Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E18
(385 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0286 + 13915705-13915984,13916478-13917062,13918188-139186... 31 0.24
05_01_0149 + 989698-991797 31 0.31
11_01_0476 - 3672812-3672866,3673356-3673454,3685385-3686340 30 0.72
03_02_0583 + 9635002-9637299 29 1.3
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 28 2.9
08_02_0416 + 16902153-16902430,16903089-16903143,16903174-169032... 27 3.8
06_03_0830 + 25159758-25162460 27 3.8
02_01_0654 + 4860897-4860932,4860973-4861161,4861394-4861597,486... 27 5.1
08_02_1130 + 24517319-24518149,24519374-24519868,24519954-245201... 27 6.7
05_01_0147 - 981697-983739 27 6.7
04_04_0788 + 28064684-28066584,28066692-28066815,28066908-280672... 27 6.7
02_04_0367 + 22399785-22399899,22400911-22401102,22401990-224021... 27 6.7
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 26 8.9
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 26 8.9
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 26 8.9
12_01_0202 - 1513835-1514282,1514506-1514571,1515420-1515508,151... 26 8.9
11_06_0708 + 26475306-26478404 26 8.9
11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166 26 8.9
10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369... 26 8.9
08_02_0625 + 19438768-19438889,19438897-19439065,19439131-194391... 26 8.9
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 26 8.9
>04_03_0286 +
13915705-13915984,13916478-13917062,13918188-13918661,
13918963-13920208,13920282-13920297
Length = 866
Score = 31.5 bits (68), Expect = 0.24
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 127 FTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVTC-NQLLTDDIS 276
FT ++N G D+ ++Q+ D+ +G+ P K C+VTC N+ +T+DI+
Sbjct: 124 FTLGYARLNITGC-DFDIYQVLDQ----SGNVPAKLCNVTCPNRGITEDIA 169
>05_01_0149 + 989698-991797
Length = 699
Score = 31.1 bits (67), Expect = 0.31
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 185 RSMTNTGAAPGPLLERIAT*LVISY*LTTLAWQL 286
RS TNTG P + R+ T +V + L T+ W+L
Sbjct: 401 RSFTNTGRMPELFVMRLGTIMVTGFILATIFWRL 434
>11_01_0476 - 3672812-3672866,3673356-3673454,3685385-3686340
Length = 369
Score = 29.9 bits (64), Expect = 0.72
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 255 LITSHVAILSRSG---PGAAPVFVIDLEEAVVSRSVLIHFTNFVGKPSAFVLDKADPVTH 85
++ +A+L G G A + V+ E V+R+ + HF KP +++ D A PV+
Sbjct: 81 MVVVDLAVLEGHGLEEEGDAELLVLRSGEWTVTRAPVAHFVGRADKPPSWITDMAIPVSE 140
Query: 84 Q 82
+
Sbjct: 141 R 141
>03_02_0583 + 9635002-9637299
Length = 765
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 185 RSMTNTGAAPGPLLERIAT*LVISY*LTTLAWQL 286
R+ TNT P L R+AT +V ++ L T+ W+L
Sbjct: 466 RAFTNTRRTPELFLIRLATVVVTAFILATVFWRL 499
>05_03_0065 -
7953414-7953845,7953963-7954081,7954158-7955990,
7957103-7957559
Length = 946
Score = 27.9 bits (59), Expect = 2.9
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 IGKVNKNGSRDYG--LFQINDKYWCSTGSTPGKDCHVTCNQLLTDDISVAATCAKKIYKR 312
+ V +G R G +F++ D+Y G HV Q++TD+ SV T A + +
Sbjct: 447 LDSVECSGDRKDGKYIFELVDRYIEEIGEQ-----HVV--QVVTDNASVNTTAASLLTAK 499
Query: 313 HKFDAWYGWKNHC 351
