Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E12
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical... 31 0.49
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 30 1.1
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 30 1.1
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 29 2.6
AL117204-16|CAB55130.1| 389|Caenorhabditis elegans Hypothetical... 29 3.5
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 28 4.6
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF040661-3|AAG24226.1| 187|Caenorhabditis elegans Hypothetical ... 28 6.0
AC087081-18|AAK66030.1| 124|Caenorhabditis elegans Hypothetical... 28 6.0
>AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical
protein Y56A3A.15 protein.
Length = 292
Score = 31.5 bits (68), Expect = 0.49
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +3
Query: 216 KPFSVTIDVXSDIATDAVIKIFLGPKYNDXGF---PITLEENWHKFYELDWFTHKITPGQ 386
K F V I S+I + ++++F P ++ G PI + H FY L++F K+T
Sbjct: 143 KTFGVKI-ASSEIQSSHLLELF--PSLSNLGVYNVPINTQILTHNFYWLEFFKTKVTL-D 198
Query: 387 NKIVRNSNEFSLFKEDSLPXTDL 455
+ +V N ++FS+ + ++LP +L
Sbjct: 199 DILVSNCSKFSI-EYNNLPDKEL 220
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/92 (20%), Positives = 45/92 (48%)
Frame = +3
Query: 36 YPQEKLHFVGVKINDVVVEKLVTFFDYSQFDATNSVFLTKKEIKTSYPHNFKVRQPRLNH 215
YP+ L ++ ++ DVV++K D+ N++ +E +++ + + +L
Sbjct: 388 YPKFSLAYLTLRFADVVLDKQYQLADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLK 447
Query: 216 KPFSVTIDVXSDIATDAVIKIFLGPKYNDXGF 311
+ +V S+ ++D IK++ P +N G+
Sbjct: 448 QDTKDLANVYSE-SSDLCIKVYKKPVFNPKGY 478
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/92 (20%), Positives = 45/92 (48%)
Frame = +3
Query: 36 YPQEKLHFVGVKINDVVVEKLVTFFDYSQFDATNSVFLTKKEIKTSYPHNFKVRQPRLNH 215
YP+ L ++ ++ DVV++K D+ N++ +E +++ + + +L
Sbjct: 388 YPKFSLAYLTLRFADVVLDKQYQLADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLK 447
Query: 216 KPFSVTIDVXSDIATDAVIKIFLGPKYNDXGF 311
+ +V S+ ++D IK++ P +N G+
Sbjct: 448 QDTKDLANVYSE-SSDLCIKVYKKPVFNPKGY 478
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -3
Query: 203 WLTNLEVVWVTSLNLFFGQEYTVSGIKLAIVKECD*FLNDNIIDFNADEM 54
W+TNL + NL+F +Y + G L ++ + + +++ F EM
Sbjct: 142 WITNLHYAFQDEKNLYFVMDYYIGGDMLTLLSKFVDHIPESMAKFYIAEM 191
>AL117204-16|CAB55130.1| 389|Caenorhabditis elegans Hypothetical
protein Y116A8C.25 protein.
Length = 389
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +3
Query: 324 EENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFKEDSLPXTDLMKLL 467
E +W + +E + H++ P ++++ N+ LF+ + T KLL
Sbjct: 150 ENDWTETWEEFFIRHRLKPQIDRLIETHNDRQLFELSEILYTKTAKLL 197
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +3
Query: 252 IATDAVIKIFLGPKYNDXGFPITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLF-- 425
IA + V LGP + G + L+ KF + W+T+K+T Q + V+ ++ ++
Sbjct: 452 IAENPVYGSLLGPTF---GCIMALQFQKTKFGDTYWYTNKLTEDQLEEVKKTSISAMMCR 508
Query: 426 -KEDSLPXTDLMKLLDE-GKVPLYMSEGFECMPN 521
++ S+ D+ K D +P++ + P+
Sbjct: 509 HQKTSIIQKDVFKAADNFQNIPIFCNSSVFAKPD 542
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = -2
Query: 582 IRKQRTGMDIHLQYLLATSIYLACIQNLQTYTTELFLRLI 463
+RK ++ M+ L+Y+L + C+ L+ + T +F+ +I
Sbjct: 353 LRKNKSKMNQKLEYVLGEPLETICMVILEIFNTAIFMVMI 392
>AF040661-3|AAG24226.1| 187|Caenorhabditis elegans Hypothetical
protein W10G11.1 protein.
Length = 187
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 601 LLDSNGYTKTKNWNGYPPSVP 539
LLD+ +KNWN YP +P
Sbjct: 109 LLDARASECSKNWNPYPKEIP 129
>AC087081-18|AAK66030.1| 124|Caenorhabditis elegans Hypothetical
protein Y82E9BL.1 protein.
Length = 124
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 383 PRSYLVREPIQFVEFMPVFFQCDGESXIVV 294
P+S L+R+PIQ V+ V CDGE+ + +
Sbjct: 93 PQS-LLRKPIQIVDDCSVKMYCDGEAKLFI 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,132,117
Number of Sequences: 27780
Number of extensions: 267251
Number of successful extensions: 785
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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