Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D20
(337 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 30 0.47
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 30 0.47
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 28 1.9
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 1.9
AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin... 27 2.5
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 27 3.3
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 27 3.3
Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical pr... 27 4.4
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 29.9 bits (64), Expect = 0.47
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 16 GMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKD 186
G ++ +EE N +D++DAD+ D D+E +I DN ++++ +D D
Sbjct: 753 GSLDGDQEEY-NSKSSDSEDADLDDDDEDDDEEAEIQIIDNGESQLKLAMDRIDRLD 808
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
a protein.
Length = 960
Score = 29.9 bits (64), Expect = 0.47
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 16 GMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKD 186
G ++ +EE N +D++DAD+ D D+E +I DN ++++ +D D
Sbjct: 790 GSLDGDQEEY-NSKSSDSEDADLDDDDEDDDEEAEIQIIDNGESQLKLAMDRIDRLD 845
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
C18D4.2b protein.
Length = 1376
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = +1
Query: 7 VTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKD 186
+T+ + +S + TN ++ R T +ER + N NK+ T L D
Sbjct: 1019 ITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTIKQSLLD 1078
Query: 187 EVE 195
++
Sbjct: 1079 SID 1081
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = +1
Query: 7 VTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKD 186
+T+ + +S + TN ++ R T +ER + N NK+ T L D
Sbjct: 1019 ITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTIKQSLLD 1078
Query: 187 EVE 195
++
Sbjct: 1079 SID 1081
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = +1
Query: 7 VTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKD 186
+T+ + +S + TN ++ R T +ER + N NK+ T L D
Sbjct: 1019 ITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTIKQSLLD 1078
Query: 187 EVE 195
++
Sbjct: 1079 SID 1081
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = +1
Query: 7 VTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKD 186
+T+ + +S + TN ++ R T +ER + N NK+ T L D
Sbjct: 1019 ITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTIKQSLLD 1078
Query: 187 EVE 195
++
Sbjct: 1079 SID 1081
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 7 VTEGMMESSREEMTNHVETDN---QDADIGVARGDTDKERQISTNDNWMNK 150
+ + + E+S EE V+ D+ +DAD G+ GD+ K++ N + K
Sbjct: 1340 IEDCIREASNEEAQRKVKEDDDDGEDADGGLGGGDSGKKKSSKNKKNNLKK 1390
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 7 VTEGMMESSREEMTNHVETDN---QDADIGVARGDTDKERQISTNDNWMNK 150
+ + + E+S EE V+ D+ +DAD G+ GD+ K++ N + K
Sbjct: 1329 IEDCIREASNEEAQRKVKEDDDDGEDADGGLGGGDSGKKKSSKNKKNNLKK 1379
>AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin
protein 20 protein.
Length = 417
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 63 GFNVIGHFFPTTFHHPLSHRN 1
GF ++G+ FH PLSH+N
Sbjct: 26 GFTLVGNKCLKLFHEPLSHKN 46
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 27.1 bits (57), Expect = 3.3
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 PVTEGMMES-SREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDL 180
PV +G +RE + + + D D+ + GD+ ERQ S + W+ +V +T +
Sbjct: 204 PVYDGKRNMYTREPLP--IGRERMDFDVTLP-GDSAVERQFSVSLKWVGQVSLSTLEDAM 260
Query: 181 KDEVEFVP 204
+ V VP
Sbjct: 261 EGRVRQVP 268
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 27.1 bits (57), Expect = 3.3
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 PVTEGMMES-SREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDL 180
PV +G +RE + + + D D+ + GD+ ERQ S + W+ +V +T +
Sbjct: 204 PVYDGKRNMYTREPLP--IGRERMDFDVTLP-GDSAVERQFSVSLKWVGQVSLSTLEDAM 260
Query: 181 KDEVEFVP 204
+ V VP
Sbjct: 261 EGRVRQVP 268
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 27.1 bits (57), Expect = 3.3
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 PVTEGMMES-SREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDL 180
PV +G +RE + + + D D+ + GD+ ERQ S + W+ +V +T +
Sbjct: 212 PVYDGKRNMYTREPLP--IGRERMDFDVTLP-GDSAVERQFSVSLKWVGQVSLSTLEDAM 268
Query: 181 KDEVEFVP 204
+ V VP
Sbjct: 269 EGRVRQVP 276
>Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical
protein C05B5.2 protein.
Length = 385
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 216 LITYWYEFHFVFQVHCVCGRFYFIHPVIICGYLP 115
++T W++F VF+ HC ++ F+ + I G +P
Sbjct: 272 MLTGWFDF--VFRKHCFLKKYGFLVAMGIAGNVP 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,873,041
Number of Sequences: 27780
Number of extensions: 102854
Number of successful extensions: 319
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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