Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E03
(620 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.06 |||ThiJ domain protein|Schizosaccharomyces pombe|chr ... 30 0.31
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 29 0.72
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 28 1.3
SPBC16A3.06 |||tRNA specific adenosine deaminase |Schizosaccharo... 27 2.9
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 26 3.8
SPAC6B12.06c |||conserved fungal protein|Schizosaccharomyces pom... 26 3.8
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 26 3.8
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 5.1
SPBC14C8.05c |meu17||glucan-alpha-1,4-glucosidase|Schizosaccharo... 25 6.7
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb... 25 8.8
>SPAC1F7.06 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 251
Score = 29.9 bits (64), Expect = 0.31
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 83 LMTSYYFPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQKGKFESYG-KKIDFHDEK 259
L+ SYY PF DN ++ V YEA + +FE+ + YG F D
Sbjct: 20 LLNSYYGPFYDDGDNTGVNVVDLYEAFK---VFEENGFDIVIASDTGDYGFDDKSFRDPA 76
Query: 260 AINFVGNYWQRTPICMKKKLQRI 328
++ + + + KKL+ I
Sbjct: 77 IVDETQSIFSNPDCSLMKKLKNI 99
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 28.7 bits (61), Expect = 0.72
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 476 GGSLYGHPRLYPEALSFKRNFHFVGVPINDVVVEKLVTFL 595
G L+G+ RL E KR H V VP+ + ++ ++V L
Sbjct: 100 GCVLFGNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDAL 139
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 164 RFLDIFEKTFVQSLQKGKFESYG-KKID-FHDEKA 262
+FL+I+ +T + L G E G KK++ +HD KA
Sbjct: 606 QFLEIYNETIIDLLASGNEEEKGKKKLEIYHDTKA 640
>SPBC16A3.06 |||tRNA specific adenosine deaminase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 26.6 bits (56), Expect = 2.9
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = -3
Query: 444 FSKSGLVKVKRTGHEGVLVEWFRCCTEHMASDNFIRSLIILCNFFFIQIGVLCQ*FPTKL 265
F G+V+ K G V W + CT+ +A+ ++ L + I + C K+
Sbjct: 178 FGLLGIVRTK-PGRPDAPVSWSKSCTDKLAAKQYLSILNSQTSLICEPIYLSCVVLYKKV 236
Query: 264 IAFSSWKSIFLPYDSNLP 211
I S+ F P+ P
Sbjct: 237 IVKSAIDRAFGPFGRCAP 254
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 3.8
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 383 HSTSTPSCPVRLTFTKPDFENLHSIRYITRNGGSLYGHPRLYPEALSFKRNFH 541
HST TP R T+ N HS +Y ++ S Y + + +A S + ++H
Sbjct: 133 HSTVTPQTSERRRETRRHQNNQHSQQYSSQERSSSYNN---FEDASSPQSSYH 182
>SPAC6B12.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 117
Score = 26.2 bits (55), Expect = 3.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 257 KAINFVGNYWQRTPICMKKKLQRIINDLMKLSL-AMCSVQHLNHSTSTPSC 406
KA N W++ I +K+K+ N KL L +M ++ L S+ SC
Sbjct: 19 KASNKASIEWKKQNIAVKRKIGGYWNPKKKLPLESMDEIRRLKKEKSSMSC 69
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 26.2 bits (55), Expect = 3.8
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 377 LNHSTSTPSCPVRLTFTKPDFENLHSIRYITRNGGSLYGHPRLYPEALSFKRNFHFVGVP 556
LN S S P+++ P +N+ + + NG + H + +FK +F F+ +P
Sbjct: 594 LNISISEVHSPIKIIVNTPT-QNMQ-LPWQAVNGNNRLDHDFAFHVDDNFKVSFMFLDIP 651
Query: 557 IND 565
I D
Sbjct: 652 IED 654
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 29 GSIPEFSWYSPIKTGYYPLMTSYYFPFAQRP 121
G P+ +Y P + YYP +Y P +P
Sbjct: 107 GGYPQQPYYYPNQPNYYPAQPAYAQPVYAQP 137
>SPBC14C8.05c
|meu17||glucan-alpha-1,4-glucosidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 450
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = +1
Query: 418 DFYQTGLREPAFY---QVYYPEWGFPLRASKAL 507
DFY GL EP F Y +WG P S AL
Sbjct: 125 DFYAGGLGEPKFNVDGTSYDGDWGRPQNDSPAL 157
>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 424
Score = 25.0 bits (52), Expect = 8.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 182 EKTFVQSLQKGKFESYGKKIDFHDEKAIN 268
EKT V+S+ K + + G DFH E A N
Sbjct: 12 EKTHVESIVKFEDSNRGTITDFHIETANN 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,664,618
Number of Sequences: 5004
Number of extensions: 58744
Number of successful extensions: 207
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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