Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D20
         (337 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.28 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   1.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   1.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   1.5  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.0  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.0  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   6.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.28
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -2

Query: 213 ITYWYEFHFVFQVHC---VC-GRFYFIHPVIICGYLPFFVRI 100
           I Y+Y    +F VH    VC   FY++H +  C ++ F + +
Sbjct: 238 IYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHL 279


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 177 VHCVCGRFYFIHPVIICGYLPFFV 106
           +H V   +Y +  V   GYLPF +
Sbjct: 280 LHLVVTPYYLLIEVCNAGYLPFIL 303


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -2

Query: 207 YWYEFHFVFQVHCVCGRFYFIHPVIICGYLPF 112
           YW  FH  F  H V G    IH      Y PF
Sbjct: 666 YWL-FHCHFLFHIVIGMNLIIHVGTQLIYRPF 696



 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 72  LVVGFNVIGHFFPTTFHHPLSH 7
           +V+G N+I H      + P SH
Sbjct: 677 IVIGMNLIIHVGTQLIYRPFSH 698


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 189 SGIRTNTLLSDILFYLKSSFFFLM 260
           SG+ + T++  +L +   SF FLM
Sbjct: 61  SGVTSPTIMKFVLSFRTGSFTFLM 84


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 189 SGIRTNTLLSDILFYLKSSFFFLM 260
           SG+ + T++  +L +   SF FLM
Sbjct: 61  SGVTSPTIMKFVLSFRTGSFTFLM 84


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 100 DTDKERQISTNDNWMN 147
           D D++ QI T + W+N
Sbjct: 42  DVDEKNQILTTNAWLN 57


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 100 DTDKERQISTNDNWMN 147
           D D++ QI T + W+N
Sbjct: 42  DVDEKNQILTTNAWLN 57


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 100 DTDKERQISTNDNWMN 147
           D D++ QI T + W+N
Sbjct: 42  DVDEKNQILTTNAWLN 57


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 155 KRPHTQW 175
           KRPH QW
Sbjct: 232 KRPHDQW 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,688
Number of Sequences: 336
Number of extensions: 1197
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)