Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E06
         (519 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O43924 Cluster: Retinal rod rhodopsin-sensitive cGMP 3'...    47   3e-04
UniRef50_Q1E8I4 Cluster: Putative uncharacterized protein; n=1; ...    32   6.8  
UniRef50_Q1ZRA1 Cluster: Probable integral membrane protein; n=2...    32   9.0  
UniRef50_P26093 Cluster: Lipoprotein E precursor; n=21; Proteoba...    32   9.0  

>UniRef50_O43924 Cluster: Retinal rod rhodopsin-sensitive cGMP
           3',5'-cyclic phosphodiesterase subunit delta; n=31;
           Eumetazoa|Rep: Retinal rod rhodopsin-sensitive cGMP
           3',5'-cyclic phosphodiesterase subunit delta - Homo
           sapiens (Human)
          Length = 150

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +2

Query: 449 LFQKVLFKGRCLEEWFFEFGYVI 517
           L QKV FKG+CLEEWFFEFG+VI
Sbjct: 76  LEQKVYFKGQCLEEWFFEFGFVI 98


>UniRef50_Q1E8I4 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 421

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 88  SKQLSIPFSLIYITTFPTTSQCSHYPYFV 2
           +K + IPFSL+Y+T+   TS C  Y  F+
Sbjct: 103 TKMVLIPFSLLYVTSVMLTSLCKEYYQFL 131


>UniRef50_Q1ZRA1 Cluster: Probable integral membrane protein; n=2;
           Vibrionaceae|Rep: Probable integral membrane protein -
           Vibrio angustum S14
          Length = 407

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
 Frame = +2

Query: 329 LCLPLWEGGV-------MQ*TEVLIV*RSFFYQMYRNTNVR*WF*SHLFQKVLFKGRCLE 487
           L   LW GG+          ++VL +     YQ Y       W    LF  +LF G C++
Sbjct: 291 LAAALWHGGISFGGVIGFILSDVLTIPMMRVYQKYYGKRPTKWMVGLLFMAILFTGLCVD 350

Query: 488 EWFFEFGYV 514
             F  FG+V
Sbjct: 351 AIFNGFGWV 359


>UniRef50_P26093 Cluster: Lipoprotein E precursor; n=21;
           Proteobacteria|Rep: Lipoprotein E precursor -
           Haemophilus influenzae
          Length = 274

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 70  ECLVASSMWRGWMTEDPNP*DGSDWSLW 153
           E ++ +S + GW  ++  P DG DW+ W
Sbjct: 87  ETMLDNSPYAGWQVQNNKPFDGKDWTRW 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,223,871
Number of Sequences: 1657284
Number of extensions: 9235483
Number of successful extensions: 18781
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18777
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)