Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E15
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81120-2|CAB03344.2| 426|Caenorhabditis elegans Hypothetical pr... 32 0.33
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 4.1
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 4.1
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 4.1
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 4.1
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 4.1
AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical ... 28 4.1
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 27 9.5
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 27 9.5
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 27 9.5
AF016685-10|AAG24143.2| 195|Caenorhabditis elegans Hypothetical... 27 9.5
>Z81120-2|CAB03344.2| 426|Caenorhabditis elegans Hypothetical
protein T12D8.4 protein.
Length = 426
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 148 ADVQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPD 327
A + VP YT+ ++ S G + + K ++ + +R+ +VG ++ D
Sbjct: 98 AGIHQVPFSYTLPKSLPSSFEGEFGHIRYTCKAICERPWDFDIVSRKAFTVVGIEDINSD 157
Query: 328 DTFSQPLNCGEPNNAVT 378
++P C E N+AVT
Sbjct: 158 PKLNEPATCVESNHAVT 174
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 388 HAKELDRQTVSYPWTAPKDLEGDVVFKVTIVTSYAVFWVGIESAPVKV 531
HA + +V W AP+ G VVF+ +++ + +++ E VK+
Sbjct: 125 HANLKSKTSVHMMWKAPEVSSGCVVFRASVIETKYIWFTEAEGLTVKL 172
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 1928 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1978
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2457 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2507
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2138 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2188
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 1928 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1978
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2457 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2507
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2138 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2188
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 175 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 1347 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1397
>AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical
protein F33D4.4 protein.
Length = 360
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 102 GGVSAGKRHHRCNCYYVSEHHLFYKFQ 22
GG+ G H C ++VSEH++F K Q
Sbjct: 215 GGLVLGMGLHPCAGHFVSEHYVFKKDQ 241
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -3
Query: 270 DAGHFVFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
D VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 4000 DCDKSVFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4042
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 255 VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 3997 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4034
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 255 VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 4008 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4045
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 255 VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 4008 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4045
>AF016685-10|AAG24143.2| 195|Caenorhabditis elegans Hypothetical
protein F59E11.7a protein.
Length = 195
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 12 DDLPEIYRKDDVHLRSSSCIG 74
DD+ Y K+ +LRSS CIG
Sbjct: 170 DDMTRRYEKEAANLRSSICIG 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,240,601
Number of Sequences: 27780
Number of extensions: 326574
Number of successful extensions: 828
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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