Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E14
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF417882-1|ABN50335.1|  122|Homo sapiens immunoglobulin heavy ch...    30   7.5  
BC033686-1|AAH33686.1|  238|Homo sapiens dolichyl pyrophosphate ...    30   7.5  
BC009493-1|AAH09493.2|  237|Homo sapiens DOLPP1 protein protein.       30   7.5  
AY189675-1|AAO34712.1|  238|Homo sapiens dolichyl pyrophosphate ...    30   7.5  
AL592211-5|CAI12369.1|  238|Homo sapiens dolichyl pyrophosphate ...    30   7.5  

>EF417882-1|ABN50335.1|  122|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 122

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +1

Query: 361 ASPWRNYITISTNN*QPRYYFERLTNGLGSIPEFSWYSPIKTGYYPLMTSYYFPFAQRPD 540
           A+P +   TIS ++ +   Y +   N L +     +Y     GYY ++T YY PF   P 
Sbjct: 49  AAPVKGRFTISRDDSKNTLYLQM--NSLKTEDTAVYYCTTDVGYYDILTGYY-PFWGFPY 105

Query: 541 NY 546
           N+
Sbjct: 106 NW 107


>BC033686-1|AAH33686.1|  238|Homo sapiens dolichyl pyrophosphate
           phosphatase 1 protein.
          Length = 238

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +2

Query: 152 HDAKAINYGIVKEEEQYVYYAN-YSNTFLYHNEEQRLN*LYGDIRVPFLLLINSIRMAFL 328
           H A    YG+     Q++++ + YS  FLY    Q  N  + D+    +L +  + +AFL
Sbjct: 90  HTAVGTKYGMPSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLAVAFL 149

Query: 329 GAVSERMRNLKHRRGEII 382
            + S R+  L H   +++
Sbjct: 150 VSYS-RVYLLYHTWSQVL 166


>BC009493-1|AAH09493.2|  237|Homo sapiens DOLPP1 protein protein.
          Length = 237

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +2

Query: 152 HDAKAINYGIVKEEEQYVYYAN-YSNTFLYHNEEQRLN*LYGDIRVPFLLLINSIRMAFL 328
           H A    YG+     Q++++ + YS  FLY    Q  N  + D+    +L +  + +AFL
Sbjct: 89  HTAVGTKYGMPSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLAVAFL 148

Query: 329 GAVSERMRNLKHRRGEII 382
            + S R+  L H   +++
Sbjct: 149 VSYS-RVYLLYHTWSQVL 165


>AY189675-1|AAO34712.1|  238|Homo sapiens dolichyl pyrophosphate
           phosphatase CWH8 protein.
          Length = 238

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +2

Query: 152 HDAKAINYGIVKEEEQYVYYAN-YSNTFLYHNEEQRLN*LYGDIRVPFLLLINSIRMAFL 328
           H A    YG+     Q++++ + YS  FLY    Q  N  + D+    +L +  + +AFL
Sbjct: 90  HTAVGTKYGMPSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLAVAFL 149

Query: 329 GAVSERMRNLKHRRGEII 382
            + S R+  L H   +++
Sbjct: 150 VSYS-RVYLLYHTWSQVL 166


>AL592211-5|CAI12369.1|  238|Homo sapiens dolichyl pyrophosphate
           phosphatase 1 protein.
          Length = 238

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +2

Query: 152 HDAKAINYGIVKEEEQYVYYAN-YSNTFLYHNEEQRLN*LYGDIRVPFLLLINSIRMAFL 328
           H A    YG+     Q++++ + YS  FLY    Q  N  + D+    +L +  + +AFL
Sbjct: 90  HTAVGTKYGMPSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLAVAFL 149

Query: 329 GAVSERMRNLKHRRGEII 382
            + S R+  L H   +++
Sbjct: 150 VSYS-RVYLLYHTWSQVL 166


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,903,427
Number of Sequences: 237096
Number of extensions: 1981587
Number of successful extensions: 2903
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2903
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)