Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E11
(387 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g45470.1 68418.m05586 expressed protein contains Pfam domain,... 31 0.36
At3g11920.1 68416.m01461 glutaredoxin-related contains INTERPRO ... 30 0.47
At1g11910.1 68414.m01374 aspartyl protease family protein contai... 30 0.47
At3g20570.1 68416.m02604 plastocyanin-like domain-containing pro... 29 1.1
At5g67340.1 68418.m08492 armadillo/beta-catenin repeat family pr... 28 1.9
At3g04490.1 68416.m00476 exportin-related weak similarity to Exp... 28 1.9
At1g49260.1 68414.m05523 hypothetical protein 28 1.9
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 28 2.5
At1g65930.1 68414.m07481 isocitrate dehydrogenase, putative / NA... 28 2.5
At5g19740.1 68418.m02347 peptidase M28 family protein ileal pept... 27 3.3
At4g36980.1 68417.m05240 expressed protein 27 3.3
At1g16540.1 68414.m01981 molybdenum cofactor sulfurase (LOS5) (A... 27 3.3
At3g27190.1 68416.m03400 uracil phosphoribosyltransferase, putat... 27 4.4
At1g62290.1 68414.m07027 aspartyl protease family protein contai... 27 4.4
At1g28110.2 68414.m03444 serine carboxypeptidase S10 family prot... 27 5.8
At1g28110.1 68414.m03443 serine carboxypeptidase S10 family prot... 27 5.8
At5g17660.1 68418.m02070 expressed protein contains Pfam profile... 26 7.6
At4g15090.1 68417.m02318 far-red impaired response protein (FAR1... 26 7.6
At3g60920.1 68416.m06815 beige/BEACH domain-containing protein c... 26 7.6
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 26 7.6
At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zi... 26 7.6
>At5g45470.1 68418.m05586 expressed protein contains Pfam domain,
PF04578: Protein of unknown function, DUF594
Length = 866
Score = 30.7 bits (66), Expect = 0.36
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -1
Query: 300 LVIVPVGPSLWFLVVLVYGRGRTGHVERIVGLVGAQLEE 184
+V++ + SLW ++VLV+ G ++ER L A L++
Sbjct: 134 VVVMSLPNSLWVVIVLVFVSGTIKYLERTTALYSASLDK 172
>At3g11920.1 68416.m01461 glutaredoxin-related contains INTERPRO
Domain IPR002109, Glutaredoxin (thioltransferase)
Length = 630
Score = 30.3 bits (65), Expect = 0.47
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 159 HVRPGGVRLPQAVHQ-PGQRSSQRDPFVLDHRXVPRETTAKGRQEQLQE 302
HV P +P+AV Q P + S DP++ H +P+ +GR+ L+E
Sbjct: 45 HVHPA-TPIPEAVSQSPMKEISIDDPYLPPHPQLPKLEPPRGRRVSLEE 92
>At1g11910.1 68414.m01374 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 506
Score = 30.3 bits (65), Expect = 0.47
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 100 ECVDFVDTYSNQLVEMLVSDMSAQEVCVFLKLCT 201
+C VD Y ++++L+S+ +++C + LCT
Sbjct: 316 QCKTVVDQYGQTILDLLLSETQPKKICSQIGLCT 349
>At3g20570.1 68416.m02604 plastocyanin-like domain-containing
protein
Length = 203
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = -2
Query: 284 SALRCGFSWYXSMVEDERV-----TLRGSLAWLVHSLRKTHTSWADMSLTSISTSWLLYV 120
S + CGF ++ +R T+ G+ W V S + ++ WA+ S I S LL+V
Sbjct: 7 SMMLCGFGLLCFLMIVDRAYAREFTVGGATGWTVPSGSQVYSQWAEQSRFQIGDS-LLFV 65
Query: 119 STKSTHSV----RSFWDKC 75
+ SV R +D C
Sbjct: 66 YQSNQDSVLQVTRDAYDSC 84
>At5g67340.1 68418.m08492 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 707
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 285 VGPSLWFLVVLVYGRGRTGHVERIV-GLVGAQLEEDAHLLGGHVADQHLDQLVTV 124
