BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E11
(387 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 26 0.42
CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative calcium/c... 24 1.7
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 23 5.1
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 22 9.0
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 22 9.0
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 22 9.0
AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease pr... 22 9.0
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 26.2 bits (55), Expect = 0.42
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 150 GQRHVRPGGVRLPQAVHQPGQRSSQRDPFVLDHRXVPRETT 272
G R R GGV + HQ QRSS + P + P T
Sbjct: 294 GGRDSRGGGVDAAKKQHQQQQRSSPQPPEKMPRLNPPSSNT 334
>CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative
calcium/calmodulin-dependentprotein kinase, CAKI
protein.
Length = 872
Score = 24.2 bits (50), Expect = 1.7
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 106 VDFVDTYSNQLVEMLVSDMSAQEVC 180
V+ ++TYS++ + +V DM ++C
Sbjct: 55 VELLETYSSEGMLYMVFDMEGSDIC 79
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 1 EQLEAMLKNNRTEANIRKALEG 66
E + L+ RTE ++++ALEG
Sbjct: 139 ELMTTRLRAERTEKSLKEALEG 160
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 21.8 bits (44), Expect = 9.0
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 177 VRLPQAVHQPGQRSSQRDPFVLDHRXVPRETTAKGRQEQLQEEVSS 314
V LP+ PG+ SS R +LD E R + EE SS
Sbjct: 535 VLLPKQGKPPGESSSYRPLCMLDALGKVLERLILNRLNEHLEEPSS 580
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 21.8 bits (44), Expect = 9.0
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = -2
Query: 152 TSISTSWLLYVSTKSTHSVRSFWDKCVHKPSRAFRMFASVRLFLSMA 12
T + +LLY +K+ FW+ KP + + LS++
Sbjct: 2832 TGATGGYLLYKGSKANDGNARFWEWDWSKPETVWSTLKGISSGLSIS 2878
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 21.8 bits (44), Expect = 9.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 139 PAGYCTCRRSPRTRYAVSG 83
P GY TCR TR V G
Sbjct: 92 PIGYETCREISITRQIVVG 110
>AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease
protein.
Length = 375
Score = 21.8 bits (44), Expect = 9.0
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +3
Query: 93 AYRVRGLRRHVQ*PAGRDAGQRHVRPGGVRLPQAVH 200
A+ ++ Q P+G G H+ GG+R H
Sbjct: 283 AFNKERCKKLFQVPSGVGVGLGHICAGGIRDEDTCH 318
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.313 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,306
Number of Sequences: 2352
Number of extensions: 7123
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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