Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E13
(393 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 39 0.001
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 35 0.018
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 35 0.018
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 35 0.018
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 35 0.024
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 34 0.032
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 34 0.032
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 34 0.042
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 33 0.055
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 33 0.055
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 33 0.055
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 33 0.055
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 33 0.055
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 33 0.055
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 33 0.055
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 33 0.073
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 33 0.073
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 33 0.073
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 33 0.096
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 32 0.13
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 32 0.13
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 32 0.13
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 32 0.13
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 32 0.13
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 32 0.17
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 32 0.17
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 32 0.17
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 31 0.29
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 31 0.29
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 31 0.39
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 30 0.51
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 30 0.51
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 30 0.51
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 30 0.51
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 30 0.51
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 30 0.51
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 30 0.51
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 30 0.68
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 29 0.90
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 29 0.90
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 29 0.90
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 29 0.90
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 29 1.6
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 29 1.6
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 29 1.6
U55370-1|AAA97993.3| 313|Caenorhabditis elegans Serpentine rece... 29 1.6
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 29 1.6
AL023844-1|CAA19526.1| 401|Caenorhabditis elegans Hypothetical ... 29 1.6
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 29 1.6
AC024876-11|AAF60895.1| 365|Caenorhabditis elegans Hypothetical... 29 1.6
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 29 1.6
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 28 2.1
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 28 2.1
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 28 2.1
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 28 2.1
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 27 3.6
Z77658-9|CAE17786.2| 201|Caenorhabditis elegans Hypothetical pr... 27 4.8
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical pr... 26 8.4
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 26 8.4
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 26 8.4
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 26 8.4
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 26 8.4
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 26 8.4
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 26 8.4
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 26 8.4
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 26 8.4
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 26 8.4
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 26 8.4
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 26 8.4
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRFI 392
+ FKV+VLG GVGKSAL V+F++ FI
Sbjct: 2 REFKVVVLGSGGVGKSALTVQFVSSTFI 29
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 35.1 bits (77), Expect = 0.018
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK+++LG+S VGKS+LV+RF+ +F
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQF 44
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 35.1 bits (77), Expect = 0.018
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 303 KQKPFKVMVLGQSGVGKSALVVRFITRRF 389
K+ KV++LG SGVGK++L+ +++ RRF
Sbjct: 6 KKALLKVIILGDSGVGKTSLMNQYVNRRF 34
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 35.1 bits (77), Expect = 0.018
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRFI 392
+ +K++VLG GVGKSAL V+F+ F+
Sbjct: 2 REYKIVVLGSGGVGKSALTVQFVQGIFV 29
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 34.7 bits (76), Expect = 0.024
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +3
Query: 303 KQKPFKVMVLGQSGVGKSALVVRFITRRF 389
K FK+++LG+ VGKS+LV+RF+ +F
Sbjct: 9 KSFKFKIVLLGEGCVGKSSLVLRFVENKF 37
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 34.3 bits (75), Expect = 0.032
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G SGVGKS+L++RF F
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTF 35
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.032
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G SGVGKS+L++RF F
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTF 35
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 33.9 bits (74), Expect = 0.042
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRFI 392
K +K++VLG GVGKSAL ++++ F+
Sbjct: 2 KEYKIVVLGNGGVGKSALTLQYVQGIFV 29
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 33.5 bits (73), Expect = 0.055
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRFI 392
+K++V+G GVGKS+L ++F ++F+
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFV 43
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 33.5 bits (73), Expect = 0.055
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRFI 392
+K++V+G GVGKS+L ++F ++F+
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFV 43
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 33.5 bits (73), Expect = 0.055
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRFI 392
+++V+G GVGKSAL ++FI R F+
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFV 43
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 33.5 bits (73), Expect = 0.055
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRFI 392
+++V+G GVGKSAL ++FI R F+
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFV 43
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 33.5 bits (73), Expect = 0.055
