Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E11
(387 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0517 + 3733921-3735012 33 0.060
01_01_1181 + 9410310-9411329 32 0.18
10_05_0090 - 9071438-9072346,9072497-9072535 31 0.32
07_01_0843 - 6851354-6851518,6851654-6852448 31 0.42
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 31 0.42
05_01_0575 + 5112988-5114082 30 0.56
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 29 0.97
05_04_0247 + 19358929-19359187,19360439-19360639,19361426-193615... 29 1.3
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 29 1.3
06_03_0667 - 23290585-23290962 28 2.2
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 28 3.0
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 27 3.9
07_01_0387 + 2902957-2904705 27 3.9
06_03_1068 - 27341103-27341444,27341689-27341929,27342030-273423... 27 5.2
03_05_0642 - 26346260-26346367,26347902-26348162,26348542-263498... 27 5.2
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 27 5.2
10_08_0878 - 21239104-21239968,21242008-21242927 27 6.9
01_06_1113 + 34613668-34614075,34614781-34614970,34615264-346153... 27 6.9
05_07_0194 + 28327328-28327376,28327699-28327742,28327852-283279... 26 9.1
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 26 9.1
02_02_0728 + 13416481-13416889,13416979-13417065,13417220-134173... 26 9.1
>02_01_0517 + 3733921-3735012
Length = 363
Score = 33.5 bits (73), Expect = 0.060
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 175 VCVFLKLCTNQANDPLNVTRSSSTIDXYHEKPQRRADRNNYKKKSLLPTYMLETGKGDIE 354
+ FLKLC + D + ++ ST H QR+ + Y+K S L + ++E +G+ E
Sbjct: 132 IVTFLKLCGEKITDADMIDKTLSTFHANHVNIQRQYRQAKYEKYSELVSVLMEV-QGEDE 190
Query: 355 T 357
T
Sbjct: 191 T 191
>01_01_1181 + 9410310-9411329
Length = 339
Score = 31.9 bits (69), Expect = 0.18
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 187 LKLCTNQANDPLNVTRSSSTIDXYHEKPQRRADRNNYKKKSLLPTYMLETGKGDIET 357
LKLC + D + ++ ST H QR+ ++ Y+K S L + ++E +G+ ET
Sbjct: 108 LKLCGEKITDADMIDKTLSTFHANHVNIQRQYRQDKYEKYSKLVSVLME-AQGEDET 163
>10_05_0090 - 9071438-9072346,9072497-9072535
Length = 315
Score = 31.1 bits (67), Expect = 0.32
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 187 LKLCTNQANDPLNVTRSSSTIDXYHEKPQRRADRNNYKKKSLLPTYMLETGKGDIET 357
LKLC + D + ++ ST H QR+ + Y+K S L + +LE +G+ ET
Sbjct: 87 LKLCGEKITDADMIDKTLSTFHANHVNIQRQYRQAKYEKYSELVSVLLE-AQGEDET 142
>07_01_0843 - 6851354-6851518,6851654-6852448
Length = 319
Score = 30.7 bits (66), Expect = 0.42
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 187 LKLCTNQANDPLNVTRSSSTIDXYHEKPQRRADRNNYKKKSLLPTYMLETGKGDIET 357
LKLC + D + ++ ST H QR+ + Y+K S L + ++E +G+ ET
Sbjct: 136 LKLCGEKITDADMIDKTLSTFHANHVNIQRQYHQAKYEKYSELVSVLME-AQGEDET 191
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 30.7 bits (66), Expect = 0.42
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 91 LRTECVDFVDTYSNQLVEMLVSDMSAQEVCVFLKLC 198
+ TEC + V Y ++ +L++ Q+VC + LC
Sbjct: 308 ISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLC 343
>05_01_0575 + 5112988-5114082
Length = 364
Score = 30.3 bits (65), Expect = 0.56
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 187 LKLCTNQANDPLNVTRSSSTIDXYHEKPQRRADRNNYKKKSLLPTYMLETGKGDIET 357
LKLC + D + ++ ST H QR+ + Y+K S L + ++E +G+ ET
Sbjct: 136 LKLCGEKITDADMIDKTLSTFHANHVNIQRQYRQAKYEKYSELVSMLIE-AQGEDET 191
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 29.5 bits (63), Expect = 0.97
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 100 ECVDFVDTYSNQLVEMLVSDMSAQEVCVFLKLCT 201
EC V Y Q++++L+++ ++C + LCT
Sbjct: 319 ECKTVVSQYGQQILDLLLAETQPSKICSQVGLCT 352
>05_04_0247 +
19358929-19359187,19360439-19360639,19361426-19361592,
19361819-19362089,19362550-19362818
Length = 388
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/75 (24%), Positives = 32/75 (42%)
Frame = +1
Query: 1 EQLEAMLKNNRTEANIRKALEGLCTHLSQKLRTECVDFVDTYSNQLVEMLVSDMSAQEVC 180
++L + K+NR L LCT L + + +VD Y+ + L+++ S
Sbjct: 245 DELRCVAKHNRVAKLFNLQLHALCTKLRGEFAGASITYVDIYT--IKYSLIANYSRYGFE 302
Query: 181 VFLKLCTNQANDPLN 225
++ C PLN
Sbjct: 303 NPIQACCGYGGPPLN 317
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 100 ECVDFVDTYSNQLVEMLVSDMSAQEVCVFLKLC 198
