Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E06
         (519 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   3.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   4.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.6  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 163 N*VNKFWTRLKIS*RKAN*KGLITINNIT 249
           N +NK+W  +KIS    + + L+  N +T
Sbjct: 361 NEMNKWWWNMKISNLSFDKQSLLKENTVT 389


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 64  RKECLVASSMWRGWMTEDPNP*DGSDWS 147
           +++ + A+  W GW+    NP   + WS
Sbjct: 367 QEKIVFAAVTWLGWINSGMNPVIYACWS 394



 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -3

Query: 223 LFSW-PFFRISSIWSKICSPSLTLTKV 146
           +  W PFF + ++WS  CS  +   K+
Sbjct: 345 IICWLPFF-VVNLWSGFCSQCIWQEKI 370


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 67  KECLVASSMWRGWMTED 117
           K C  A+  W+G+MT +
Sbjct: 299 KPCTWAARPWQGYMTNN 315


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 67  KECLVASSMWRGWMTED 117
           K C  A+  W+G+MT +
Sbjct: 299 KPCTWAARPWQGYMTNN 315


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 67  KECLVASSMWRGWMTED 117
           K C  A+  W+G+MT +
Sbjct: 299 KPCTWAARPWQGYMTNN 315


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 61  ERKECLVASSMWRGWMTEDPNP 126
           E + CL ASS  RG     P P
Sbjct: 641 ENQNCLDASSSRRGSKIGSPTP 662


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,237
Number of Sequences: 438
Number of extensions: 2930
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)