Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E06
         (519 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456980-1|CAG33261.1|  150|Homo sapiens PDE6D protein.                47   5e-05
BT007278-1|AAP35942.1|  150|Homo sapiens phosphodiesterase 6D, c...    47   5e-05
BC007831-1|AAH07831.1|  150|Homo sapiens phosphodiesterase 6D, c...    47   5e-05
AJ001626-1|CAA04880.1|  150|Homo sapiens p17 protein protein.          47   5e-05
AF045999-1|AAC39720.1|  150|Homo sapiens rod cGMP phosphodiester...    47   5e-05
AF042835-1|AAC25953.1|  150|Homo sapiens phosphodiesterase delta...    47   5e-05
AF022912-1|AAB87872.1|  150|Homo sapiens cGMP phosphodiesterase ...    47   5e-05
AC073476-3|AAY24151.1|  150|Homo sapiens unknown protein.              47   5e-05

>CR456980-1|CAG33261.1|  150|Homo sapiens PDE6D protein.
          Length = 150

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +2

Query: 449 LFQKVLFKGRCLEEWFFEFGYVI 517
           L QKV FKG+CLEEWFFEFG+VI
Sbjct: 76  LEQKVYFKGQCLEEWFFEFGFVI 98


>BT007278-1|AAP35942.1|  150|Homo sapiens phosphodiesterase 6D,
           cGMP-specific, rod, delta protein.
          Length = 150

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +2

Query: 449 LFQKVLFKGRCLEEWFFEFGYVI 517
           L QKV FKG+CLEEWFFEFG+VI
Sbjct: 76  LEQKVYFKGQCLEEWFFEFGFVI 98


>BC007831-1|AAH07831.1|  150|Homo sapiens phosphodiesterase 6D,
           cGMP-specific, rod, delta protein.
          Length = 150

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +2

Query: 449 LFQKVLFKGRCLEEWFFEFGYVI 517
           L QKV FKG+CLEEWFFEFG+VI
Sbjct: 76  LEQKVYFKGQCLEEWFFEFGFVI 98


>AJ001626-1|CAA04880.1|  150|Homo sapiens p17 protein protein.
          Length = 150

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +2

Query: 449 LFQKVLFKGRCLEEWFFEFGYVI 517
           L QKV FKG+CLEEWFFEFG+VI
Sbjct: 76  LEQKVYFKGQCLEEWFFEFGFVI 98


>AF045999-1|AAC39720.1|  150|Homo sapiens rod cGMP phosphodiesterase
           delta subunit protein.
          Length = 150

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +2

Query: 449 LFQKVLFKGRCLEEWFFEFGYVI 517
           L QKV FKG+CLEEWFFEFG+VI
Sbjct: 76  LEQKVYFKGQCLEEWFFEFGFVI 98


>AF042835-1|AAC25953.1|  150|Homo sapiens phosphodiesterase delta
           subunit protein.
          Length = 150

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +2

Query: 449 LFQKVLFKGRCLEEWFFEFGYVI 517
           L QKV FKG+CLEEWFFEFG+VI
Sbjct: 76  LEQKVYFKGQCLEEWFFEFGFVI 98


>AF022912-1|AAB87872.1|  150|Homo sapiens cGMP phosphodiesterase
           delta subunit protein.
          Length = 150

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +2

Query: 449 LFQKVLFKGRCLEEWFFEFGYVI 517
           L QKV FKG+CLEEWFFEFG+VI
Sbjct: 76  LEQKVYFKGQCLEEWFFEFGFVI 98


>AC073476-3|AAY24151.1|  150|Homo sapiens unknown protein.
          Length = 150

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +2

Query: 449 LFQKVLFKGRCLEEWFFEFGYVI 517
           L QKV FKG+CLEEWFFEFG+VI
Sbjct: 76  LEQKVYFKGQCLEEWFFEFGFVI 98


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,684,302
Number of Sequences: 237096
Number of extensions: 1530168
Number of successful extensions: 2622
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2622
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)