Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E13
(393 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 48 4e-06
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 42 1e-04
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 42 2e-04
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 41 4e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 41 4e-04
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 40 5e-04
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 5e-04
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 7e-04
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 36 0.015
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 35 0.020
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 35 0.020
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 34 0.036
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 33 0.11
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 32 0.14
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.14
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.19
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 32 0.19
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 31 0.25
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 31 0.25
SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014) 31 0.25
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.25
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 30 0.58
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 30 0.58
SB_55554| Best HMM Match : AAA (HMM E-Value=0.022) 30 0.58
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.58
SB_14536| Best HMM Match : Pox_A32 (HMM E-Value=0.54) 30 0.58
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 30 0.77
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 29 1.0
SB_6076| Best HMM Match : Defensin_beta (HMM E-Value=2) 29 1.0
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 29 1.3
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 29 1.3
SB_51307| Best HMM Match : Pox_A32 (HMM E-Value=0.032) 29 1.8
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 29 1.8
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 29 1.8
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 29 1.8
SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08) 29 1.8
SB_42859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 28 2.3
SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19) 28 2.3
SB_26563| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 28 3.1
SB_3480| Best HMM Match : Cytochrom_NNT (HMM E-Value=4) 28 3.1
SB_6357| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 27 4.1
SB_9110| Best HMM Match : DUF321 (HMM E-Value=4.5) 27 4.1
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 27 5.4
SB_43700| Best HMM Match : SRCR (HMM E-Value=0) 27 5.4
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_20582| Best HMM Match : DAN (HMM E-Value=1.6) 27 5.4
SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 27 5.4
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 27 5.4
SB_35281| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_58248| Best HMM Match : Pox_A32 (HMM E-Value=0.97) 27 7.2
SB_52772| Best HMM Match : rve (HMM E-Value=0.001) 27 7.2
SB_49008| Best HMM Match : AAA (HMM E-Value=0.46) 27 7.2
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_43025| Best HMM Match : Phage_fiber (HMM E-Value=0.35) 27 7.2
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_26683| Best HMM Match : UPF0154 (HMM E-Value=7.3) 27 7.2
SB_15787| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_11398| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=0.82) 27 7.2
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 7.2
SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_11916| Best HMM Match : BRAP2 (HMM E-Value=0.5) 27 7.2
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 27 7.2
SB_42707| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_36311| Best HMM Match : Pox_A32 (HMM E-Value=0.16) 26 9.5
SB_21615| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 26 9.5
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 26 9.5
SB_31604| Best HMM Match : Pox_A32 (HMM E-Value=0.019) 26 9.5
SB_21216| Best HMM Match : Pox_A32 (HMM E-Value=0.01) 26 9.5
