Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E09
         (582 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45)                30   1.2  
SB_12190| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.2  
SB_2332| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.2  
SB_41471| Best HMM Match : Cupin_4 (HMM E-Value=0.31)                  29   2.8  
SB_18070| Best HMM Match : V-ATPase_G (HMM E-Value=4)                  29   2.8  
SB_44985| Best HMM Match : YhjQ (HMM E-Value=0.37)                     29   2.8  
SB_6351| Best HMM Match : IncA (HMM E-Value=0.13)                      29   2.8  
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)            28   4.8  
SB_58623| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_49074| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_39984| Best HMM Match : RadC (HMM E-Value=2.2)                      28   6.4  
SB_24893| Best HMM Match : RuvB_C (HMM E-Value=3.6)                    28   6.4  
SB_19218| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_15111| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_3784| Best HMM Match : ICAM_N (HMM E-Value=4.1)                     28   6.4  
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)                     28   6.4  
SB_54353| Best HMM Match : RuvB_C (HMM E-Value=3.6)                    28   6.4  
SB_49985| Best HMM Match : RuvB_C (HMM E-Value=3.6)                    28   6.4  
SB_49381| Best HMM Match : RuvB_C (HMM E-Value=8.2)                    28   6.4  
SB_45805| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_44811| Best HMM Match : Toxin_33 (HMM E-Value=8.1)                  28   6.4  
SB_34092| Best HMM Match : RuvB_C (HMM E-Value=3.6)                    28   6.4  
SB_22691| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_16395| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_41019| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.5  
SB_23873| Best HMM Match : V-ATPase_C (HMM E-Value=6.6)                27   8.5  

>SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45)
          Length = 622

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 405 YLVPSSFCSYVPY-AVCVSASSFHTGRDERVCVLAQTSLLSLACRR 271
           +L PS  C  +P  A+C + +      DER C  A  SL +L CRR
Sbjct: 224 FLCPSGEC--IPTTALCNNENDCSDNADERNCQYANCSLNNLGCRR 267


>SB_12190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 740

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 452 TVTSLLGGRTYFRFLGTSYLLHSVLTFL 369
           T T LL   +  +F+GT YLLH VL  L
Sbjct: 385 TATGLLKQTSKLKFIGTVYLLHEVLPIL 412


>SB_2332| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1111

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 452 TVTSLLGGRTYFRFLGTSYLLHSVLTFL 369
           T T LL   +  +F+GT YLLH VL  L
Sbjct: 727 TATGLLKQTSKLKFIGTVYLLHEVLPIL 754


>SB_41471| Best HMM Match : Cupin_4 (HMM E-Value=0.31)
          Length = 406

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 27/92 (29%), Positives = 38/92 (41%)
 Frame = +2

Query: 233 ELRWWQIDRICFNLRHARLSKEV*AKTQTRSSRPV*KEEADTQTA*GT*EQNEEGTRYQE 412
           EL    +  +  +L HA  SKE    T  +  R + K E D   A     +NEE TR + 
Sbjct: 272 ELHSLGLQEVAQSLTHALSSKE----TAEQELRDILKREKDEAKARAVKRKNEEVTRLRN 327

Query: 413 I*SRCGRQEVM*RLGLXXXXXXXXXXQKREKL 508
                 RQE + +L L           KRE++
Sbjct: 328 ERLEEKRQEALRKLELERIQKEQEEKAKREQV 359


>SB_18070| Best HMM Match : V-ATPase_G (HMM E-Value=4)
          Length = 166

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 309 KHRLARHGLYEKKRPTRKQRKERKNRMKKVR 401
           +H LA H   +++RP+   R+  K R++K+R
Sbjct: 79  RHGLASHDKKKRERPSLVARERMKKRLRKIR 109


