Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D20
         (337 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   1.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   1.3  
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             23   4.1  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   4.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   5.4  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    22   7.1  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 207  YWYEFHFVFQVHCVCGRFYF 148
            Y+ E+H   Q HCV  ++YF
Sbjct: 1878 YFTEYHQKAQQHCVKPQYYF 1897


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 49  NHVETDNQ-DADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKD 186
           ++ ET+++   D  + +  TD   +I  NDN   +   T   VD+KD
Sbjct: 684 SYAETNHKGQRDFDLTQDCTDDAGKIKHNDNPFIEPAQTQTVVDMKD 730


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -3

Query: 167 YVVASTLFIQLSFVDICRSLSVSPLAT 87
           + +A T ++ ++F  I ++  +SPLAT
Sbjct: 79  WFMAWTPYLVINFTGIFKAAPISPLAT 105


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 207 YWYEFHFVFQVHCVCGRFYFIH 142
           YW  FH  FQ H V G    +H
Sbjct: 708 YWL-FHCHFQFHIVIGMNLVVH 728


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +1

Query: 16   GMMESSREEMTNHVETDNQDADI--GVARGDTDKERQISTNDNWMNKVEAT 162
            G+ ES+   M      D+   ++  GV   +T  E  + + +NW N  EAT
Sbjct: 1021 GVAESAEHAMFECPRFDSTRTELLHGVVP-ETLLEHMLQSPENWSNVCEAT 1070


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 100 DTDKERQISTNDNWMN 147
           D D++ QI T + W+N
Sbjct: 62  DVDEKNQILTTNAWLN 77


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,978
Number of Sequences: 2352
Number of extensions: 4350
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)