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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_E01
         (372 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19131| Best HMM Match : No HMM Matches (HMM E-Value=.)              63   8e-11
SB_3589| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   0.69 
SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.2  
SB_40645| Best HMM Match : zf-C2H2 (HMM E-Value=3.30006e-42)           28   2.8  
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)            28   2.8  
SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15)           27   3.7  
SB_1872| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   3.7  
SB_39164| Best HMM Match : RNB (HMM E-Value=0)                         27   4.9  
SB_59517| Best HMM Match : Cu-oxidase_2 (HMM E-Value=1e-06)            26   8.5  
SB_35530| Best HMM Match : Pinin_SDK_memA (HMM E-Value=2.4)            26   8.5  
SB_53046| Best HMM Match : Cu-oxidase_3 (HMM E-Value=2.8e-31)          26   8.5  
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   8.5  
SB_14386| Best HMM Match : Ion_trans_2 (HMM E-Value=2.4e-11)           26   8.5  

>SB_19131| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 456

 Score = 62.9 bits (146), Expect = 8e-11
 Identities = 34/73 (46%), Positives = 43/73 (58%)
 Frame = +3

Query: 150 VKKTTGVKLVSSRGNSRKESC*D*NFGIWLRYESRSGVHNMYREYRELEW*VCSHQCYRD 329
           +KK+ G ++VS +    K+     NFGIWLRY+SRSG HNMYREYR+L        CYRD
Sbjct: 254 MKKSQG-EIVSCQQIYEKKPLQIKNFGIWLRYDSRSGTHNMYREYRDLTVSGAVTACYRD 312

Query: 330 MGXXXXXXXXSIR 368
           M         SI+
Sbjct: 313 MAARHRARGYSIQ 325



 Score = 34.7 bits (76), Expect = 0.024
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +2

Query: 68  LYTK*GFLSDPIVAKSRFWYFLRQLXERQKDYWXEIGILKGKFQKRVL 211
           LY    F  D +VA+S+FWYF+ QL +R K    EI   +  ++K+ L
Sbjct: 227 LYKMRIFAPDDVVARSKFWYFISQL-KRMKKSQGEIVSCQQIYEKKPL 273


>SB_3589| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 179

 Score = 29.9 bits (64), Expect = 0.69
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -1

Query: 300 TTQVHGIHGTYCGHQSETRNATRYQSSNLNRTLF 199
           T Q+H    T+C HQ+++ + T +Q+ + + T F
Sbjct: 38  TLQIHQTDSTHCTHQTDSAHCTDHQTDSAHYTDF 71


>SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 477

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -1

Query: 282 IHGTYCGHQSETRNATRYQSSNLNRTLFWNFPLRIPISXQ*SF*RSXNCLKKYQ 121
           +H  +  HQ         QSS+LN+ L W   +++P+  Q SF R  N    Y+
Sbjct: 358 VHEKHRPHQCNECGKRFSQSSSLNKHLRWRETVQVPLLQQ-SFHRFVNSTNPYK 410


>SB_40645| Best HMM Match : zf-C2H2 (HMM E-Value=3.30006e-42)
          Length = 554

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -3

Query: 148 FXQLPQEIPET-RFCHNRIREKSSFCIEEALARSPKGARPMTILFQSPSP 2
           F +LP E+P +   C        S C EE LA  P  A P+  L  SPSP
Sbjct: 39  FTELPAELPASFTMC--------SPCTEEDLAVEPDIAFPLGCLVMSPSP 80


>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
          Length = 1728

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +1

Query: 175 WYPQGEIPEKSPVKIRTLVSGCVTSLALVSTICTVNTVNLSGRCAVISAIEIW 333
           WYPQG++   +P K   LV+  + +   +  I   +T  ++G  A      +W
Sbjct: 154 WYPQGKVVFMAPTK--PLVAQQIEACYKIMGIPQTDTAEMTGNMAPTKRENLW 204


>SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15)
          Length = 1224

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 300 TTQVHGIHGTYCGHQSETRNATRYQSSNLNRTL 202
           T  VH I  T+ GH+ +   A  Y +S+ N  +
Sbjct: 543 TASVHVIESTFTGHRYDGNGAVLYLASSFNAVI 575


>SB_1872| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1801

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 205 SPVKIRTLVSGCVTSLALVSTICTVNTVNLSGRCAV 312
           SP+   TL++ C++ L+ ++ IC + T  +   C +
Sbjct: 257 SPLARTTLLNRCISDLSFLAQICEMVTSGVESGCPI 292


>SB_39164| Best HMM Match : RNB (HMM E-Value=0)
          Length = 597

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 142 QLPQEIPETRFCHNR-IREKSSFCIEEALAR 53
           + P  IPET F H R  R++  F I+   AR
Sbjct: 329 ETPWSIPETEFAHRRDFRDECVFTIDPLTAR 359


>SB_59517| Best HMM Match : Cu-oxidase_2 (HMM E-Value=1e-06)
          Length = 203

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = -3

Query: 190 PLEDTNFTPVVFLTFXQLPQEIPETRF--CH--NRIREKSSFCIEEALARSP 47
           PL+DT   P    T  +L +E P   F  CH  N + E  +  + E+ A+ P
Sbjct: 49  PLKDTVVVPSFGYTVVRLSKENPGYWFVHCHVGNHMTEGMALILNESFAKQP 100


>SB_35530| Best HMM Match : Pinin_SDK_memA (HMM E-Value=2.4)
          Length = 170

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 5  RRRLKEYSHRPSSLRRASQSL 67
          RRR+KE+  RP +L   +QSL
Sbjct: 17 RRRMKEHKTRPKALAALNQSL 37


>SB_53046| Best HMM Match : Cu-oxidase_3 (HMM E-Value=2.8e-31)
          Length = 570

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = -3

Query: 190 PLEDTNFTPVVFLTFXQLPQEIPETRF--CH--NRIREKSSFCIEEALARSP 47
           PL+DT   P    T  +L +E P   F  CH  N + E  +  + E+ A+ P
Sbjct: 416 PLKDTVVVPSFGYTVVRLSKENPGYWFVHCHVGNHMTEGMALILNESFAKQP 467


>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1019

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 5   RRRLKEYSHRPSSLRRASQSL 67
           RRR+KE+  RP +L   +QSL
Sbjct: 789 RRRMKEHKTRPKALAALNQSL 809


>SB_14386| Best HMM Match : Ion_trans_2 (HMM E-Value=2.4e-11)
          Length = 556

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 157 FLTFXQLPQEIPETRFCHNRIREKSSFCIEEALARSPKGARP 32
           + T  Q     P+T    N++   SS  +E A+ R+P    P
Sbjct: 59  YFTKAQFQCNCPQTNLLFNKLNVSSSSAMEIAIRRTPYNTPP 100


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,441,149
Number of Sequences: 59808
Number of extensions: 190649
Number of successful extensions: 543
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 607387585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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