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRFI 392
+++V+G GVGKSAL ++FI R F+
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFV 43
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 33.5 bits (73), Expect = 0.055
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRFI 392
+++V+G GVGKSAL ++FI R F+
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFV 43
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.055
Identities = 11/20 (55%), Positives = 20/20 (100%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFI 377
K++++G+SGVGKS+L++RF+
Sbjct: 13 KILIIGESGVGKSSLMLRFV 32
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 33.1 bits (72), Expect = 0.073
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK +++G +GVGKS L+++F +RF
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRF 31
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 33.1 bits (72), Expect = 0.073
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKSALVVRFITRRF 389
P ++ F++++ G + VGKS+ V+R I R+F
Sbjct: 457 PAERTFRIVMCGDAAVGKSSFVMRVIRRQF 486
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 33.1 bits (72), Expect = 0.073
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 321 VMVLGQSGVGKSALVVRFITRRFI 392
V ++G +G GKSA+ V++IT+RFI
Sbjct: 12 VALVGMAGSGKSAIAVKYITKRFI 35
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 32.7 bits (71), Expect = 0.096
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 297 YPKQKPFKVMVLGQSGVGKSALVVRFITRRF 389
Y +++ FKV+++G + VGK+ L RF RF
Sbjct: 95 YKQKRTFKVIIVGNAAVGKTCLSFRFCCGRF 125
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 32.3 bits (70), Expect = 0.13
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRFI 392
+K++V+G GVGKSAL ++ I F+
Sbjct: 4 YKLVVVGDGGVGKSALTIQLIQNHFV 29
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 32.3 bits (70), Expect = 0.13
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G SGVGKS L+ RF F
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEF 36
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 32.3 bits (70), Expect = 0.13
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK +++G +GVGKS L+++F +RF
Sbjct: 7 FKHIIIGDTGVGKSCLLLQFTDKRF 31
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 32.3 bits (70), Expect = 0.13
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRFI 392
+K++V+G GVGKSAL ++ I F+
Sbjct: 7 YKLVVVGDGGVGKSALTIQLIQNHFV 32
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 32.3 bits (70), Expect = 0.13
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FKV+++G SGVGKS L+ RF F
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEF 36
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 31.9 bits (69), Expect = 0.17
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK +++G GVGKS L++RFI + F
Sbjct: 7 FKYVIIGDRGVGKSNLLLRFIGKPF 31
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 31.9 bits (69), Expect = 0.17
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FK++++G SGVGKS L++RF
Sbjct: 12 FKLLLIGDSGVGKSCLLLRF 31
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 31.9 bits (69), Expect = 0.17
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FK++++G SGVGKS L++RF
Sbjct: 12 FKLLLIGDSGVGKSCLLLRF 31
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 31.1 bits (67), Expect = 0.29
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 294 LYPKQKPFKVMVLGQSGVGKSALVVRFITRRF 389
+YP FK +++G GVGKS L++RF F
Sbjct: 1 MYPDHM-FKYVIIGDGGVGKSNLLLRFTDELF 31
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 31.1 bits (67), Expect = 0.29
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 SSLAKLVLYPKQKPF-KVMVLGQSGVGKSALVVRFITRRFI 392
S A L P+Q+ KV+++G GVGKSAL ++F+ F+
Sbjct: 3 SKKASGTLPPQQQVVHKVIMVGTGGVGKSALTLQFMYDEFV 43
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 30.7 bits (66), Expect = 0.39
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRF 389
K KV+V+G+SG GK+AL+ F+ F
Sbjct: 5 KTVKVVVVGESGAGKTALLTCFLDNTF 31
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 30.3 bits (65), Expect = 0.51
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 249 MNNSTSPKSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVVRFITRRFI 392
MN S S AK +Q V VLG VGKSA+V +F+ +F+
Sbjct: 1 MNRSKSVGRRDAKPRGDRRQNKVTVAVLGAERVGKSAMVSQFLWHKFV 48
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 30.3 bits (65), Expect = 0.51
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
+KV+V+G GVGK++++ RF+ F
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVF 36
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 30.3 bits (65), Expect = 0.51
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKSALVVR 371
PK K KV+VLG SGVGK++++ R
Sbjct: 49 PKHKA-KVVVLGDSGVGKTSIIYR 71
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 30.3 bits (65), Expect = 0.51
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRF 389
K FK++ LG+ VGK++L+ RF+ F
Sbjct: 9 KKFKLVFLGEQSVGKTSLITRFMYDSF 35
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 30.3 bits (65), Expect = 0.51
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKSALVVR 371
PK K KV+VLG SGVGK++++ R
Sbjct: 49 PKHKA-KVVVLGDSGVGKTSIIYR 71
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 30.3 bits (65), Expect = 0.51
Identities = 10/18 (55%), Positives = 18/18 (100%)
Frame = +3
Query: 324 MVLGQSGVGKSALVVRFI 377
+++G+SGVGKS+L++RF+
Sbjct: 1 LIIGESGVGKSSLMLRFV 18
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 30.3 bits (65), Expect = 0.51
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
+KV+V+G GVGK++++ RF+ F
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVF 36
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 29.9 bits (64), Expect = 0.68
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G GVGKS L+ RF F
Sbjct: 9 FKIVLIGNPGVGKSNLLSRFTRNEF 33
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 29.5 bits (63), Expect = 0.90
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRF 389
K FK++ LG+ VGK++++ RF+ F
Sbjct: 10 KKFKLVFLGEQSVGKTSIITRFMYDSF 36
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 29.5 bits (63), Expect = 0.90
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKSALVVRF 374
P FK++++G SGVGK+ ++ RF
Sbjct: 5 PYDMLFKLLLIGDSGVGKTCILYRF 29
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 29.5 bits (63), Expect = 0.90
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 300 PKQKPFKVMVLGQSGVGKSALVVRF 374
P FK++++G SGVGK+ ++ RF
Sbjct: 5 PYDMLFKLLLIGDSGVGKTCILYRF 29
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 29.5 bits (63), Expect = 0.90
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRF 389
K FK++ LG+ VGK++++ RF+ F
Sbjct: 10 KKFKLVFLGEQSVGKTSIITRFMYDSF 36
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRFI 392
FK++++G GVGK+ +V RF F+
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFV 36
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FK++++G SGVGK+ ++ RF
Sbjct: 9 FKLLLIGDSGVGKTCVLFRF 28
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 309 KPFKVMVLGQSGVGKSALVVRFITRRF 389
K F+++ LG+ VGK++L+ RF+ F
Sbjct: 9 KKFELVFLGEQSVGKTSLITRFMYDSF 35
>U55370-1|AAA97993.3| 313|Caenorhabditis elegans Serpentine
receptor, class x protein77 protein.
