Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E19
(404 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical pr... 31 0.24
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 30 0.73
U55376-1|AAA98003.1| 434|Caenorhabditis elegans Hypothetical pr... 28 2.2
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical pr... 27 3.9
AF016425-6|AAY86242.1| 104|Caenorhabditis elegans Hypothetical ... 27 3.9
AC024856-1|ABB51172.1| 334|Caenorhabditis elegans Hypothetical ... 27 5.1
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 26 9.0
U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop hel... 26 9.0
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 26 9.0
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 26 9.0
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 26 9.0
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 26 9.0
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 26 9.0
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 26 9.0
>Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical
protein R11H6.2 protein.
Length = 442
Score = 31.5 bits (68), Expect = 0.24
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 189 TGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDADQE 40
TGG + DS T LP H +S L+ LI +++ + N + + D E
Sbjct: 301 TGGVTKDDSFVTPLPVHSLISLLIWLICLVYASIRNSSNTSLGKITGDNE 350
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 29.9 bits (64), Expect = 0.73
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 135 RVSPLLRLILILFDVVTRLFNKHVTAVDADQE 40
R+S L++ILFD++T F KH+ + D++
Sbjct: 416 RMSSNQNLMVILFDIITSPFRKHLDSEQEDED 447
>U55376-1|AAA98003.1| 434|Caenorhabditis elegans Hypothetical
protein F16H11.3 protein.
Length = 434
Score = 28.3 bits (60), Expect = 2.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 248 EPRALSLWFSLPVMGTLTIAPEVPSELI 165
+P + W+S MG+LTIA ++P+ I
Sbjct: 57 KPDGVETWYSKEFMGSLTIASQLPNASI 84
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 234 ELVVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILIL 100
+ V + S +DHSTG DSEST P++S R ++ +
Sbjct: 876 QFVPSLGSVSEVDHSTGEEQSSDSESTTSSLPPKLSLRQRFLVCI 920
>Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical
protein ZK666.7 protein.
Length = 403
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 256 LTNQMKLGAATAGLAY--DNVNGHGATLTKTHIPGF 357
L +MK+ A A +AY DNVNG L++ PG+
Sbjct: 180 LATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215
>AF016425-6|AAY86242.1| 104|Caenorhabditis elegans Hypothetical
protein F59A7.11 protein.
Length = 104
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 28 LVSVLLVGVNSRYVLVEEPGYYIEQYEDQPEQWANSRVRRQAGALTINSDGTS 186
L++ LL + V+ PG + ED + R RR G T+ +DG++
Sbjct: 4 LINSLLFTIAILAVVWGYPGQQADHVEDLTKNRNEPRARRDLGTETVRADGSA 56
>AC024856-1|ABB51172.1| 334|Caenorhabditis elegans Hypothetical
protein Y71G10AR.4 protein.
Length = 334
Score = 27.1 bits (57), Expect = 5.1
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -1
Query: 269 IWLVRSTEPRALSLWFSLPVMGTLTIA 189
+W+VRS E R L+++F + V+ +++A
Sbjct: 169 VWVVRSKESRRLTVYFVISVVVLISMA 195
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -3
Query: 228 VVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDA 49
+V IAS G + +T I ++ + P + +I D+ LFN H T D
Sbjct: 1407 LVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ 1466
Query: 48 DQEN 37
D+++
Sbjct: 1467 DEKS 1470
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -3
Query: 228 VVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDA 49
+V IAS G + +T I ++ + P + +I D+ LFN H T D
Sbjct: 1407 LVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ 1466
Query: 48 DQEN 37
D+++
Sbjct: 1467 DEKS 1470
>U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop helix
protein 14 protein.
Length = 246
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 65 TCLLKSLVTTSNSMRISRSSGLTRGCAGKRVLSLSTLMVPPVLWSR 202
+C + + T+S S + + R + +STL+VPP+ SR
Sbjct: 15 SCKIFQICTSSQSFDLELFNSSLYNLVPIRFVPISTLLVPPIRLSR 60
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 26.2 bits (55), Expect = 9.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 115 PEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 294
P + A++ VRR + TS M +P + LGS+ + + L ++A
Sbjct: 68 PPRLASATVRRTESFNSAPGVSTSAPMYTLPRSSTAVPPPDILGSIPYSARDPLMRSSAD 127
Query: 295 LAYDNVNG 318
L YD + G
Sbjct: 128 LPYDPMTG 135
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 26.2 bits (55), Expect = 9.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 115 PEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 294
P + A++ VRR + TS M +P + LGS+ + + L ++A
Sbjct: 266 PPRLASATVRRTESFNSAPGVSTSAPMYTLPRSSTAVPPPDILGSIPYSARDPLMRSSAD 325
Query: 295 LAYDNVNG 318
L YD + G
Sbjct: 326 LPYDPMTG 333
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 26.2 bits (55), Expect = 9.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 115 PEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 294
P + A++ VRR + TS M +P + LGS+ + + L ++A
Sbjct: 334 PPRLASATVRRTESFNSAPGVSTSAPMYTLPRSSTAVPPPDILGSIPYSARDPLMRSSAD 393
Query: 295 LAYDNVNG 318
L YD + G
Sbjct: 394 LPYDPMTG 401
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -3
Query: 228 VVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDA 49
+V IAS G + +T I ++ + P + +I D+ LFN H T D
Sbjct: 1407 LVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ 1466
Query: 48 DQEN 37
D+++
Sbjct: 1467 DEKS 1470
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -3
Query: 228 VVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDA 49
+V IAS G + +T I ++ + P + +I D+ LFN H T D
Sbjct: 1407 LVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ 1466
Query: 48 DQEN 37
D+++
Sbjct: 1467 DEKS 1470
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 26.2 bits (55), Expect = 9.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 115 PEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 294
P + A++ VRR + TS M +P + LGS+ + + L ++A
Sbjct: 266 PPRLASATVRRTESFNSAPGVSTSAPMYTLPRSSTAVPPPDILGSIPYSARDPLMRSSAD 325
Query: 295 LAYDNVNG 318
L YD + G
Sbjct: 326 LPYDPMTG 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,795,570
Number of Sequences: 27780
Number of extensions: 164649
Number of successful extensions: 394
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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