Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E13
(393 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 33 0.082
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 33 0.082
04_04_0654 + 26968899-26969034,26969613-26969671,26969677-26969784 33 0.082
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 33 0.082
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 33 0.082
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 33 0.082
09_02_0464 - 9591139-9591571,9592601-9592818 32 0.14
06_03_0414 - 20548577-20549006,20553521-20553744 32 0.14
05_07_0127 - 27872803-27873238,27873842-27874059 32 0.14
05_06_0082 - 25425050-25425479,25426551-25426783 32 0.14
05_01_0036 + 253734-253904,255216-255707 32 0.14
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 32 0.19
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 32 0.19
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 32 0.19
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 32 0.19
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 32 0.19
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 31 0.25
03_06_0637 - 35219212-35219754,35220405-35220587 31 0.25
03_05_0601 + 26039326-26039367,26039958-26040035,26040136-260403... 31 0.25
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 31 0.25
01_06_0186 + 27294973-27295211,27295610-27296045 31 0.25
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 31 0.33
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 31 0.33
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 31 0.33
01_06_1343 - 36461476-36461961,36463355-36463519 31 0.33
01_06_0712 + 31397167-31397402,31399823-31400252 31 0.44
10_06_0181 - 11532765-11533203,11536867-11537036 30 0.58
05_03_0286 - 11623575-11624063,11625098-11625262 30 0.58
05_01_0037 - 256891-256998,257347-257502,257753-257824,258737-25... 30 0.58
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 29 1.0
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 29 1.0
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 29 1.0
11_02_0038 - 7631462-7634428,7635975-7636250 29 1.3
06_03_1387 - 29820358-29821035 29 1.3
09_06_0029 + 20336634-20336881,20337737-20338208 29 1.8
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 28 2.3
03_01_0647 + 4745788-4745907,4746510-4746591,4746847-4746958,474... 28 2.3
03_06_0407 - 33714563-33714636,33714966-33715152,33715943-337160... 28 3.1
12_01_0610 + 5030130-5030247,5030957-5033193 27 4.1
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 27 4.1
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 27 4.1
03_06_0408 - 33722741-33722893,33723174-33723350,33723798-337239... 27 4.1
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 27 4.1
11_06_0437 - 23533218-23536382 27 5.4
10_01_0198 - 2158139-2158334,2158517-2158641,2158736-2158789,215... 27 5.4
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 27 5.4
12_01_0824 + 7601811-7602598,7603690-7605730,7605762-7605767,760... 27 7.1
07_03_0922 - 22612773-22613321,22613616-22614189,22614389-226144... 27 7.1
06_02_0196 - 12898050-12898553,12898689-12900824 27 7.1
03_02_0267 + 6990674-6990890,6991692-6991761,6991824-6991913,699... 27 7.1
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 26 9.4
08_02_0718 + 20382323-20385046 26 9.4
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 33.1 bits (72), Expect = 0.082
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFI 377
FK++++G SGVGKS+L+V F+
Sbjct: 20 FKILLIGDSGVGKSSLLVSFV 40
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 33.1 bits (72), Expect = 0.082
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRF 389
K+++LG SGVGKS +V+RF+ +F
Sbjct: 46 KLVLLGDSGVGKSCIVLRFVRGQF 69
>04_04_0654 + 26968899-26969034,26969613-26969671,26969677-26969784
Length = 100
Score = 33.1 bits (72), Expect = 0.082
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 263 CTIIHRHNCRHNLFVSALLNRDHFYKA 183
C+I HRH RHN F + R+H Y A
Sbjct: 23 CSISHRHTGRHNAFSAVGKGREHVYSA 49
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 33.1 bits (72), Expect = 0.082
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK +++G +GVGKS L+++F +RF
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRF 31
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 33.1 bits (72), Expect = 0.082
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRF 389
K+++LG SGVGKS +V+RF+ +F
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQF 56