>SB_44985| Best HMM Match : YhjQ (HMM E-Value=0.37)
          Length = 1376

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 282  LDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKV 398
            LDL      KHR  RH   EKK    K RK +KN M+++
Sbjct: 1000 LDLLLAHATKHRGRRHRS-EKKEKANKARKCQKNYMRRL 1037


>SB_6351| Best HMM Match : IncA (HMM E-Value=0.13)
          Length = 417

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 309 KHRLARHGLYEKKRPTRKQRKERKNRMKKVR 401
           +H LA H   +++RP+   R+  K R++K+R
Sbjct: 378 RHGLASHDKKKRERPSLVARERMKKRLRKIR 408


>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
          Length = 694

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -3

Query: 232 VLKPNTKTTSGVTLYILASFSRISVLLTVGFPGCKTSHTICLRANNLLVI 83
           V+  NT  ++ +T     +F  I +++T     C++S TI +  NN + I
Sbjct: 137 VIINNTIISTKITTSTTTTFIIIIIIITTSSHHCRSSTTIVVTTNNTITI 186


>SB_58623| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 142

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_49074| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 141

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_39984| Best HMM Match : RadC (HMM E-Value=2.2)
          Length = 229

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_24893| Best HMM Match : RuvB_C (HMM E-Value=3.6)
          Length = 92

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_19218| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 92

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 68  EFDIKLIDTVDL 79


>SB_15111| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 150

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 429

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +1

Query: 310 NTDSLVTACMKRRGRHANSVRNVRTE*RRYEVPRNLK 420
           N  +++     R  RH  ++R ++   R Y++PRNL+
Sbjct: 370 NMTAIIQRLYSRTSRHRRNLRIIQDFVRFYKIPRNLR 406


>SB_3784| Best HMM Match : ICAM_N (HMM E-Value=4.1)
          Length = 142

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
          Length = 237

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 117 EFDIKLIDTVDL 128


>SB_54353| Best HMM Match : RuvB_C (HMM E-Value=3.6)
          Length = 141

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_49985| Best HMM Match : RuvB_C (HMM E-Value=3.6)
          Length = 127

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_49381| Best HMM Match : RuvB_C (HMM E-Value=8.2)
          Length = 119

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_45805| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -3

Query: 562 RLVPEFDIKLIDTVDL 515
           R +P  DIKLIDTVDL
Sbjct: 81  RTIPNRDIKLIDTVDL 96


>SB_44811| Best HMM Match : Toxin_33 (HMM E-Value=8.1)
          Length = 142

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_34092| Best HMM Match : RuvB_C (HMM E-Value=3.6)
          Length = 142

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_22691| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 142

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 550 EFDIKLIDTVDL 515
           EFDIKLIDTVDL
Sbjct: 22  EFDIKLIDTVDL 33


>SB_16395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 61

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 306 PKHRLARHGLYEKKRPTRKQRKERKNRMKK 395
           P+  L  H L ++ R  R+QR ER++R+K+
Sbjct: 21  PQQILFTHRLEQRYRVERRQRLERRHRVKR 50


>SB_41019| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 158

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 512 D*VDGIDKLDIEF 550
           D VDGIDKLDIEF
Sbjct: 25  DEVDGIDKLDIEF 37


>SB_23873| Best HMM Match : V-ATPase_C (HMM E-Value=6.6)
          Length = 369

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = -3

Query: 238 KFVLKPNTKTTSGVTLYILASFSRISVLLTVGFPGCKTSHTICLRANNLLVINLRVRIVA 59
           +  L P+T  + G TLY+        V L  G+      H+I  +ANN +V N+   +V 
Sbjct: 27  RVTLNPST-ASPGETLYVAVPKLSEGVTLVPGYLRVGFDHSISGQANNTVVNNVGRNLVG 85

Query: 58  VPSLIF 41
              + F
Sbjct: 86  RLKITF 91


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,964,480
Number of Sequences: 59808
Number of extensions: 311632
Number of successful extensions: 1278
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)