Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_E01
(372 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120; Fung... 66 2e-10
UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24; Vir... 51 6e-06
UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-05
UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6; Dikarya... 50 1e-05
UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=... 49 2e-05
UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1; O... 48 7e-05
UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2; Eukaryota|... 46 2e-04
UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia A... 41 0.008
UniRef50_Q6BGJ5 Cluster: 60S ribosomal L18A, putative; n=5; Olig... 38 0.058
UniRef50_A2E7V4 Cluster: Ribosomal protein L18ae, putative; n=4;... 37 0.10
UniRef50_UPI00004983AA Cluster: 60S ribosomal protein L18a; n=1;... 35 0.54
UniRef50_Q8SRD7 Cluster: RIBOSOMAL PROTEIN L18A; n=1; Encephalit... 34 0.95
UniRef50_UPI0000D9EE80 Cluster: PREDICTED: similar to ribosomal ... 33 1.3
UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2; Crypto... 33 1.3
UniRef50_UPI00015A74B5 Cluster: UPI00015A74B5 related cluster; n... 32 3.8
UniRef50_Q6FX26 Cluster: Similarity; n=1; Candida glabrata|Rep: ... 32 3.8
UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1; Guilla... 31 6.7
UniRef50_A0GXL6 Cluster: Putative uncharacterized protein; n=3; ... 31 8.8
UniRef50_Q12955 Cluster: Ankyrin-3; n=78; root|Rep: Ankyrin-3 - ... 31 8.8
>UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120;
Fungi/Metazoa group|Rep: 60S ribosomal protein L18a -
Homo sapiens (Human)
Length = 176
Score = 66.1 bits (154), Expect = 2e-10
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = +3
Query: 222 NFGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRDMGXXXXXXXXSIR 368
NFGIWLRY+SRSG HNMYREYR+L QCYRDMG SI+
Sbjct: 77 NFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 125
Score = 33.5 bits (73), Expect = 1.3
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 68 LYTK*GFLSDPIVAKSRFWYFLRQLXERQK 157
LY F + +VAKSRFWYF+ QL + +K
Sbjct: 27 LYRMRIFAPNHVVAKSRFWYFVSQLKKMKK 56
>UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24;
Viridiplantae|Rep: 60S ribosomal protein L18a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 178
Score = 51.2 bits (117), Expect = 6e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 222 NFGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRDM 332
NFGIWLRY+SR+G HNMY+EYR+ Q Y +M
Sbjct: 76 NFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEM 112
>UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 532
Score = 50.4 bits (115), Expect = 1e-05
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +3
Query: 222 NFGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRDM 332
NF +WLRY SRSG HNMY+E+R L + Y+DM
Sbjct: 434 NFAVWLRYNSRSGTHNMYKEFRALSRAEAAESLYQDM 470
Score = 32.3 bits (70), Expect = 2.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 68 LYTK*GFLSDPIVAKSRFWYFLRQLXERQK 157
LY F + VA+SRFWYF+RQL + +K
Sbjct: 332 LYRMRIFAVNKSVAESRFWYFVRQLRKMKK 361
>UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6;
Dikarya|Rep: 60S ribosomal protein L20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 176
Score = 50.4 bits (115), Expect = 1e-05
Identities = 29/73 (39%), Positives = 38/73 (52%)
Frame = +3
Query: 150 VKKTTGVKLVSSRGNSRKESC*D*NFGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRD 329
VKK TG ++V+ S + FGIW+RY+SRSG HNMY+E+R+ Y D
Sbjct: 50 VKKATG-EIVAINEISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYAD 108
Query: 330 MGXXXXXXXXSIR 368
M SIR
Sbjct: 109 MAARHRARFRSIR 121
>UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=9;
Aconoidasida|Rep: 60S ribosomal protein L18, putative -
Theileria parva
Length = 191
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +3
Query: 153 KKTTGVKLVSSRGNSRKESC*D*NFGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRDM 332
K++ G L +R N K+ NFG+ LRY+SR+G HNMY+EYR+L Q Y DM
Sbjct: 68 KRSGGEILACNRLNEPKKGQVK-NFGVLLRYKSRTGTHNMYKEYRDLTRTGAVSQMYGDM 126
Score = 31.5 bits (68), Expect = 5.0
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +2
Query: 86 FLSDPIVAKSRFWYFLRQLXERQK 157
F + ++AKSRFWYF+++L + ++
Sbjct: 46 FAKNSVLAKSRFWYFMKRLNKAKR 69
>UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein L18a
- Ostreococcus tauri
Length = 254
Score = 47.6 bits (108), Expect = 7e-05
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +3
Query: 222 NFGIWLRYESRSGVHNMYREYRE 290
NFGIW+RY+SR+G HN Y+EYRE
Sbjct: 151 NFGIWIRYQSRTGFHNSYKEYRE 173
>UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2;
Eukaryota|Rep: Ribosomal protein L18a - Dictyostelium
discoideum AX4
Length = 191
Score = 46.0 bits (104), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3
Query: 222 NFGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRDM 332
NFG+++RY SRSG HN+Y+EYR+L Q Y +M
Sbjct: 93 NFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEM 129
>UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia ATCC
50803|Rep: GLP_7_3170_2649 - Giardia lamblia ATCC 50803
Length = 173
Score = 40.7 bits (91), Expect = 0.008
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +3
Query: 222 NFGIWLRYESRSGVHNMYREYRE 290
NFG+ LRY SR G HNMYRE RE
Sbjct: 71 NFGVLLRYRSRVGQHNMYREVRE 93
>UniRef50_Q6BGJ5 Cluster: 60S ribosomal L18A, putative; n=5;
Oligohymenophorea|Rep: 60S ribosomal L18A, putative -
Paramecium tetraurelia
Length = 192
Score = 37.9 bits (84), Expect = 0.058
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +3
Query: 225 FGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRDM 332
+GI L+Y+SR+ +HNMY+E+R+ Q Y++M
Sbjct: 89 YGIVLKYQSRTTIHNMYKEFRDTTLNGAVSQLYQEM 124
>UniRef50_A2E7V4 Cluster: Ribosomal protein L18ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L18ae,
putative - Trichomonas vaginalis G3
Length = 213
Score = 37.1 bits (82), Expect = 0.10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 222 NFGIWLRYESRSGVHNMYREYRE 290
N+GIWL Y S HN+Y+EYR+
Sbjct: 73 NYGIWLSYRSTRNHHNVYKEYRD 95
>UniRef50_UPI00004983AA Cluster: 60S ribosomal protein L18a; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18a - Entamoeba histolytica HM-1:IMSS
Length = 173
Score = 34.7 bits (76), Expect = 0.54
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 222 NFGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRDM 332
N+ I+LRY S G+HN+ ++YR++ Q Y D+
Sbjct: 70 NYQIFLRYVSAGGIHNITKQYRDVTRVGAVRQMYNDL 106
>UniRef50_Q8SRD7 Cluster: RIBOSOMAL PROTEIN L18A; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN L18A -
Encephalitozoon cuniculi
Length = 173
Score = 33.9 bits (74), Expect = 0.95
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 222 NFGIWLRYESRSGVHNMYREYREL 293
N+GI Y SRSGVHN Y+E R +
Sbjct: 76 NYGIRFVYRSRSGVHNAYKECRAI 99
>UniRef50_UPI0000D9EE80 Cluster: PREDICTED: similar to ribosomal
protein L18a, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L18a, partial -
Macaca mulatta
Length = 124
Score = 33.5 bits (73), Expect = 1.3
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 68 LYTK*GFLSDPIVAKSRFWYFLRQLXERQK 157
LY F + +VAKSRFWYF+ QL + +K
Sbjct: 85 LYRMRIFAPNHVVAKSRFWYFVSQLKKMKK 114
>UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L18a -
Cryptosporidium hominis
Length = 185
Score = 33.5 bits (73), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 222 NFGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRDMGXXXXXXXXSIR 368
NF I L+Y SR+ V MY+EYR++ Q Y ++ SI+
Sbjct: 83 NFAILLQYRSRTNVVYMYKEYRDISKTGAVSQMYEELAGSHRAQRSSIQ 131
>UniRef50_UPI00015A74B5 Cluster: UPI00015A74B5 related cluster; n=1;
Danio rerio|Rep: UPI00015A74B5 UniRef100 entry - Danio
rerio
Length = 573
Score = 31.9 bits (69), Expect = 3.8
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 279 HGTYCGHQSETRNATRYQSSNLNRTLFWN 193
H T C H + TR SSN N +FWN
Sbjct: 532 HSTSCTHTALWXKGTRVDSSNYNPQVFWN 560
>UniRef50_Q6FX26 Cluster: Similarity; n=1; Candida glabrata|Rep:
Similarity - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 121
Score = 31.9 bits (69), Expect = 3.8
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -1
Query: 327 LYSTDDCTPTTQVHGIHGT---YCGHQSETRNATRYQSSNL 214
LY+ D CTP H HGT H + N +Y SS L
Sbjct: 80 LYNHDRCTPRHNRHNRHGTTAFIANHNCRSHNLPQYHSSTL 120
>UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L18A -
Guillardia theta (Cryptomonas phi)
Length = 159
Score = 31.1 bits (67), Expect = 6.7
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +3
Query: 150 VKKTTGVKLVSSRGNSRKESC*D*NFGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRD 329
+KK G +++ + +K + +GIW + + ++G N+++EYR+ Q Y +
Sbjct: 48 LKKKNGSIIIAQKIYEKKNNFVK-TYGIWSKVKIKNGYVNLFKEYRDFMMTGAVEQFYIE 106
Query: 330 MG 335
+G
Sbjct: 107 LG 108
>UniRef50_A0GXL6 Cluster: Putative uncharacterized protein; n=3;
Chloroflexus|Rep: Putative uncharacterized protein -
Chloroflexus aggregans DSM 9485
Length = 389
Score = 30.7 bits (66), Expect = 8.8
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -1
Query: 336 LPYLYSTDDCTPTTQVHGIHGTYCGHQSETRNATRYQSSNLNRTLFWNFPLRIPI 172
LPYL T+D P+ + R RYQ R L+W PLR+ I
Sbjct: 78 LPYLIVTEDVPPSLSAVTRKRWVLSLRPGQRYTLRYQVQGRQRGLYWLGPLRLVI 132
>UniRef50_Q12955 Cluster: Ankyrin-3; n=78; root|Rep: Ankyrin-3 - Homo
sapiens (Human)
Length = 4377
Score = 30.7 bits (66), Expect = 8.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 190 EIPEKSPVKIRTLVSGCVTSLALVSTICTVNTVNLSGRCAV 312
++P K PVK+R S CVT+ +T T T + C V
Sbjct: 3945 QLPSKLPVKVR---STCVTTTTTTATTTTTTTTTTTTSCTV 3982
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,181,807
Number of Sequences: 1657284
Number of extensions: 6020023
Number of successful extensions: 15377
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 15071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15374
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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