDGKPLAESTVIVEYI 76
>08_02_0011 - 11234393-11235348,11235364-11235700
Length = 430
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 339 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 506
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 340 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 395
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 339 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 506
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 342 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 397
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 339 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 506
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 1056 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 1111
>08_02_0008 + 11212351-11214506,11214548-11214584
Length = 730
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 339 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 506
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 342 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 397
>08_02_0007 + 11208170-11210325,11210367-11210403
Length = 730
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 339 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 506
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 342 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 397
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 339 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 506
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 340 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 395
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 339 IRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGD 506
IR K + E K KK+ED A ++ + + H ++N G I + + W +
Sbjct: 277 IRDKELYFYRELARVKKVKKNEDMAVEIFKNQEQDKHDKEEQNLGKILSEEEQWAE 332
>07_03_1781 +
29468919-29468951,29469057-29469184,29469349-29469433,
29469771-29469824,29470072-29470163,29470280-29470383,
29470811-29470886,29471231-29471678,29471874-29471916,
29471977-29472209,29472302-29472505,29472595-29472693,
29472789-29472861,29473373-29473500,29473614-29473836,
29473992-29474215,29474296-29474423,29475053-29475167,
29475603-29475658,29475795-29475888,29475966-29476152,
29476229-29476309,29476384-29476484,29476567-29476629,
29476800-29476907
Length = 1059
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 48 MPKVVFHYFSCKALGESGRMLLSYGGQDFEDHRVLS 155
+P +V H+ S A G L YGG D VL+
Sbjct: 305 LPVIVLHWSSRSADSNKGGHLFVYGGDDMGSEEVLT 340
>04_01_0559 -
7175828-7176195,7176262-7176973,7178028-7178201,
7178814-7178891
Length = 443
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 150 LSADWPDFKPSTPFAQMPVLVIDGKQYAQSTAICRYLGRKYGIAGAN----EEESFEIDQ 317
++A W + + Q P+ DGK++ T C + KYG N E E + D
Sbjct: 1 MAAGWESYLGAEFHNQDPISRTDGKKFQPRTEQCSMVRIKYGPNRQNIQEVEVEPPKTDS 60
Query: 318 NVEFLHDIRAKSASV 362
V+F+ + K ++
Sbjct: 61 LVKFMQNFLEKDTTM 75
>07_03_1615 -
28157237-28157472,28157649-28157728,28157853-28158009,
28158379-28158565,28158646-28158772,28159218-28159805,
28159898-28160443,28161579-28161620,28162081-28162145,
28162273-28162377,28162682-28162741,28163149-28163237,
28163611-28163732,28163862-28163968,28164041-28164111,
28164377-28164470,28165010-28165247,28166112-28166347
Length = 1049
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 291 EEESFEIDQNVEFLHDIRAKSASVFYEADEELKAKKHEDFA 413
+EE + + HD K++ EA EE +AK+ FA
Sbjct: 802 QEELLSRQEQIRHAHDDLMKNSESILEAQEEFRAKQASIFA 842
>04_04_1122 +
31052497-31052629,31053133-31053191,31053285-31053579,
31054099-31054279,31054739-31054956,31055522-31055739,
31055842-31055958,31056106-31056128,31056223-31056438,
31056536-31056677,31056822-31057067,31057659-31057856,
31058331-31058379,31060835-31060911,31061266-31061551,
31061661-31061841,31062149-31062344,31062630-31062738,
31062861-31062961,31063155-31063267,31063347-31063442,
31063531-31063746,31063857-31063995,31064087-31064332,
31064605-31064940
Length = 1396
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 378 EELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGH 476
E A + +A+N PD LE+I + +K+N H
Sbjct: 391 EHFAAMSYISYAQNNIPDELERIDSWVKENRLH 423
>03_06_0489 -
34284301-34284336,34285104-34285227,34285307-34285371,
34285472-34285555,34285661-34285789,34285887-34285976,
34286116-34286250,34286939-34286984,34287119-34287225,
34287355-34287412,34287524-34287765
Length = 371
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -1
Query: 587 LKCWIFDLKVWYLEHHL*ILKHTGEYEVTPCQLPSSDVSVILLYDGVNLLQHIGVYV 417
LK W FD+++ YL HL I E V ++P S V + + V++++ + ++
Sbjct: 317 LKRWCFDVELVYLCKHLRI--PMAEVSVNWTEIPGSKVRMTSILHMVHVMEKVRSWI 371
>03_02_0122 - 5742530-5743705
Length = 391
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 369 EADEELKAKKHEDFAKNVYPDMLEKIHAIIKKNNGHIAAGKLTWGDFV 512
E +++ K KKH + ++ D L+ ++KK G +G GD++
Sbjct: 334 EEEDDKKKKKHGEGSEGGMGDYLKLAQGLMKKQGGEGESGGGGMGDYL 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,540,947
Number of Sequences: 37544
Number of extensions: 347519
Number of successful extensions: 921
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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