Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D24
         (496 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC078159-1|AAH78159.1|  466|Homo sapiens FBXO38 protein protein.       31   1.7  
BC056147-1|AAH56147.1|  426|Homo sapiens FBXO38 protein protein.       31   1.7  
BC050424-1|AAH50424.1|  943|Homo sapiens FBXO38 protein protein.       31   1.7  
BC033454-1|AAH33454.1| 1113|Homo sapiens F-box protein 38 protein.     31   1.7  
BC015366-1|AAH15366.1|  459|Homo sapiens FBXO38 protein protein.       31   1.7  
BC005873-1|AAH05873.1|  768|Homo sapiens FBXO38 protein protein.       31   1.7  
BC005849-1|AAH05849.1|  768|Homo sapiens FBXO38 protein protein.       31   1.7  
AF251055-1|AAK34945.1|  772|Homo sapiens 5-HT receptor protein.        31   1.7  
AF177339-1|AAG17983.1|  444|Homo sapiens unknown protein.              31   1.7  
AF095770-1|AAD25980.1|  273|Homo sapiens PTH-responsive osteosar...    31   1.7  

>BC078159-1|AAH78159.1|  466|Homo sapiens FBXO38 protein protein.
          Length = 466

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 123 RTKILKFLKDRNQPGLHRFELRSCKILMIEQI 218
           R ++LK LK  N P ++RF+   CK L ++Q+
Sbjct: 233 RCRVLKHLKVENAPIVNRFDYAQCKKLNMDQV 264


>BC056147-1|AAH56147.1|  426|Homo sapiens FBXO38 protein protein.
          Length = 426

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 123 RTKILKFLKDRNQPGLHRFELRSCKILMIEQI 218
           R ++LK LK  N P ++RF+   CK L ++Q+
Sbjct: 193 RCRVLKHLKVENAPIVNRFDYAQCKKLNMDQV 224


>BC050424-1|AAH50424.1|  943|Homo sapiens FBXO38 protein protein.
          Length = 943

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 123 RTKILKFLKDRNQPGLHRFELRSCKILMIEQI 218
           R ++LK LK  N P ++RF+   CK L ++Q+
Sbjct: 710 RCRVLKHLKVENAPIVNRFDYAQCKKLNMDQV 741


>BC033454-1|AAH33454.1| 1113|Homo sapiens F-box protein 38 protein.
          Length = 1113

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 123 RTKILKFLKDRNQPGLHRFELRSCKILMIEQI 218
           R ++LK LK  N P ++RF+   CK L ++Q+
Sbjct: 880 RCRVLKHLKVENAPIVNRFDYAQCKKLNMDQV 911


>BC015366-1|AAH15366.1|  459|Homo sapiens FBXO38 protein protein.
          Length = 459

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 123 RTKILKFLKDRNQPGLHRFELRSCKILMIEQI 218
           R ++LK LK  N P ++RF+   CK L ++Q+
Sbjct: 226 RCRVLKHLKVENAPIVNRFDYAQCKKLNMDQV 257


>BC005873-1|AAH05873.1|  768|Homo sapiens FBXO38 protein protein.
          Length = 768

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 123 RTKILKFLKDRNQPGLHRFELRSCKILMIEQI 218
           R ++LK LK  N P ++RF+   CK L ++Q+
Sbjct: 535 RCRVLKHLKVENAPIVNRFDYAQCKKLNMDQV 566


>BC005849-1|AAH05849.1|  768|Homo sapiens FBXO38 protein protein.
          Length = 768

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 123 RTKILKFLKDRNQPGLHRFELRSCKILMIEQI 218
           R ++LK LK  N P ++RF+   CK L ++Q+
Sbjct: 535 RCRVLKHLKVENAPIVNRFDYAQCKKLNMDQV 566


>AF251055-1|AAK34945.1|  772|Homo sapiens 5-HT receptor protein.
          Length = 772

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 123 RTKILKFLKDRNQPGLHRFELRSCKILMIEQI 218
           R ++LK LK  N P ++RF+   CK L ++Q+
Sbjct: 539 RCRVLKHLKVENAPIVNRFDYAQCKKLNMDQV 570


>AF177339-1|AAG17983.1|  444|Homo sapiens unknown protein.
          Length = 444

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 123 RTKILKFLKDRNQPGLHRFELRSCKILMIEQI 218
           R ++LK LK  N P ++RF+   CK L ++Q+
Sbjct: 211 RCRVLKHLKVENAPIVNRFDYAQCKKLNMDQV 242


>AF095770-1|AAD25980.1|  273|Homo sapiens PTH-responsive
           osteosarcoma D1 protein protein.
          Length = 273

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -1

Query: 205 IKILHDLSSNRCKPGWFLSFKNFNI 131
           IK+L DLSS+R  PG FLS  N ++
Sbjct: 2   IKVLRDLSSDRSNPGRFLSTSNSSL 26


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,718,448
Number of Sequences: 237096
Number of extensions: 660434
Number of successful extensions: 853
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)