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 47.6 bits (108), Expect = 4e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRFI 392
KP +V+VLG+ GVGKSAL VRF+TRRFI
Sbjct: 15 KPVRVVVLGKDGVGKSALTVRFLTRRFI 42
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 42.3 bits (95), Expect = 1e-04
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRFI 392
KV+++G+ GVGKSAL VRF+T+RFI
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFI 887
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRFI 392
+ +V+VLGQ GVGKSAL VR +T+RFI
Sbjct: 15 RSLRVVVLGQDGVGKSALTVRLLTKRFI 42
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 40.7 bits (91), Expect = 4e-04
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRFI 392
K +KV+VLG GVGKSAL V+F+T +F+
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFV 29
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 40.7 bits (91), Expect = 4e-04
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRFI 392
K +KV+VLG GVGKSAL V+F+T +F+
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFV 29
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKSALVVRFITRRFI 392
P +K + ++VLG +GVGK+ALVVRF+T RF+
Sbjct: 321 PSEK-YSMVVLGAAGVGKTALVVRFVTGRFL 350
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +3
Query: 249 MNNSTSPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVVRFITRRFI 392
+NNSTS + +P + + +++LGQ+GVGKSAL+VRF T RFI
Sbjct: 111 LNNSTSTLPNRR----FPL-RDYSLVLLGQAGVGKSALLVRFCTGRFI 153
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +3
Query: 249 MNNSTSPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVVRFITRRFI 392
+ TSP++ + V VLG+ GVGKSA VR +TRRFI
Sbjct: 160 VEKQTSPQAKRRWKSFMTNNRALSVAVLGKDGVGKSAFTVRALTRRFI 207
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 35.5 bits (78), Expect = 0.015
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRFI 392
+++ +LG GVGK+AL+VRF+ RF+
Sbjct: 6 YRIALLGDEGVGKTALLVRFLCHRFL 31
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 35.1 bits (77), Expect = 0.020
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRFI 392
K +K++V+G GVGKSAL ++FI F+
Sbjct: 10 KQYKLVVVGGGGVGKSALTIQFIQSHFV 37
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 35.1 bits (77), Expect = 0.020
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK+++LG+S VGKS+LV+RF+ +F
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQF 46
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 34.3 bits (75), Expect = 0.036
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
F+V+VLG GVGK++LV RFI+ F
Sbjct: 108 FRVVVLGSGGVGKTSLVKRFISGTF 132
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G SGVGKS+L++RF F
Sbjct: 9 FKLLLIGDSGVGKSSLLLRFADDTF 33
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G SGVGKS L+ RF F
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEF 36
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 32.3 bits (70), Expect = 0.14
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRF 389
K++++G+SGVGKS+L++RF F
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTF 33
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FK++++G SGVGKS L++RF
Sbjct: 9 FKLLLIGDSGVGKSCLLLRF 28
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
+K++++G SGVGKS+L+ RF F
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEF 37
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+V+G GVGK++L+ R++ + F
Sbjct: 672 FKVLVIGDLGVGKTSLIKRYVHQFF 696
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 31.5 bits (68), Expect = 0.25
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 294 LYPKQKP-FKVMVLGQSGVGKSALVVRFITRRF 389
LY ++ P FKV++LG++GVGK++L R F
Sbjct: 4 LYAERGPLFKVVLLGEAGVGKTSLFYRLKENHF 36
>SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014)
Length = 399
Score = 31.5 bits (68), Expect = 0.25
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 388 NRRVINLTTNADFPTPDCPRTITLKGF 308
N V N NADFPTP P T TL F
Sbjct: 12 NCPVTNCKVNADFPTPPDPSTTTLYSF 38
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRF 389
K FK++++G S VGK+ L R T +F
Sbjct: 45 KTFKIIIIGDSNVGKTCLAYRLCTGKF 71
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G SGVGKS L+ R+ F
Sbjct: 19 FKIVLIGDSGVGKSNLLSRYTKNEF 43
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 30.3 bits (65), Expect = 0.58
