Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E20
         (427 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   4.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   7.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +3

Query: 6   VCVKAALSTVRVINLIPSIHNRLGTMKKITFAVACLLALSSVYAGDRC 149
           +C K A   V  +N +    + +GT+++      CLL+L   Y  D C
Sbjct: 412 LCEKVAKQLVNSVNCLRE--SFIGTLQR------CLLSLEKTYERDTC 451


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +3

Query: 6   VCVKAALSTVRVINLIPSIHNRLGTMKKITFAVACLLALSSVYAGDRC 149
           +C K A   V  +N +    + +GT+++      CLL+L   Y  D C
Sbjct: 450 LCEKVAKQLVNSVNCLRE--SFIGTLQR------CLLSLEKTYERDTC 489


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 38  RYKFNSINTQSPWNNEENHI 97
           RYK    N    W ++E HI
Sbjct: 178 RYKEEESNENYNWEHKETHI 197


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 258 LQAYANLYLKRSYEYLLSASYFNKLQ 335
           LQ +AN++ K   E  L  +   KLQ
Sbjct: 584 LQPWANVFAKGDMEAFLVKNIIPKLQ 609


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,206
Number of Sequences: 438
Number of extensions: 2182
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)