Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E07
         (596 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23849| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_56637| Best HMM Match : 7tm_1 (HMM E-Value=3.7e-06)                 29   2.9  
SB_47699| Best HMM Match : 7tm_1 (HMM E-Value=6.6e-23)                 29   2.9  
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)               29   3.8  
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)                   28   5.0  
SB_1254| Best HMM Match : Peptidase_U57 (HMM E-Value=0.98)             27   8.7  

>SB_23849| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 79

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = -2

Query: 403 NFNTSCYLHTGFHYRHPCAFCSVCFNGQTE 314
           N +     H    Y HPC +C  C  G  +
Sbjct: 13  NLSALTNTHQALFYPHPCCYCEACLAGNND 42


>SB_56637| Best HMM Match : 7tm_1 (HMM E-Value=3.7e-06)
          Length = 269

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -3

Query: 351 APSAVCASMAKLS--FSCKALALAMSLFSIASSISRASLGNRLNEVP 217
           AP  +  S AK++  F+C ALA A+S F +      A LG+  N VP
Sbjct: 130 APLKIIVSEAKVARVFACTALAFAISWFPVLYYTIAAVLGS-FNSVP 175


>SB_47699| Best HMM Match : 7tm_1 (HMM E-Value=6.6e-23)
          Length = 335

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -3

Query: 351 APSAVCASMAKLS--FSCKALALAMSLFSIASSISRASLGNRLNEVP 217
           AP  +  S AK++  F+C ALA A+S F +      A LG+  N VP
Sbjct: 196 APLKIIVSEAKVARVFACTALAFAISWFPVLYYTIAAVLGS-FNSVP 241


>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
          Length = 3561

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
 Frame = -3

Query: 459 WIRCFASADIGLCGSDGGPTLI--PVAISIPAFIIGTHAPSAVCASMAKLSFSCKALALA 286
           W+   AS+++ L  S G   L+  P+ ++  +  + T++   +  +     FS   L + 
Sbjct: 195 WMLDLASSNLSL--SSGAKILVSCPINLTANSLTMQTNSQFNIFGNGKVSHFSLNNLDID 252

Query: 285 MSLFSIASSISRASLGNRLNEVPILDFMPRSAAGANSVSAPRNIS 151
             L   A S+    L   + +  +LDF P    GAN+++     S
Sbjct: 253 GILRPAALSVGIGILSVNIRQHGVLDFAPYGPFGANALNVEGTFS 297


>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
          Length = 1197

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 588 PDTPSSILLPPDVHYVTLNRSPIFP 514
           PDTPSS    PD HY   +  P+ P
Sbjct: 211 PDTPSSAEKAPDAHYKVPSSRPLPP 235


>SB_1254| Best HMM Match : Peptidase_U57 (HMM E-Value=0.98)
          Length = 375

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -3

Query: 588 PDTPSSILLPPDVHYVTLNRSPIFP*SLSYSFYLVNPKL 472
           P TP  +     VH VTLN S  FP     + Y+  PKL
Sbjct: 15  PRTPLGLKAEKTVHRVTLNPSTAFP---GETLYVAVPKL 50


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,899,320
Number of Sequences: 59808
Number of extensions: 380964
Number of successful extensions: 1045
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)