VGP+ LV + G + E +V G+V ++EDA L ++LD L+++
Sbjct: 164 VGPTSEVLVKIAESTGLRSNQEILVEGVVLTNMKEDAELTDNDTEAEYLDGLISL 218
>At3g04490.1 68416.m00476 exportin-related weak similarity to
Exportin 4 (Exp4) (Swiss-Prot:Q9ESJ0) [Mus musculus] and
(Swiss-Prot:Q9C0E2) [Homo sapiens]
Length = 921
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -2
Query: 185 KTHTSWADMSLTSISTSWLL--YVSTKSTHSVRSFWDKC 75
K SW D+ L+S WL+ Y S + + +W C
Sbjct: 209 KPGASWCDVLLSSSHVGWLINFYSSVRQKFDLEGYWLDC 247
>At1g49260.1 68414.m05523 hypothetical protein
Length = 149
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 206 WLVHSLRKTHTSWADMSLTSISTSWLLYVSTKST 105
+++H L+ H +W M++ I T W + +S K+T
Sbjct: 6 YVLHGLQ--HAAWVWMTMVFIITPWFIILSNKAT 37
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila
melanogaster]; supporting cDNA
gi|20465326|gb|AY096427.1|
Length = 601
Score = 27.9 bits (59), Expect = 2.5
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +3
Query: 78 LIPETAYRVRGLRRHVQ*PAGRDAGQRHVRPGGVRLPQAVHQPGQRSSQRDPFVLDHRXV 257
L+ ++ Y RR +Q +AG H GG+ A P Q Q+DPF + +
Sbjct: 472 LLLDSLYEDDSARRQIQLT---NAGYGH---GGIDTTAAPPNPFQM--QQDPFAMSNNIA 523
Query: 258 PRETTAKGRQEQLQEEVS 311
P Q+Q Q++++
Sbjct: 524 PPTNVQMAMQQQQQQQMT 541
>At1g65930.1 68414.m07481 isocitrate dehydrogenase, putative / NADP+
isocitrate dehydrogenase, putative strong similarity to
isocitrate dehydrogenase SP|Q40345 from [Medicago
sativa]
Length = 410
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 227 TLRGSLAWLVHSLRKTHTSWADMSL-TSISTSWLLYVSTKST 105
T G +A +++ ++ ++AD S+ T+ W LY+STK+T
Sbjct: 173 TGEGGVAMAMYNTDESIRAFADASMNTAYEKKWPLYLSTKNT 214
>At5g19740.1 68418.m02347 peptidase M28 family protein ileal
peptidase I100 - Rattus norvegicus, EMBL:AF009921;
contains Pfam profiles PF04389: Peptidase family M28,
PF02225: PA domain
Length = 681
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 294 IVPVGPSLWFLVVLVYGRGRTGHVERIVGLVGAQLEEDAH-LLGGH 160
+ PVGP L + G +E ++G++ + E D + +LG H
Sbjct: 288 VYPVGPGPGVLNLSYIGETVIAKIENVIGVIEGEEEPDRYVILGNH 333
>At4g36980.1 68417.m05240 expressed protein
Length = 560
Score = 27.5 bits (58), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 211 NDPLNVTRSSSTIDXYHEKPQRRADRNNYKKKSLLPTYMLETGKGD 348
+DP +R S T + Y P+ R R+ + +S P+Y G+GD
Sbjct: 285 HDPYRESRRSPTYEAY---PRSRRSRS--RSRSYSPSYSRRNGRGD 325
>At1g16540.1 68414.m01981 molybdenum cofactor sulfurase (LOS5)
(ABA3) identical to molybdenum cofactor sulfurase
(LOS5/ABA3) [Arabidopsis thaliana] GI:15407262;
supporting cDNA gi|15407261|gb|AY034895.1|
Length = 819
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 177 VRLPQAVHQPGQRSSQRDPFVLDHRXVPRETTAKGRQEQ 293
V + +A +QPGQ ++ + HR V T+K ++E+
Sbjct: 153 VDIEEAANQPGQLTNSGPSIKVKHRAVQMRNTSKLQKEE 191
>At3g27190.1 68416.m03400 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 483
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -3
Query: 145 SRPAG-YCTCRRSPRTRYAVSGISACTN 65
S P G +C C+R P+ + S I C N
Sbjct: 435 SAPEGIHCVCKRFPKLKIVTSEIDQCLN 462
>At1g62290.1 68414.m07027 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 513
Score = 27.1 bits (57), Expect = 4.4
Identities = 8/33 (24%), Positives = 20/33 (60%)
Frame = +1