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FKV+VLG VGKS+L+ RF
Sbjct: 11 FKVLVLGDCNVGKSSLIRRF 30
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 30.3 bits (65), Expect = 0.58
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 288 LVLYPKQKPFKVMVLGQSGVGKSALVVRFITRRF 389
LVL K++ K +++G GVGK++L+V ++ F
Sbjct: 10 LVLERKKEQLKCVIVGDGGVGKTSLLVSYMMDGF 43
>SB_55554| Best HMM Match : AAA (HMM E-Value=0.022)
Length = 1681
Score = 30.3 bits (65), Expect = 0.58
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
+ V+++GQSG GKSAL+ ++ R+
Sbjct: 923 YPVLLVGQSGTGKSALIQNMVSPRY 947
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 30.3 bits (65), Expect = 0.58
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FKV+V+G GVGK++L+ RF
Sbjct: 12 FKVLVVGDPGVGKTSLIRRF 31
>SB_14536| Best HMM Match : Pox_A32 (HMM E-Value=0.54)
Length = 470
Score = 30.3 bits (65), Expect = 0.58
Identities = 19/72 (26%), Positives = 40/72 (55%)
Frame = +3
Query: 153 TND*AVNL*RGFIKMISIQQCRDK*IMATIMSMNNSTSPKSSLAKLVLYPKQKPFKVMVL 332
T+D A++ G +++++ + R + TI+S +N T + ++ + + PK PF +++
Sbjct: 101 TDDSAIH--GGGLRLVNTRDAR----VHTILSTDNET--REAMRQRAMDPKNIPFNALIV 152
Query: 333 GQSGVGKSALVV 368
G + GK VV
Sbjct: 153 GPTSCGKIQFVV 164
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 29.9 bits (64), Expect = 0.77
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 306 QKPFKVMVLGQSGVGKSALVVRF 374
++ FKV+ +G SGVGKS+ + RF
Sbjct: 894 ERVFKVVFIGDSGVGKSSFLHRF 916
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 249 MNNSTSPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVVRFITRRF 389
++ T + +L + + PK PF +++G + GK VV ++ F
Sbjct: 628 LSTDTETREALRQRAMDPKNIPFNALIVGSTSCGKIQFVVDWLRGPF 674
>SB_6076| Best HMM Match : Defensin_beta (HMM E-Value=2)
Length = 315
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 382 RVINLTTNADFPTPDCPRTITLKGFCLG 299
R I +TN P CPR IT++ C+G
Sbjct: 204 RSIGRSTNCSGSRPQCPRGITVRPCCMG 231
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 29.1 bits (62), Expect = 1.3
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FK++++G SGVGK+ ++ RF
Sbjct: 10 FKLLLIGDSGVGKTCILFRF 29
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 29.1 bits (62), Expect = 1.3
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 306 QKPFKVMVLGQSGVGKSALVVRFITRRF 389
++ FK+++ G + VGKS+ ++R RF
Sbjct: 440 ERMFKIVLAGDAAVGKSSFILRLCRNRF 467
>SB_51307| Best HMM Match : Pox_A32 (HMM E-Value=0.032)
Length = 1036
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +3
Query: 153 TND*AVNL*RGFIKMISIQQCRDK*IMATIMSMNNSTSPKSSLAKLVLYPKQKPFKVMVL 332
T+D A++ G +++++ + I T NS + + L PK PF +++
Sbjct: 792 TDDTAIH--GGGLRLVNTRDGVHLEIKRTASGSGNSPYNTEHIRRSGLDPKNVPFNTLIM 849
Query: 333 GQSGVGKSALVV 368
G + GK+ VV
Sbjct: 850 GPTSCGKTQFVV 861
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALV 365
FK +++G SGVGKS LV
Sbjct: 351 FKTLIIGNSGVGKSCLV 367
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 252 NNSTSPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVVRFITRRF 389
N S +SSL + K +KV+ G GVGK++L +R +F
Sbjct: 7 NRPYSRQSSLESSANHTKVPLYKVVFAGFRGVGKTSLFLRIRDEKF 52
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 258 STSPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVVRFITRRF 389
S+SPK S L + F ++ G S VGK++L++RF+ F
Sbjct: 16 SSSPKDSETSL------RRFTIVFFGASSVGKTSLILRFLGYAF 53
>SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08)
Length = 340
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALV 365
+ FKV+V+G++GVGKS LV
Sbjct: 59 RTFKVIVVGRTGVGKSHLV 77
>SB_42859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1370
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 261 TSPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
T+ S+L + + PK PF +++G + GK+ VV
Sbjct: 988 TAGGSALRQRGMDPKNNPFNALIVGPTSCGKTQFVV 1023
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFI 377
K++ LG GVGKS+L RFI
Sbjct: 165 KIVFLGDQGVGKSSLAGRFI 184
>SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 90 SCVFCAQQYLFEYF 131
SC+FCA QYLF+ F
Sbjct: 62 SCIFCALQYLFKEF 75
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRFI 392
K K+ V+G VGKS+L ++F+ +F+
Sbjct: 5 KSRKIAVMGFRSVGKSSLTIQFVEGQFV 32
>SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19)
Length = 1562
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 249 MNNSTSPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