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 33.1 bits (72), Expect = 0.082
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK +++G +GVGKS L+++F +RF
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRF 31
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G SGVGKS L+ RF F
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEF 37
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G SGVGKS L+ RF F
Sbjct: 15 FKVVLIGDSGVGKSNLLSRFTRNEF 39
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G SGVGKS L+ RF F
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEF 37
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G SGVGKS L+ RF F
Sbjct: 18 FKVVLIGDSGVGKSNLLSRFTKNEF 42
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G SGVGKS L+ RF F
Sbjct: 15 FKVVLIGDSGVGKSNLLSRFTRNEF 39
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK + +G +GVGKS L+++F +RF
Sbjct: 9 FKFVTIGDAGVGKSCLLLQFTDKRF 33
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FK++++G SGVGKS L++RF
Sbjct: 25 FKLLLIGDSGVGKSCLLLRF 44
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FK++++G SGVGKS L++RF
Sbjct: 9 FKLLLIGDSGVGKSCLLLRF 28
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 31.9 bits (69), Expect = 0.19
Identities = 11/24 (45%), Positives = 21/24 (87%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRF 389
KV++LG SGVGK++L+ +++ ++F
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKF 33
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FK++++G SGVGKS L++RF
Sbjct: 9 FKLLLIGDSGVGKSCLLLRF 28
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRFI 392
K+++LG G GKS+LV+RF+ +F+
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFV 37
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G SGVGKS L+ RF F
Sbjct: 19 FKIVLIGDSGVGKSNLLSRFTRNSF 43
>03_05_0601 +
26039326-26039367,26039958-26040035,26040136-26040303,
26040994-26041042,26041502-26041575,26041940-26041948
Length = 139
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRFI 392
K+++LG G GKS+LV+RF+ +F+
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFV 37
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRFI 392
FK++++G S VGKS+L+V F++ I
Sbjct: 13 FKILLIGDSAVGKSSLLVSFVSASHI 38
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 31.5 bits (68), Expect = 0.25
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G SGVGKS L+ RF F
Sbjct: 20 FKVVLIGDSGVGKSNLLSRFARDEF 44
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 31.1 bits (67), Expect = 0.33
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G S VGKS L+ RF F
Sbjct: 19 FKVVLIGDSAVGKSQLLARFARNEF 43
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 31.1 bits (67), Expect = 0.33
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK+++LG S VGKS L+ RF F
Sbjct: 15 FKIVLLGDSSVGKSNLLARFARNEF 39
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 31.1 bits (67), Expect = 0.33
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G SGVGKS ++ RF F
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEF 37
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 31.1 bits (67), Expect = 0.33
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G SGVGKS ++ RF F
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEF 37
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 30.7 bits (66), Expect = 0.44
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK +++G SGVGKS L+ RF F
Sbjct: 19 FKTVLIGDSGVGKSNLLSRFTKNEF 43
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 30.3 bits (65), Expect = 0.58
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G S VGKS ++ RF F
Sbjct: 11 FKVVLIGDSAVGKSQILARFARNEF 35
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 30.3 bits (65), Expect = 0.58
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G SGVGKS ++ RF F
Sbjct: 13 FKMVLIGDSGVGKSNILSRFTRNHF 37
>05_01_0037 -
256891-256998,257347-257502,257753-257824,258737-258784,
259071-259143,259237-259250
Length = 156
Score = 30.3 bits (65), Expect = 0.58
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRFI 392
FK++++G S VGKS L++RF R I
Sbjct: 9 FKLLLIGDSSVGKSCLLLRFAKIRTI 34
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G S VGKS L+ R+ F
Sbjct: 14 FKVVIIGDSAVGKSNLLSRYARNEF 38
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRF 374
K++++G SGVGKS L++RF
Sbjct: 17 KLLLIGDSGVGKSCLLLRF 35
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRF 374
K++++G SGVGKS L++RF
