Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E03
         (620 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_122| Best HMM Match : No HMM Matches (HMM E-Value=.)                30   1.7  
SB_34310| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.3  
SB_25926| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_44205| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73)                28   5.3  
SB_643| Best HMM Match : No HMM Matches (HMM E-Value=.)                28   5.3  
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)         28   7.0  

>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6489

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = +2

Query: 68   TGYYPLMT-SYYFPF--AQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQKGKFESYGKK 238
            T Y P  T S Y      Q+P+N++LH     +A+        T    L  GKF+S G+ 
Sbjct: 4715 TSYQPAATDSLYISSQSTQKPNNHHLHRTCKADALEV----NVTLRGGLHAGKFKSVGRT 4770

Query: 239  IDFHD 253
             D H+
Sbjct: 4771 RDVHE 4775


>SB_122| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 124

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 390 QAHLHAQCA*LLPNR-TSRTCILSGILPGMGVPFTGIQGFTLKPYPSRETFIS 545
           +AHLH     L  NR T     +SG  PG    F  I   +++P  S+  FIS
Sbjct: 61  KAHLHINLIVLNSNRLTDCHSFISGTSPGSMTKFMAIATRSMRPETSQNLFIS 113


>SB_34310| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1103

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = -1

Query: 260 PFHRGNQFSCHTIRICLSVGTVRKSFQKCPRTVLL-RSSLRCVDC 129
           P H  NQ  C    IC+  G   KS  KCP    L  S  RC  C
Sbjct: 245 PCHEANQGGCEGRAICVYTGP-GKSICKCPPGYKLDESQARCTLC 288


>SB_25926| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 221

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 435 TSRTCILSGILPGMGVPFTGIQGFTLKPYPSRETFISSA 551
           T   C L   +PG+GVP+  + G  L P  + + F  +A
Sbjct: 54  TPHKCYLPRYVPGIGVPWFQLTGMLLSPKSNFDVFHDTA 92


>SB_44205| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 611

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 20/62 (32%), Positives = 26/62 (41%)
 Frame = +3

Query: 186 RLSYSPYRKANSNRMARKLISTMKRQLTLSETIGRERRSV*RRSYKGLSTIL*NCRSPCA 365
           R + S   +AN+        ST  R  T S T    R +    SY G +T    CR+P  
Sbjct: 213 RSNTSANTRANTCSNTSTYTSTNTRANTSSNTCADTRSNTSTSSYTGTNTSASYCRTPEP 272

Query: 366 RC 371
           RC
Sbjct: 273 RC 274


>SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73)
          Length = 617

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 428 KPDFE-NLHSIRYITRNGGSLYGHPRLYPEALSFKRNFHFVGVPINDVVVE 577
           KP ++  L   R + R GG L    +LY E LS     H   + + D +V+
Sbjct: 462 KPSYQARLGLARVLVRKGGELTEAEKLYEEVLSMAPEVHDAYIELADSLVK 512


>SB_643| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 574

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 377 LNHSTSTPSCPVRLTFTKPDFENLHSIRYITRNGGSL 487
           L H+         L + KPDFE L+  R +  NG  L
Sbjct: 471 LGHAIKHMEIQQELEYQKPDFEKLYPYRQLEANGHDL 507


>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
          Length = 2269

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = +2

Query: 203  LQKGKFE-----SYGKKIDFHDEKAINFVGNYWQRTPICMKKKLQRIINDLMKLSLAMC 364
            L+KGKF+     S  K ID   E+   F+G+ W +    +  K ++I     KL+   C
Sbjct: 1093 LEKGKFQVKQWCSNSKTIDKSCERYCTFLGHKWDKDRDLLTFKKEKIKETQTKLTKRKC 1151


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,659,536
Number of Sequences: 59808
Number of extensions: 422858
Number of successful extensions: 1287
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)