Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E21
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   1.4  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   2.4  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           21   7.3  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           21   7.3  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   9.6  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 262 PRYLQIAVLWAYCLPSITKTGIWANGVLGLKS 167
           P++LQ+  LW    P+  +   W  G  G+ S
Sbjct: 652 PKWLQVLALWLNHSPNYDQVTNWYMGWKGMLS 683


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 528 EYLKMMLQIPDLEVKYPAFQETYQQCIDPT 617
           E +  ML+  ++E ++P F   ++ CI  T
Sbjct: 305 EEVNYMLKAKNMENRFPLFTTVHRICIGET 334


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +3

Query: 321 VEFLHDIRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKK 464
           ++FLHD     AS+    +   K  + ++  +N+   MLE +   + K
Sbjct: 97  IDFLHDPGLMEASLIGLVERHKKRGQTKEEFQNLKEVMLEVLRQALGK 144


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +3

Query: 321 VEFLHDIRAKSASVFYEADEELKAKKHEDFAKNVYPDMLEKIHAIIKK 464
           ++FLHD     AS+    +   K  + ++  +N+   MLE +   + K
Sbjct: 97  IDFLHDPGLMEASLIGLVERHKKRGQTKEEFQNLKEVMLEVLRQALGK 144


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 135 EDHRVLSADW 164
           ED+R+L  DW
Sbjct: 74  EDYRILDVDW 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,974
Number of Sequences: 438
Number of extensions: 3794
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)