Sbjct: 17 KLLLIGDSGVGKSCLLLRF 35
>11_02_0038 - 7631462-7634428,7635975-7636250
Length = 1080
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +3
Query: 273 SSLAKLVL-YPKQKPFKVMVLGQSGVGKSAL 362
S L +++L + ++K FKV ++G GVGK+ L
Sbjct: 259 SRLVEMILTHREEKAFKVAIVGTGGVGKTTL 289
>06_03_1387 - 29820358-29821035
Length = 225
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+V+G S VGK+ L+ RF F
Sbjct: 8 FKVVVIGDSAVGKTQLLGRFTKDEF 32
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+V+G S VGK+ L+ RF F
Sbjct: 23 FKVVVVGDSAVGKTQLLGRFTKDEF 47
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK+++LG VGK++LV+R++ F
Sbjct: 15 FKLVLLGDGRVGKTSLVLRYVNDVF 39
>03_01_0647 +
4745788-4745907,4746510-4746591,4746847-4746958,
4747607-4747697,4747805-4747969
Length = 189
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
+K++ LG VGK+A++ RF+ +F
Sbjct: 11 YKLVFLGDQAVGKTAIITRFMYDKF 35
>03_06_0407 -
33714563-33714636,33714966-33715152,33715943-33716093,
33716520-33716632,33717022-33717085,33717180-33717391,
33717540-33717621,33717811-33717866,33718004-33718072,
33718524-33718772,33718873-33719049,33719556-33719702,
33719794-33719926,33720093-33720307
Length = 642
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRF 389
+V+V+G G GKS+LVV T F
Sbjct: 17 RVVVIGDPGTGKSSLVVSVATEAF 40
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3
Query: 312 PFKVMVLGQSGVGKSALV 365
P ++++LG++GVGKSA +
Sbjct: 159 PLRILLLGKTGVGKSATI 176
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G G GK+ V R IT F
Sbjct: 442 FKLILVGDGGTGKTTFVKRHITGEF 466
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G G GK+ V R +T F
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEF 38
>03_06_0408 -
33722741-33722893,33723174-33723350,33723798-33723947,
33724085-33724145,33724338-33724558
Length = 253
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRF 389
+V V+G G GKS+LV T RF
Sbjct: 16 RVAVIGDHGTGKSSLVATIATGRF 39
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G G GK+ V R +T F
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEF 38
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 27.1 bits (57), Expect = 5.4
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +3
Query: 297 YPKQKPFKVMVLGQSGVGKSAL 362
+ K++P+K+ ++G G+GK+ L
Sbjct: 209 HKKKEPYKLAIVGTGGIGKTTL 230
>10_01_0198 -
2158139-2158334,2158517-2158641,2158736-2158789,
2159038-2159342,2159677-2159860,2159908-2159999,
2161777-2161885
Length = 354
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALV 365
+V+V+G SGVGKS+LV
Sbjct: 29 RVLVVGDSGVGKSSLV 44
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 27.1 bits (57), Expect = 5.4
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
+K++ LG VGK++++ RF+ +F
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKF 34
>12_01_0824 +
7601811-7602598,7603690-7605730,7605762-7605767,
7606142-7606291
Length = 994
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 264 SPKSSLAKLVLYPKQKPFKVM-VLGQSGVGKSAL 362
SPK L KLV+ ++ KVM ++G G+GK+ L
Sbjct: 169 SPKRELTKLVM-DEETQLKVMSIVGFGGLGKTTL 201
>07_03_0922 -
22612773-22613321,22613616-22614189,22614389-22614466,
22615455-22615504,22616215-22616448
Length = 494
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -3
Query: 295 STSFAKELLGDVLLFIDIIVA 233
+TS KELL D+LLF++ ++A
Sbjct: 339 ATSSTKELLRDILLFVNNVLA 359
>06_02_0196 - 12898050-12898553,12898689-12900824
Length = 879
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 279 LAKLVLYPKQKPFKVMVLGQSGVGKSALV 365
L K V +Q+ V V G SG+GK+ALV
Sbjct: 184 LMKWVKDEEQRRMVVSVWGMSGIGKTALV 212
>03_02_0267 +
6990674-6990890,6991692-6991761,6991824-6991913,
6992635-6992797,6992910-6993137
Length = 255
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKSALVVRFITRR 386
PK + VLG+S VGKS+L+ I R+
Sbjct: 35 PKDDRPEFAVLGRSNVGKSSLINALIRRK 63
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 303 KQKPFKVMVLGQSGVGKSAL---VVRFITRRF 389
K+ VMV+G VGKSAL + R +T RF
Sbjct: 133 KEPTLLVMVVGVPNVGKSALINSIHRIVTSRF 164
>08_02_0718 + 20382323-20385046
Length = 907
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 267 PKSSLAKLVLYPKQKPFKVMVLGQSGVGKSAL 362
PK+ + +L+L +++ + ++G +GVGK+ L
Sbjct: 166 PKAKVTQLLLDEEKQLRVISIIGSAGVGKTTL 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,538,853
Number of Sequences: 37544
Number of extensions: 167894
Number of successful extensions: 411
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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