W G+ HC
Sbjct: 500 RPSIFWNGYAAHC 512
>08_02_0416 +
16902153-16902430,16903089-16903143,16903174-16903232,
16903565-16903655
Length = 160
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 355 VDSDFSIRTKRQTCGVCKSSLRT 287
V + ++ T+ QTCG K SLRT
Sbjct: 82 VATPHTVETQHQTCGAVKQSLRT 104
>06_03_0830 + 25159758-25162460
Length = 900
Score = 27.5 bits (58), Expect = 3.8
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 106 VENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVTCNQLLTDDISVAA 285
+ ++SG F+ K + K G D Q ++ C T ST + L+ I+VAA
Sbjct: 482 ITDDSGTFSRKHTRSMKLGGIDLNENQCTEEVDCHTKSTLSNSIN------LSTPIAVAA 535
Query: 286 TCAKKIY-KRHKFDAWYGWK 342
+ ++ R F+ GWK
Sbjct: 536 SRTSSVFPARLHFEGELGWK 555
>02_01_0654 +
4860897-4860932,4860973-4861161,4861394-4861597,
4862503-4862604
Length = 176
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -2
Query: 270 VVSQ*LITSHVAILSRSGPGAAPVFVIDLEEAVVSRSVLIHFTNFVGKPSAFVL 109
+V++ L TS V + PG +PV +D+ +V S I ++F+G S+ L
Sbjct: 111 LVAKALTTSAVPYYQATSPGQSPVLALDV--FLVQASANIILSHFLGLASSLEL 162
>08_02_1130 +
24517319-24518149,24519374-24519868,24519954-24520179,
24520267-24520291,24520925-24521234,24521328-24521888
Length = 815
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 43 LVQELRRQGFDESLMSNWVCLVENESGRFTDKIGKVNKNG 162
L +LR G +L W C VE + F +G KNG
Sbjct: 352 LCHKLRSMG---ALRDTWHCTVEEQIAMFLTTVGHHKKNG 388
>05_01_0147 - 981697-983739
Length = 680
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 185 RSMTNTGAAPGPLLERIAT*LVISY*LTTLAWQL 286
R+ TNT P + R+ T +V + L T+ W+L
Sbjct: 382 RAFTNTRRMPELFVMRLGTIMVTGFILATIFWRL 415
>04_04_0788 +
28064684-28066584,28066692-28066815,28066908-28067285,
28067286-28067488,28067615-28067897
Length = 962
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 225 RSGPGAAPVFVIDLEEAVVSRSVLIHFTNFVGKPSAFVLDKADP 94
+S G P L ++ +S LI + +GKP AF D DP
Sbjct: 256 KSFVGKGPPKSGQLRSGLIGKSGLIGLSGPIGKPGAFDDDDDDP 299
>02_04_0367 +
22399785-22399899,22400911-22401102,22401990-22402117,
22402229-22402384,22402948-22403206,22403762-22403836,
22404288-22404610,22405041-22405274,22405355-22405542,
22405734-22405869,22405963-22406071,22406988-22407090,
22407188-22407374,22407467-22407565,22407666-22407724,
22408581-22408686,22408798-22408962
Length = 877
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 115 RSRQGRPSYSSNFHRSLVF*APALIRIW*NVSHRNAKR 2
R+ + P +S F +VF A + I +W + SHR+ +
Sbjct: 587 RANKRDPQFSKLFFVQVVFVAISSIMVWISTSHRSQNK 624
>12_02_0642 +
21454142-21454251,21454683-21454872,21454988-21455069,
21455224-21455802,21455854-21456909,21457133-21457251,
21457369-21457812
Length = 859
Score = 26.2 bits (55), Expect = 8.9
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 IGKVNKNGSRDYG--LFQINDKYWCSTGSTPGKDCHVTCNQLLTDDISVAATCAKKIYKR 312
+ V +G R G +F++ D+Y G HV Q++TD+ SV T A + +
Sbjct: 405 LDSVECSGDRKDGKYIFELVDRYIEEIGEQ-----HVV--QVVTDNASVNTTAASLLTAK 457
Query: 313 HKFDAWYGWKNHC 351
W G HC
Sbjct: 458 RPSIFWNGCAAHC 470
>12_02_0639 +
21443480-21443589,21444022-21444211,21444327-21444408,
21444563-21445054,21445221-21446246,21446470-21446588,
21446706-21447149