EC V Y + ++EML++ S ++C + LC
Sbjct: 310 ECKQVVRDYGDMILEMLIAQASPMKLCSQIGLC 342
>06_03_0667 - 23290585-23290962
Length = 125
Score = 28.3 bits (60), Expect = 2.2
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -2
Query: 239 DERVTLRGSLAWLVHSLRKTHTSWADMSLTS--ISTSWLLYVSTKS--THSV 96
D++ RG++AW+VH R S M L + TS L ++T S THSV
Sbjct: 16 DQQQGGRGAVAWIVHRRRLLLDSGRAMMLLGAIVLTSRQLIITTSSGATHSV 67
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 27.9 bits (59), Expect = 3.0
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = -2
Query: 218 GSLAWLVHSLRKTHTSWADMSLTSISTSWLLYVSTK------STHSVRSFWD 81
GS WL SL SWA TS ST+ L VS+ ST S WD
Sbjct: 564 GSRGWLRSSLATLSGSWAVFPTTSRSTAMELPVSSSRRTAAGSTDSWSGSWD 615
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 130 NQLVEMLVSDMSAQEVCVFLKLCT 201
N+++++L + S QE C+ LKL T
Sbjct: 747 NKVIKILTGNRSCQEQCILLKLMT 770
>07_01_0387 + 2902957-2904705
Length = 582
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 252 VYGRGRTGHVERIVGLVGAQLEEDAHLL-GGHVADQHLDQLVTV 124
+YG GR G V GA E+D H+L H ++ +LV V
Sbjct: 502 IYGEGRYGGEPCFVPRAGAAAEDDGHVLCFVHDEERGTSELVVV 545
>06_03_1068 -
27341103-27341444,27341689-27341929,27342030-27342343,
27342672-27343805
Length = 676
Score = 27.1 bits (57), Expect = 5.2
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 28 NRTEANIRKALEGLCTHLSQKLRTECVDFVDTYSNQ 135
NR + +R L GL L QKLR + +DF +SNQ
Sbjct: 116 NRVQ-RVRVQLPGLSQELLQKLREKNIDFA-AHSNQ 149
>03_05_0642 -
26346260-26346367,26347902-26348162,26348542-26349849,
26349960-26350178,26350241-26350300,26352159-26352215,
26352945-26353029,26353486-26353843,26353931-26355170
Length = 1231
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 280 ADRNNYKKKSLLPTYMLETGKGDIETNEIPDNTVN 384
AD+N +KK+ L PT + T K + ++ N+V+
Sbjct: 427 ADKNRFKKEPLFPTTVFNTCKDANKVSQGRSNSVS 461
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 100 ECVDFVDTYSNQLVEMLVSDMSAQEVCVFLKLCT 201
EC V Y Q+++ L ++ +VC + LCT
Sbjct: 329 ECKAVVSQYGQQILDQLRAETKPAKVCSSVGLCT 362
>10_08_0878 - 21239104-21239968,21242008-21242927
Length = 594
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 174 LLGGHVADQHLDQLVTVRVDE-VHALGTQFL 85
LLGG VAD +L + +T+ + E V A G L
Sbjct: 87 LLGGFVADTYLGRYLTIAIFEAVQATGVMIL 117
>01_06_1113 +
34613668-34614075,34614781-34614970,34615264-34615372,
34615822-34615912,34615948-34616076,34616306-34616804,
34617154-34617251
Length = 507
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 7 LEAMLKNNRTEANIRKALEGLCTH 78
LEA KN T NI KA LC H
Sbjct: 251 LEARKKNYPTSVNINKASATLCPH 274
>05_07_0194 +
28327328-28327376,28327699-28327742,28327852-28327961,
28328250-28328287,28328371-28328448,28328527-28328580,
28328663-28328764,28329152-28329237,28329327-28329430,
28329542-28329610,28329689-28329804,28329949-28329983,
28330152-28330294,28330473-28330598,28330700-28330784
Length = 412
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 218 GSLAWLVHSLRKTHTSWADMSL-TSISTSWLLYVSTKST 105
G +A +++ ++ S+A+ S+ T+ W LY+STK+T
Sbjct: 176 GGVAQSMYNTDESIRSFAEASMATAYEKKWPLYLSTKNT 214
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 26.2 bits (55), Expect = 9.1
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = +1
Query: 52 KALEGLCTHLSQKLRTECVDFVDTYSNQLVEMLVSDMSAQEVCVFLKLCTNQANDPLNVT 231
+A +GL S+ L T C D+V S+ + L S++ + + P +T
Sbjct: 89 RAFDGLAAPFSEFLGTACADWVMPTSSAPRQTLSSNIHRNSSRPGTPAPSGRLLCP--IT 146
Query: 232 RSSSTIDXYHEKPQRRADRNNYKKKSLL 315
S+T++ EK R+ R N + +SLL
Sbjct: 147 PHSNTLERAAEK-LVRSSRQNARARSLL 173
>02_02_0728 +
13416481-13416889,13416979-13417065,13417220-13417351,
13417474-13417539,13417754-13418919
Length = 619
Score = 26.2 bits (55), Expect = 9.1
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +3
Query: 168 PGGVRLPQAVHQPGQRSSQ-----RDPFVLDHRXVPRETTAKGRQEQLQEEVSS 314
P + + Q +H +RS+ DP V+D + TAKG E+ + +SS
Sbjct: 95 PRSLLIRQRIHADSRRSADTFPAAEDPKVVDEDEGAEDATAKGTSEEEKRLLSS 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,015,202
Number of Sequences: 37544
Number of extensions: 195217
Number of successful extensions: 503
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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