++ T + +L + + PK PF +++G + GK+ VV
Sbjct: 972 LSTDTETREALRQRGMDPKNIPFNALIVGPTSCGKTQFVV 1011
>SB_26563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 248 RHNCRHNLFVSALLNRDHFYKATSQ 174
RH+ RH FVSALL +F++ S+
Sbjct: 27 RHHVRHRRFVSALLEVWYFFQGLSK 51
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +3
Query: 153 TND*AVNL*RGFIKMISIQQCRDK*IMATIMSMNNSTSPKSSLAKLVLYPKQKPFKVMVL 332
T+D A+N G +++++ + + I T +S + + + PK PF +++
Sbjct: 1510 TDDSAIN--GGGLRLVNTRDGVNLEIKRTAGGSGSSPYNTEHIRRSGMDPKNVPFNALIM 1567
Query: 333 GQSGVGKSALVV 368
G + GK+ VV
Sbjct: 1568 GPTSCGKTQFVV 1579
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
+K+ +LG GVGK++L+ F +F
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKF 37
>SB_3480| Best HMM Match : Cytochrom_NNT (HMM E-Value=4)
Length = 245
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 248 RHNCRHNLFVSALLNRDHFYKATSQ 174
RH+ RH FVSALL +F++ S+
Sbjct: 168 RHHVRHRRFVSALLEVWYFFQGLSK 192
>SB_6357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1650
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +3
Query: 153 TND*AVNL*RGFIKMISIQQCRDK*IMATIMSMNNSTSPKSSLAKLVLYPKQKPFKVMVL 332
T+D A++ RG +++++ + I T +S + + + PK PF +++
Sbjct: 795 TDDSAIH--RGGLRLVNTRDGVHLEIKRTAGGSGSSPYNTEHIRRSGMDPKNVPFNALIV 852
Query: 333 GQSGVGKSALVV 368
G + GK+ VV
Sbjct: 853 GPTSCGKTQFVV 864
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALV 365
F VMV+G+SG+GKS L+
Sbjct: 25 FTVMVVGESGLGKSTLL 41
>SB_9110| Best HMM Match : DUF321 (HMM E-Value=4.5)
Length = 199
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -2
Query: 377 YKSHN*CRFSNS*LS*DHNFEGLLFRIKYEFR*GTFRRCTIIHRHNCR 234
Y +HN CR + DHN +R+ Y R+ + H HNCR
Sbjct: 112 YYNHN-CRIRKWRVYHDHNSRVRKWRV-YHNHNRRIRKWRVYHNHNCR 157
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 27.1 bits (57), Expect = 5.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALV 365
F +MV+G+SG+GKS L+
Sbjct: 25 FTLMVVGESGLGKSTLI 41
>SB_43700| Best HMM Match : SRCR (HMM E-Value=0)
Length = 967
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -2
Query: 245 HNCRHNLFVSALLNRDHFYKATSQIYSSIVGLTHIFVQKIF 123
HNC HN + +DH + SS+ G IF Q ++
Sbjct: 177 HNCGHNEDAGVICQKDHSVRLVGG-SSSLEGRVEIFYQGVW 216
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRF 389
K++V+G GVGKSA ++ T F
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAF 30
>SB_20582| Best HMM Match : DAN (HMM E-Value=1.6)
Length = 264
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 391 MNRRVINLTTN-ADFPTPDCPRTITL 317
MNR N+T D T DCPRTI L
Sbjct: 187 MNRHFTNMTNFFLDLKTFDCPRTICL 212
>SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 890
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 233 HNLFVSALLNRDHFYKATSQIYSSIVGLTHIFV 135
+NLF++ L+RDHF+ IY ++ T I +
Sbjct: 114 YNLFLNVTLDRDHFH-GKVDIYINVFKATKIII 145
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 264 SPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
+P+ A+ + PK PF +++G + GK+ VV
Sbjct: 783 TPERVSARSGMDPKNMPFNALIVGLTSCGKTQFVV 817
>SB_35281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 391 MNRRVINLTTN-ADFPTPDCPRTITL 317
MNR N+T D T DCPRTI L
Sbjct: 1 MNRHFTNMTNFFLDLKTFDCPRTICL 26
>SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKS 356
P K +VMV+GQ GVGK+
Sbjct: 10 PDVKAVRVMVMGQDGVGKT 28
>SB_58248| Best HMM Match : Pox_A32 (HMM E-Value=0.97)
Length = 540
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 264 SPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
+P+ A+ + PK PF +++G + GK+ VV
Sbjct: 199 TPERVSARSGMDPKNIPFNALIVGPTSCGKTQFVV 233
>SB_52772| Best HMM Match : rve (HMM E-Value=0.001)
Length = 646
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKSALVV 368
PK PF +++G + GK+ LVV
Sbjct: 182 PKNIPFNALIVGPTSCGKTQLVV 204
>SB_49008| Best HMM Match : AAA (HMM E-Value=0.46)
Length = 593
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 264 SPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
+P+ A+ + PK PF +++G + GK+ VV
Sbjct: 187 TPERVSARSGMDPKNIPFNALIVGPTSCGKTQFVV 221
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 273 SSLAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
S A+ + PK PF +++G + GK+ VV
Sbjct: 1219 SGTARYGMDPKNIPFNALIVGPTSFGKTQFVV 1250
>SB_43025| Best HMM Match : Phage_fiber (HMM E-Value=0.35)
