Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D18
(323 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.09 |||3-hydroxyisobutyryl-CoA hydrolase|Schizosaccharom... 37 7e-04
SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 0.13
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 0.93
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 1.6
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 1.6
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 25 2.8
SPBC2G5.02c |||CK2 family regulatory subunit |Schizosaccharomyce... 24 4.9
SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces po... 24 6.5
SPBC365.06 |pmt3|ubl2, smt3|SUMO|Schizosaccharomyces pombe|chr 2... 24 6.5
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 23 8.6
>SPBC2D10.09 |||3-hydroxyisobutyryl-CoA
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 37.1 bits (82), Expect = 7e-04
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 49 SNTVLVKFYSAAPVYENIKIDVV--GSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDF 222
S+T+ F Y D V SK + LNRPK LNA+ + + +
Sbjct: 36 SSTMSRAFIRNPKFYSTSSNDTVLYESKNGARIFTLNRPKVLNAINVDMIDSILPKLVSL 95
Query: 223 DADPTIAAIVLTGNEKAFAAGADI 294
+ I+L GN ++F++G DI
Sbjct: 96 EESNLAKVIILKGNGRSFSSGGDI 119
>SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 230
Score = 29.5 bits (63), Expect = 0.13
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -1
Query: 290 SAPAAKAFSLPVSTIAAMVGSASKSLTALPSSTNSGLQRAFSALGRFSCIRPTFFFEPTT 111
S+P++ + S T S S + SSTN+ + + S + + I+PT + TT
Sbjct: 76 SSPSSTSTSSSSGTSVITASDVSASNEIISSSTNNSIHQQVSVVTEYVTIQPTTYV--TT 133
Query: 110 SILIFSYTGAA 78
IF YT A
Sbjct: 134 ---IFQYTSLA 141
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 26.6 bits (56), Expect = 0.93
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -1
Query: 290 SAPAAKAFSLPVSTIAAMVGSASKSLTALPSSTNSGLQ----RAFSALGRFSCIRPTFFF 123
S ++ + S+P S+ +A ++ S + +PSS++S L A S+ S + + F
Sbjct: 13 SLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFT 72
Query: 122 EPTTSILIFSYTGAA 78
P +S I S ++
Sbjct: 73 SPASSSFITSLVSSS 87
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 1.6
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -1
Query: 311 LFCISVISAPAAKAFSLPVSTIAAMVGSASKSLTALPSSTN 189
L+ + ++AP S+PVST S+S+ T+ P++++
Sbjct: 115 LYTMDNVTAPVWSNTSVPVSTPETSATSSSEFFTSYPATSS 155
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.8 bits (54), Expect = 1.6
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = -1
Query: 299 SVISAPAAKAFSLPVSTIAAMVGSASKSLTALPSSTNSGLQRAFSALGRFSCIRPTFFFE 120
S++S+ + + S ST ++ S+S S ++ S++S + + + R + R T
Sbjct: 127 SLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRTTSHKS 186
Query: 119 PTTSILIFSYTGAAL*NLT 63
+ +F YT + N+T
Sbjct: 187 SSYRPTVFPYTTISHYNIT 205
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.0 bits (52), Expect = 2.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 232 PTIAAIVLTGNEKAFAAGADITEMQNNTIQ 321
P+I + L GNE A+ G +T N ++
Sbjct: 626 PSIEELTLEGNEIAYLTGCPVTIRDLNAVE 655
>SPBC2G5.02c |||CK2 family regulatory subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 254
Score = 24.2 bits (50), Expect = 4.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 321 LYGIILHFRNISTRCESLLVTSQYNSGNGWICIEVVDCFTEL 196
LYG+I H R I TR + +Y+ G C V C+T +
Sbjct: 109 LYGLI-HQRYIITRTGLHQMAEKYSMGIFGCCPRVNCCYTHV 149
>SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 23.8 bits (49), Expect = 6.5
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 186 WFAESVQCFGAIQLYK-AYIFF*TDHINLDIF 94
W+ S+ F A+ L + A FF TD +L ++
Sbjct: 345 WYGASISIFFALILLRTAIFFFGTDRYSLPLY 376
>SPBC365.06 |pmt3|ubl2, smt3|SUMO|Schizosaccharomyces pombe|chr
2|||Manual
Length = 117
Score = 23.8 bits (49), Expect = 6.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 85 PVYENIKIDVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVN 216
P E+I + VVG N ++ + + L K GK++N
Sbjct: 31 PSTEHINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMN 74
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 23.4 bits (48), Expect = 8.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 159 GAIQLYKAYIFF*TDHINL 103
G++++Y AY+ DH NL
Sbjct: 358 GSMEVYSAYLHIIRDHYNL 376
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,397,707
Number of Sequences: 5004
Number of extensions: 26823
Number of successful extensions: 82
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 87815546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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