Length = 313
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 9 RAISLQIGTLL*IFHSLQYNFFVAIKLSCVFCAQQYL 119
++I L I L+ I+ L+YNF IKL+ F YL
Sbjct: 106 QSIYLSINRLVAIYFPLKYNFLFGIKLTLAFHFIYYL 142
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRFI 392
FK++++G GVGK+ +V RF F+
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFV 36
>AL023844-1|CAA19526.1| 401|Caenorhabditis elegans Hypothetical
protein Y48A6B.1 protein.
Length = 401
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 260 TIIHRHNCRHNLFVSALLNRDHFYKAT 180
T++HR+ C F LLN HFY T
Sbjct: 31 TVLHRYLCLFVCFFGVLLNSLHFYVLT 57
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FK++++G SGVGK+ ++ RF
Sbjct: 9 FKLLLIGDSGVGKTCVLFRF 28
>AC024876-11|AAF60895.1| 365|Caenorhabditis elegans Hypothetical
protein Y94H6A.2 protein.
Length = 365
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 58 CNIISLLRLNSHVFFVPSNIYLN 126
C ++ ++R N+ +FF P N YLN
Sbjct: 308 CGLVLIIRRNTTIFFGPVNWYLN 330
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FK++++G SGVGK+ ++ RF
Sbjct: 9 FKLLLIGDSGVGKTCVLFRF 28
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRF 389
KV V+G VGKSALV+RF F
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIF 38
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 28.3 bits (60), Expect = 2.1
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 130 KYSNKYCWAQKTH 92
+YSN YCWAQ T+
Sbjct: 65 QYSNNYCWAQPTY 77
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRF 374
FKV+++G +GVGK+ LV +F
Sbjct: 8 FKVVLVGNAGVGKTCLVRKF 27
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 270 KSSLAKLVLYPKQKPFKVMVLGQSGVGKSALVVRFITRRF 389
K + + V P + FKV+ +G S VGK+ + RF RF
Sbjct: 189 KEEIEEEVTQP-DRIFKVVFVGDSAVGKTCFLHRFCHNRF 227
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 303 KQKPFKVMVLGQSGVGKSALVVRF 374
K+ KV++LG SGVGK++L+ ++
Sbjct: 6 KKALLKVIILGDSGVGKTSLMNQY 29
>Z77658-9|CAE17786.2| 201|Caenorhabditis elegans Hypothetical
protein F14D7.9 protein.
Length = 201
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 37 YCEYFIHCNIISLLRLNSHVFFVPSN 114
YC F+ ++I L LN +FFV N
Sbjct: 118 YCSNFLSLSVIFFLSLNRCLFFVAKN 143
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++V+G GKS +++RF F
Sbjct: 7 FKIVVVGDHNCGKSCILLRFAENSF 31
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G G GK+ V R +T F
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEF 34
>Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical
protein F14F8.12 protein.
Length = 329
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 45 IFHSLQYNFFVAIKLSCVFCAQQYLFEY-FLN 137
I H LQ F V + L VF + +Y+F + F+N
Sbjct: 85 ILHILQQTFHVILFLLAVFNSLKYIFSFHFMN 116
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G S VGK++ + R+ F
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSF 47
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G S VGK++ + R+ F
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSF 47
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G S VGK++ + R+ F
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSF 47
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G S VGK++ + R+ F
Sbjct: 37 FKLLIIGNSSVGKTSFLFRYCDDSF 61
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 LYKNDLDSTVQRQINYGDNYVY 250
LY+N+ + + Q+N GD YVY
Sbjct: 800 LYRNEHNPRRELQLNNGDEYVY 821
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 LYKNDLDSTVQRQINYGDNYVY 250
LY+N+ + + Q+N GD YVY
Sbjct: 741 LYRNEHNPRRELQLNNGDEYVY 762
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 LYKNDLDSTVQRQINYGDNYVY 250
LY+N+ + + Q+N GD YVY
Sbjct: 800 LYRNEHNPRRELQLNNGDEYVY 821
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 LYKNDLDSTVQRQINYGDNYVY 250
LY+N+ + + Q+N GD YVY
Sbjct: 784 LYRNEHNPRRELQLNNGDEYVY 805
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRFI 392
KVM+LG S GK+ L++R+ F+
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFL 28
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 318 KVMVLGQSGVGKSALVVRFITRRFI 392
KVM+LG S GK+ L++R+ F+
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFL 28
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 315 FKVMVLGQSGVGKSALVVRFITRRF 389
FK++++G S VGK++ + R+ F
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSF 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,042,897
Number of Sequences: 27780
Number of extensions: 181640
Number of successful extensions: 512
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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