Length = 568
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = -1
Query: 228 FICLCTVESRSFL*SHVTNLQLNRWF-----NTYFCSKNIQINIAGHKKHMRV*SQQRNY 64
F LCT + R + + +TN WF + ++ K+ + ++ K+H + +QR +
Sbjct: 163 FARLCTNDYRLGMITRLTNATAENWFKLVKVDDFYRQKHFRPDVFARKQHSNMKGRQRMF 222
Query: 63 I 61
+
Sbjct: 223 L 223
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFI 377
FKV+++G + VGK++ V R++
Sbjct: 23 FKVLIVGDATVGKTSFVQRYV 43
>SB_26683| Best HMM Match : UPF0154 (HMM E-Value=7.3)
Length = 419
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 273 SSLAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
S+ A + PK PF +++G + GK+ LVV
Sbjct: 267 STYAVAGMDPKNIPFNALIVGLTSCGKTQLVV 298
>SB_15787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 227 LFVSALLNRDHFYKATSQIYSSIVGLTHIFVQKIFK 120
L +L +R HF+ + ++GL IF+Q +FK
Sbjct: 342 LQAGSLAHRYHFHNLIDFCHQIVLGLILIFLQPLFK 377
>SB_11398| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=0.82)
Length = 439
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 262 VLLFIDIIVAIIYLSLHC*IEIIF-IKPRHKFTAQSLV*HIFLFKKYSNKYCWAQKTHE 89
V++ I V++I L L C I +I IK + K ++ ++Y KY ++THE
Sbjct: 156 VIIVITCSVSLILLLLLCVIILICKIKKKKKKNEVRMLDEPEALRQYELKYATGEETHE 214
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 222 CLCTVESRSFL*SHVTNLQLNRWFNTYFCSKNIQ 121
C+C +S++ L HV L +N+ N F SK ++
Sbjct: 660 CVCKFQSQNSLSKHVLGLHMNK--NICFSSKEVR 691
>SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1830
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +3
Query: 153 TND*AVNL*RGFIKMISIQQCRDK*IMATIMSMNNSTSPKSSLAKLVLYPKQKPFKVMVL 332
T+D A++ G +++++ + I T NS + + + PK PF +++
Sbjct: 341 TDDSAIH--GGGLRLVNTRDGVHLEIKRTARGTGNSPYNTEHIRRSGMDPKNIPFNALIV 398
Query: 333 GQSGVGKSALVV 368
G + GK+ VV
Sbjct: 399 GLTSCGKTQFVV 410
>SB_11916| Best HMM Match : BRAP2 (HMM E-Value=0.5)
Length = 235
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 246 SMNNSTSPKSS--LAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
S + TSP ++ + + + PK PF +++G + GK+ VV
Sbjct: 141 SSGSDTSPYNTEHIRRSGMDPKNIPFNALIVGPTSCGKTQFVV 183
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 237 TIMSMNNSTSPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
T++SM + S S+ A + PK PF ++G + GK+ +V
Sbjct: 512 TVLSMG-AVSDWSTPATYGMDPKNIPFNAFIVGPTSCGKTRFMV 554
>SB_42707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 294 LYPKQKPFKVMVLGQSGVGKSALVVRFITRR 386
+YPK PF +++G + GK +RFI R
Sbjct: 147 MYPKNIPFNALIVGLTSYGK----IRFIEDR 173
>SB_36311| Best HMM Match : Pox_A32 (HMM E-Value=0.16)
Length = 869
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKSALVV 368
PK PF +++G + GK+ VV
Sbjct: 200 PKNNPFNALIVGPTSCGKTQFVV 222
>SB_21615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 189 IKMISIQQCRDK*IMATIMSMNNSTSPKSSLAKLVLYPKQKPFKVMVLGQ 338
++ +Q CRD+ ++ + TS S+ A+ L P Q + LGQ
Sbjct: 51 VRKSKLQSCRDETASSSSVFFQPETSETSAAAEAALEPFQDIEETSALGQ 100
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 303 KQKPFKVMVLGQSGVGKSALVVRFITRRF 389
K+ K + LG SGVGK++L+ ++ F
Sbjct: 103 KEFLIKFLALGDSGVGKTSLLYQYTDSHF 131
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVR 371
K +KV+++G +GVGKS ++ R
Sbjct: 12 KQYKVVLVGDAGVGKSFVIDR 32
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 249 MNNSTSPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
++ T + L + + PK PF +++G + GK+ +V
Sbjct: 604 LSTDTETREVLRQRGMDPKNIPFDALIVGPTSCGKTQFIV 643
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G S VGK++ + R+ F
Sbjct: 22 FKLLIIGNSAVGKTSFLFRYADDSF 46
>SB_31604| Best HMM Match : Pox_A32 (HMM E-Value=0.019)
Length = 802
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKSALVV 368
PK PF V+++G + GK+ VV
Sbjct: 431 PKNIPFNVLIVGLTSFGKTQFVV 453
>SB_21216| Best HMM Match : Pox_A32 (HMM E-Value=0.01)
Length = 1062
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 264 SPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVV 368
+P+ A+ + PK PF +++G + GK+ VV
Sbjct: 364 TPERVSARSSMDPKNIPFNALIVGPTPCGKTQFVV 398
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,744,935
Number of Sequences: 59808
Number of extensions: 219929
Number of successful extensions: 719
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 678472135
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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