Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E05
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical pr... 31 0.70
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 29 3.8
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81030-17|CAB02706.2| 72|Caenorhabditis elegans Hypothetical p... 28 6.6
U53338-4|AAA96192.3| 235|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF317421-1|AAK69599.1| 235|Caenorhabditis elegans lysosomal-ass... 28 6.6
AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical ... 28 6.6
AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical ... 28 6.6
Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF047658-1|AAC04418.2| 348|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical
protein R13H4.2a protein.
Length = 225
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 396 LTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRY 542
L +D ++ YYY+ + ++ S RY + Y+N Y TRY
Sbjct: 71 LYDDYWYDKYYYFSPLYRSTYYPSRRYSYSDYLPNPYYWNNYGSYWTRY 119
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 33 RLLLFSTCSTMLKTLKPSTRVPLSLV 110
R+ F TCS +KT+K +PLS+V
Sbjct: 290 RIEQFLTCSETIKTVKSDALIPLSIV 315
>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
protein C27B7.7 protein.
Length = 1471
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +3
Query: 72 TLKPSTRVPLSLVCT*MRDSSCTHIILQLSSAMILMDSFYQLLMKFIHNSSLIWTL 239
T P T PLS+ CT ++ S ++ +++ + +DS + ++ +H + T+
Sbjct: 256 TADPQTNEPLSITCT-VKSVSKASVLWKVNGIKVSVDSSFYTVVTSVHEDFIESTI 310
>Z81030-17|CAB02706.2| 72|Caenorhabditis elegans Hypothetical
protein C01G10.4 protein.
Length = 72
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 276 FFTMQRLLIMDIVKEEEQYVYYANYSNTFLYNNEEQRLTYLTEDIGFNSYYYY 434
FF+ L++ + Y YY Y N YNN TY N+ YYY
Sbjct: 3 FFSFIASLLVLLSTANAYYTYYY-YPNNNNYNNNNGYTTYYYYPNNNNNGYYY 54
>U53338-4|AAA96192.3| 235|Caenorhabditis elegans Hypothetical
protein C05E11.3 protein.
Length = 235
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 368 VKESVGIVGVIHILLFLFYNVHN 300
VK I+G +H+L+ LF+ +H+
Sbjct: 47 VKTGAFIIGCVHVLMILFFLIHS 69
>AF317421-1|AAK69599.1| 235|Caenorhabditis elegans
lysosomal-associated transmembraneprotein protein.
Length = 235
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 368 VKESVGIVGVIHILLFLFYNVHN 300
VK I+G +H+L+ LF+ +H+
Sbjct: 47 VKTGAFIIGCVHVLMILFFLIHS 69
>AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical
protein F37B4.7 protein.
Length = 424
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 8 IFYQKLREEAIALFHLFYYAKDFETFYKSA-AFARVHLNEGQFLYAYYIA 154
+FY IA F + Y K +T YKSA AF R L G+FL AY +A
Sbjct: 101 VFYGWATATEIAYF-AYIYVKVPKTEYKSATAFTRAALLVGRFL-AYALA 148
>AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical
protein C53D5.5 protein.
Length = 642
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 239 LLKIYRTKMQDGILHDAKAINYGHCKRGRAVC 334
++++ K I+HD+K + Y K GR VC
Sbjct: 317 IIRLQDFKNYKSIVHDSKNVIYTKLKNGRGVC 348
>Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical
protein F53C11.8 protein.
Length = 388
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 179 GFVLPAPYEVYPQFFVNMDTLLKIYRTKMQDGILH-DAKAINYGHCKRGRAV 331
GF+ P P VYP L+++R + DG +H DA IN + + G A+
Sbjct: 120 GFI-PDPDNVYPDLIATTSDCLRLWR--VVDGKVHPDAVMINNTNSQYGSAL 168
>AF047658-1|AAC04418.2| 348|Caenorhabditis elegans Hypothetical
protein K03H6.2 protein.
Length = 348
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 444 HLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYY 545
HLPF + + + H R EI+YN + + Y+
Sbjct: 264 HLPFQYELVDHDKMYHHRTEIWYNNDMSIGSSYH 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,442,339
Number of Sequences: 27780
Number of extensions: 297438
Number of successful extensions: 710
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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