Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E12
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    54   9e-10
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    48   8e-08
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   1.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.0  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 54.0 bits (124), Expect = 9e-10
 Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 4/181 (2%)
 Frame = +3

Query: 15  FKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD-YSQFDATNSVFLTKKEIKTSYPHNFK 191
           +K  L  Y + +L++ G+ ++++ V+   +  + ++ F   + V L++          F 
Sbjct: 413 YKATLPRYTENQLNYPGITVSNIEVQSQGSSKNTFNTFWQQSDVDLSRGMDFQPRGSVF- 471

Query: 192 VRQPRLNHKPFS--VTIDVXSDIATDAVIKIFLGPKYNDXGFPITLEENWHKFYELDWFT 365
           VR   L H+PF+  +T++  S+       +IFL PK ++ G P    +    F ELD FT
Sbjct: 472 VRFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMFIELDKFT 531

Query: 366 HKITPGQNKIVRNSNEFSLFKEDSLPXTDLMKLLDEGKVPLYMSEGFEC-MPNRLMLPRG 542
             +  GQN I R S++ S+         +L     +G   L       C  P  +++P+G
Sbjct: 532 VNLKQGQNTITRASSQSSVTIPFERTFRNLDLNRPQGGEELAQFNFCGCGWPQHMLIPKG 591

Query: 543 T 545
           T
Sbjct: 592 T 592


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 47.6 bits (108), Expect = 8e-08
 Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 14/192 (7%)
 Frame = +3

Query: 15  FKHYLKPYPQEKLHFVGVKINDVVVEK-------LVTFFDYSQFDATNSV-FLTKKEIKT 170
           FK  L  Y   +L++ GV + ++ V+        L TF+  S  D +  + F  +  +  
Sbjct: 413 FKATLPRYTVAQLNYPGVTVTNIEVQAKGGKPNVLSTFWQQSDLDLSRGLDFQPRGSVFV 472

Query: 171 SYPHNFKVRQPRLNHKPFSVTIDVX-SDIATDAVIKIFLGPKYNDXGFPITLEENWHKFY 347
            + H        L ++ F+  I V  S        +IFL P++++ G P         F 
Sbjct: 473 RFTH--------LQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDMFI 524

Query: 348 ELDWFTHKITPGQNKIVRNSNEFSLFKEDSLPXTDLMKLLDEGKVP--LYMSEGFEC--- 512
           ELD F   +  G N I R+S E SL    ++P     + LD  +      +SE   C   
Sbjct: 525 ELDRFAVSLKQGTNTITRHSTESSL----TIPFERTFRNLDANRPTGGDALSEFNFCGCG 580

Query: 513 MPNRLMLPRGTE 548
            P  ++LP+GTE
Sbjct: 581 WPQHMLLPKGTE 592


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 135 NSVFLTKKEIKTSYPHNFKVRQPRLNHKPFSVTIDVXSD 251
           N ++ + KE        F + QP LNH   SVT  V  D
Sbjct: 43  NEMYHSVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHD 81


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 189 KVRQPRLNHKPFSVTI 236
           K   P LNHKP ++TI
Sbjct: 255 KQELPDLNHKPLNLTI 270


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 189 KVRQPRLNHKPFSVTI 236
           K   P LNHKP ++TI
Sbjct: 147 KQELPDLNHKPLNLTI 162


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +3

Query: 135 NSVFLTKKEIKTSYPHNFKVRQPRLNHKPFSVTIDVXSD 251
           N ++   KE        F + QP LNH   SVT  V  D
Sbjct: 43  NEMYHRVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHD 81


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 12  AFKHYLKPYPQEKLHFVGVKI 74
           AF H+L  +  E LH VG+ +
Sbjct: 163 AFSHFLIVFFTETLHTVGIAL 183


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 12  AFKHYLKPYPQEKLHFVGVKI 74
           AF H+L  +  E LH VG+ +
Sbjct: 163 AFSHFLIVFFTETLHTVGIAL 183


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 12  AFKHYLKPYPQEKLHFVGVKI 74
           AF H+L  +  E LH VG+ +
Sbjct: 163 AFSHFLIVFFTETLHTVGIAL 183


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 12  AFKHYLKPYPQEKLHFVGVKI 74
           AF H+L  +  E LH VG+ +
Sbjct: 163 AFSHFLIVFFTETLHTVGIAL 183


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +3

Query: 135 NSVFLTKKEIKTSYPHNFKVRQPRLNHKPFSVTIDVXSD 251
           N ++   KE        F + QP LNH   SVT  V  D
Sbjct: 43  NEMYHRVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHD 81


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 159  LFWSRIHC*W 130
            LFW++ HC W
Sbjct: 2269 LFWNKDHCDW 2278


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 592 SNGYTKTKNWNGYPPSVPLGNI 527
           SNGY+   +   Y P  P G I
Sbjct: 132 SNGYSSPMSSGSYDPYSPNGKI 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,879
Number of Sequences: 336
Number of extensions: 2892
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)