Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E10
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 245 8e-65
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 245 8e-65
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 245 8e-65
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 245 8e-65
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 245 8e-65
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 245 8e-65
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 190 3e-48
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 171 1e-42
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 95 2e-19
AK127085-1|BAC86820.1| 193|Homo sapiens protein ( Homo sapiens ... 29 8.9
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 245 bits (600), Expect = 8e-65
Identities = 112/166 (67%), Positives = 135/166 (81%)
Frame = -2
Query: 574 EVIGRKLPSESEPKPPLYQMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEK 395
+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV ++ EK
Sbjct: 11 KVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 394 SPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 215
SP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 214 VIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 77
I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 131 EIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 245 bits (600), Expect = 8e-65
Identities = 112/166 (67%), Positives = 135/166 (81%)
Frame = -2
Query: 574 EVIGRKLPSESEPKPPLYQMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEK 395
+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV ++ EK
Sbjct: 11 KVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 394 SPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 215
SP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 214 VIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 77
I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 131 EIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 245 bits (600), Expect = 8e-65
Identities = 112/166 (67%), Positives = 135/166 (81%)
Frame = -2
Query: 574 EVIGRKLPSESEPKPPLYQMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEK 395
+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV ++ EK
Sbjct: 11 KVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 394 SPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 215
SP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 214 VIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 77
I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 131 EIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 245 bits (600), Expect = 8e-65
Identities = 112/166 (67%), Positives = 135/166 (81%)
Frame = -2
Query: 574 EVIGRKLPSESEPKPPLYQMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEK 395
+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV ++ EK
Sbjct: 11 KVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 394 SPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 215
SP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 214 VIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 77
I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 131 EIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 245 bits (600), Expect = 8e-65
Identities = 112/166 (67%), Positives = 135/166 (81%)
Frame = -2
Query: 574 EVIGRKLPSESEPKPPLYQMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEK 395
+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV ++ EK
Sbjct: 11 KVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 394 SPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 215
SP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 214 VIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 77
I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 131 EIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 245 bits (600), Expect = 8e-65
Identities = 112/166 (67%), Positives = 135/166 (81%)
Frame = -2
Query: 574 EVIGRKLPSESEPKPPLYQMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEK 395
+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV ++ EK
Sbjct: 11 KVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 394 SPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 215
SP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 214 VIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 77
I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 131 EIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 190 bits (463), Expect = 3e-48
Identities = 85/125 (68%), Positives = 105/125 (84%)
Frame = -2
Query: 574 EVIGRKLPSESEPKPPLYQMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEK 395
+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE V ++ EK
Sbjct: 11 KVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYCGQVFEK 70
Query: 394 SPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 215
SP+++KNFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+ VE
Sbjct: 71 SPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMMVE 130
Query: 214 VIKAA 200
I A+
Sbjct: 131 EIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 171 bits (417), Expect = 1e-42
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = -2
Query: 409 EIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 230
++ EKSP+++KNFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQ
Sbjct: 30 QVFEKSPLRVKNFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 89
Query: 229 IIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 77
I+KVE I + CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 90 IMKVEEIAVSKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 94.7 bits (225), Expect = 2e-19
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = -2
Query: 274 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYK 95
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 94 RPSTYF 77
RP+T+F
Sbjct: 61 RPNTFF 66
>AK127085-1|BAC86820.1| 193|Homo sapiens protein ( Homo sapiens
cDNA FLJ45142 fis, clone BRAWH3040711. ).
Length = 193
Score = 29.5 bits (63), Expect = 8.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 3 SLEFFFFFFVMKWILLLS 56
S FFFFFF ++W L LS
Sbjct: 96 SFSFFFFFFFLRWSLALS 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,182,729
Number of Sequences: 237096
Number of extensions: 1800488
Number of successful extensions: 3836
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3835
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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