Length = 820
Score = 26.2 bits (55), Expect = 8.9
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 IGKVNKNGSRDYG--LFQINDKYWCSTGSTPGKDCHVTCNQLLTDDISVAATCAKKIYKR 312
+ V +G R G +F++ D+Y G HV Q++TD+ SV T A + +
Sbjct: 366 LDSVECSGDRKDGKYIFELVDRYIEEIGEQ-----HVV--QVVTDNASVNTTAASLLTAK 418
Query: 313 HKFDAWYGWKNHC 351
W G HC
Sbjct: 419 RPSIFWNGCAAHC 431
>12_02_0633 +
21402847-21402862,21403143-21404975,21405052-21405170,
21405288-21405722
Length = 800
Score = 26.2 bits (55), Expect = 8.9
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 IGKVNKNGSRDYG--LFQINDKYWCSTGSTPGKDCHVTCNQLLTDDISVAATCAKKIYKR 312
+ V +G R G +F++ D+Y G HV Q++TD+ SV T A + +
Sbjct: 300 LDSVECSGDRKDGKYIFELVDRYIEEIGEQ-----HVV--QVVTDNASVNTTAASLLTAK 352
Query: 313 HKFDAWYGWKNHC 351
W G HC
Sbjct: 353 RPSIFWNGCAAHC 365
>12_01_0202 -
1513835-1514282,1514506-1514571,1515420-1515508,
1518011-1518352
Length = 314
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 355 VDSDFSIRTKRQTCGVCKSSLRT*LPR*C 269
VD D S+ K + G C SS + LP C
Sbjct: 9 VDDDVSVGKKEEEAGYCSSSSISRLPEAC 37
>11_06_0708 + 26475306-26478404
Length = 1032
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +1
Query: 34 RCGLVQELRRQGFDESLMSNWVCLVENESGRFTDKIGKVNKNGSR 168
RC + ++ R+G ++S + NW+ +++ D I V+ GS+
Sbjct: 45 RC-FISDVERRGMEDSSIHNWISRLKDAMYDADDIIDLVSFEGSK 88
>11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166
Length = 940
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +1
Query: 34 RCGLVQELRRQGFDESLMSNWVCLVENESGRFTDKIGKVNKNGSR 168
RC + ++ R+G ++S + NW+ +++ D I V+ GS+
Sbjct: 45 RC-FISDVERRGMEDSSIHNWISRLKDAMYDADDIIDLVSFEGSK 88
>10_08_0848 +
21035446-21035461,21035742-21036233,21036400-21036956,
21037084-21037539,21037886-21038302
Length = 645
Score = 26.2 bits (55), Expect = 8.9
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 IGKVNKNGSRDYG--LFQINDKYWCSTGSTPGKDCHVTCNQLLTDDISVAATCAKKIYKR 312
+ V +G R G +F++ D+Y G HV Q++TD+ SV T A + +
Sbjct: 244 LDSVECSGDRKDGKYIFELVDRYIEEIGEQ-----HVV--QVVTDNASVNTTAASLLTAK 296
Query: 313 HKFDAWYGWKNHC 351
W G HC
Sbjct: 297 RPSIFWNGCAAHC 309
>08_02_0625 +
19438768-19438889,19438897-19439065,19439131-19439174,
19439431-19440061
Length = 321
Score = 26.2 bits (55), Expect = 8.9
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 160 GSRDYGLFQINDKYWCSTGSTPGKDCHVTCNQLLTDDISVAATCAKKIYKRHKFDA 327
G D F + Y TP +C+VT + D ++ A+ IY +K A
Sbjct: 48 GITDIRYFTDSTMYSTEDFLTPSLNCYVTNAYIRIDKVTAVASIDSSIYPSYKKSA 103
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 26.2 bits (55), Expect = 8.9
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 IGKVNKNGSRDYG--LFQINDKYWCSTGSTPGKDCHVTCNQLLTDDISVAATCAKKIYKR 312
+ V +G R G +F++ D+Y G HV Q++TD+ SV T A + +
Sbjct: 300 LDSVECSGDRKDGKYIFELVDRYIEEIGEQ-----HVV--QVVTDNASVNTTAASLLTAK 352
Query: 313 HKFDAWYGWKNHC 351
W G HC
Sbjct: 353 RPSIFWNGCAAHC 365
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,358,098
Number of Sequences: 37544
Number of extensions: 200030
Number of successful extensions: 496
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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