Query: 100 ECVDFVDTYSNQLVEMLVSDMSAQEVCVFLKLC 198
+C VD Y ++++L+++ +++C + LC
Sbjct: 323 QCKTVVDQYGQTILDLLLAETQPKKICSQIGLC 355
>At1g28110.2 68414.m03444 serine carboxypeptidase S10 family protein
similar to H.vulgare gene encoding serine
carboxypeptidase II, CP-MII GI:1731989
Length = 461
Score = 26.6 bits (56), Expect = 5.8
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +1
Query: 49 RKALEGLCTHLSQKLRTECVDFVDTYSNQLVEMLVSDMSAQEVCVFLKLCTNQANDPLNV 228
R ++ +C+ + ++ TE FVD Y L + S +S +V + NQ + ++V
Sbjct: 254 RGSMSSMCSKVMSQVSTETSRFVDKYDVTLDVCIPSVLSQSKV-----VSPNQVGESVDV 308
Query: 229 TRSSSTIDXYHEKPQRRA 282
T++ + + + A
Sbjct: 309 CVEDETVNYLNRRDVQEA 326
>At1g28110.1 68414.m03443 serine carboxypeptidase S10 family protein
similar to H.vulgare gene encoding serine
carboxypeptidase II, CP-MII GI:1731989
Length = 461
Score = 26.6 bits (56), Expect = 5.8
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +1
Query: 49 RKALEGLCTHLSQKLRTECVDFVDTYSNQLVEMLVSDMSAQEVCVFLKLCTNQANDPLNV 228
R ++ +C+ + ++ TE FVD Y L + S +S +V + NQ + ++V
Sbjct: 254 RGSMSSMCSKVMSQVSTETSRFVDKYDVTLDVCIPSVLSQSKV-----VSPNQVGESVDV 308
Query: 229 TRSSSTIDXYHEKPQRRA 282
T++ + + + A
Sbjct: 309 CVEDETVNYLNRRDVQEA 326
>At5g17660.1 68418.m02070 expressed protein contains Pfam profile
PF02390: Putative methyltransferase
Length = 312
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 103 CVDFVDTYSNQLVEMLVSDMS 165
CVDF D SN+LVE+ ++++
Sbjct: 62 CVDFKDLRSNELVELEYAELN 82
>At4g15090.1 68417.m02318 far-red impaired response protein (FAR1) /
far-red impaired responsive protein (FAR1) identical to
far-red impaired response protein FAR1 [Arabidopsis
thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101
domain: FAR1 family
Length = 768
Score = 26.2 bits (55), Expect = 7.6
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 212 LAWL-VHSLRKTHTSWADMSLTSISTSWLLYVSTKSTHSVRSFWDKCVHK 66
L WL H + T +D+ L +STS + + SV SF+DK +HK
Sbjct: 361 LLWLHEHRQKWVPTFMSDVFLAGMSTS-------QRSESVNSFFDKYIHK 403
>At3g60920.1 68416.m06815 beige/BEACH domain-containing protein
contains Pfam PF02138: Beige/BEACH domain; similar to
LBA isoform gamma (GI:10257405) [Mus musculus]; similar
to beige-like protein (CDC4L) - Homo sapiens; similar to
Neurobeachin: kinase A-anchoring, beige/Chediak-higashi
protein homolog implicated in neuronal membrane traffic
(AKAP550) (GI:11863541) [Drosophila melanogaster].
Length = 1928
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -2
Query: 242 EDERVTLRGSLAWLVHSLRKTHTSWADMSLTSISTSWLLYVSTKSTHSVR 93
E+E + + L HS+R+ W D+ T WL +V ST R
Sbjct: 815 EEEDLIHNFLIIMLEHSMRQKD-GWKDIEATIHCAEWLTFVGGSSTGEKR 863
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 28 NRTEANIRKALEGLCTHLSQKLRTECVDF 114
NR E +R L GL L QKLR + +DF
Sbjct: 129 NRVE-RVRVQLPGLSQELLQKLRAKNIDF 156
>At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 235 SSSTIDXYHEKPQRRADRNNYKKK 306
S S ID Y+EKP + +YK K
Sbjct: 12 SESEIDVYYEKPYEKLMNGDYKVK 35
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,004,600
Number of Sequences: 28952
Number of extensions: 154030
Number of successful extensions: 392
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 547638520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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