Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E18
         (385 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.60 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   7.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   7.4  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    20   7.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   9.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   9.7  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +1

Query: 205 CSTGSTPGKDCHVTCNQLLTDDISVAATCAKKI 303
           C  G T GK CH   N    +      TC  KI
Sbjct: 56  CQPGFT-GKYCHENINDCKVNPCENGGTCVDKI 87


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 208 STGSTPGKDCHVTCNQL-LTDDISVAATC-AKKIYKRHKFDAW 330
           +T   P  + HV  +Q  L   +  AAT     +Y RH +++W
Sbjct: 123 ATSQPPTDNSHVHHHQTSLLGKVEGAATHHLGSVYSRHPYESW 165


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 169  DYGLFQINDKYWCSTGSTPGK 231
            DY     +  YW   G+ PGK
Sbjct: 2538 DYFNANFSLNYWIEKGADPGK 2558


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 102 PCRERKRTVYRQNW 143
           PCR R++  +R+N+
Sbjct: 589 PCRPREQLTWRRNF 602


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 102 PCRERKRTVYRQNW 143
           PCR R++  +R+N+
Sbjct: 481 PCRPREQLTWRRNF 494


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 79  SLMSNWVCLVENESGRFTDKIGKVNKN 159
           ++++N VC V      F+ K   +N+N
Sbjct: 188 AMLTNAVCFVPGVVAMFSRKPCSINEN 214


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 79  SLMSNWVCLVENESGRFTDKIGKVNKN 159
           ++++N VC V      F+ K   +N+N
Sbjct: 188 AMLTNAVCFVPGVVAMFSRKPCSINEN 214


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 230 FPGVDPVLHQYL 195
           FPG+DPV+ + L
Sbjct: 124 FPGLDPVVKRRL 135


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 239 WQSFPGVDPVLHQYLSLIWKRP*SRDP 159
           W +  G+  +   Y S++ ++P ++DP
Sbjct: 243 WHAHTGLQKMDGLYGSVVIRQPPAKDP 269


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 239 WQSFPGVDPVLHQYLSLIWKRP*SRDP 159
           W +  G+  +   Y S++ ++P ++DP
Sbjct: 243 WHAHTGLQKMDGLYGSVVIRQPPAKDP 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,665
Number of Sequences: 336
Number of extensions: 1770
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)