Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E11
         (387 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   4.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   4.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    20   7.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   7.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   9.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   9.8  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = -2

Query: 149 SISTSWLLYVSTKSTHSVRSFWDKCVHKP 63
           +I + WL + +      V   WD  + KP
Sbjct: 251 TIDSQWLAHWAFAPIRWVAKLWDSGLRKP 279


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 266 FSWYXSMVEDERVTLRGSL 210
           FSWY   V   ++ + GS+
Sbjct: 224 FSWYSKKVFYSKIIISGSI 242


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 71  HKPSRAFRMFASVRLFLSMASS 6
           H P    R F +V +FL +A+S
Sbjct: 129 HAPEEKKRSFWAVTIFLVLAAS 150


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 216 IVGLVGAQLEEDAHLLGGHV 157
           +VG V +QL ED  +   HV
Sbjct: 238 VVGKVASQLAEDFQMALKHV 257


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 321 CR*KRLLLVIVPVGPSLWFLVVLVYGRGRTGH 226
           CR  RLL++     PS  F   L+  R  T H
Sbjct: 251 CRDNRLLVLAGTSSPSNRFTRHLIQRRTHTRH 282


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = -2

Query: 155 LTSISTSWLLYVSTKSTHSVRSFWDKCVHKP 63
           LTS   SW    + K    + + W   + KP
Sbjct: 424 LTSALASWSPLTNPKQYMEIFARWKDILEKP 454


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +3

Query: 72  HALIPETAYRVRGLRRHVQ*PAGRDAGQR 158
           HA+ P  A  V     HV   A  D G+R
Sbjct: 47  HAMHPYHANHVNPTANHVMGGAVPDVGKR 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.313    0.128    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,023
Number of Sequences: 336
Number of extensions: 1642
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.6 bits)