Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D18
(323 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 62 1e-10
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 41 3e-04
06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908 41 3e-04
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 38 0.002
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107... 38 0.002
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 37 0.004
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 35 0.017
01_06_0729 - 31546464-31546574,31546653-31546694,31546795-315468... 33 0.051
02_05_0881 + 32473208-32473575,32473742-32473826,32473991-324740... 31 0.27
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 30 0.36
09_04_0127 + 14883661-14884226,14884335-14885235 28 1.9
03_05_0750 - 27383848-27383940,27384016-27384137,27384525-273845... 27 2.6
02_05_0410 + 28744716-28744841,28745361-28745965,28746151-287462... 27 2.6
09_02_0455 + 9517802-9518121,9518177-9518423,9518517-9518804 27 4.5
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 27 4.5
07_01_0548 - 4061829-4062956 26 5.9
07_01_0469 - 3552409-3553368 26 5.9
03_06_0560 + 34726338-34727243 26 5.9
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 26 5.9
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 61.7 bits (143), Expect = 1e-10
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 133 VGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIT 297
V ++ +NRPKALNAL +P+ V L A DAD +AA+VL G +AF +G D+T
Sbjct: 23 VAVVTINRPKALNALTRPMMVSLAAAFRRLDADDGVAAVVLAGRGRAFCSGVDLT 77
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 40.7 bits (91), Expect = 3e-04
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 112 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGAD 291
+V K + LNRP LNAL + L K ++ +P I +++ G+ +AF AG D
Sbjct: 49 LVEGKASARAAVLNRPGHLNALTTTMGARLNKFYMSWEDNPDIGFVMMKGSGRAFCAGGD 108
Query: 292 ITEM 303
+ +
Sbjct: 109 VVRL 112
>06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908
Length = 88
Score = 40.7 bits (91), Expect = 3e-04
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 76 SAAPVYENIKIDVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVL 255
+AA E +K V + V +I L+RPKALNA+ + + +++++ +P++ +++
Sbjct: 2 AAAAAEEFVKGRV--TPNGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLV 59
Query: 256 -TGNEKAFAAGADITEMQNN 312
+ + +AF+AG D+ + N+
Sbjct: 60 ESSSPRAFSAGGDVKRLAND 79
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 148 LNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADI 294
LNRPK LNAL + + ++ D + +++ G +AF AG D+
Sbjct: 154 LNRPKQLNALSSAMITCFLRCFTAYEEDDGVKLLIVKGKGRAFCAGGDV 202
>10_08_1007 -
22210263-22210400,22210506-22210547,22210626-22210727,
22212239-22212337,22212413-22212473,22213311-22213432,
22217700-22217786,22217958-22218041,22218141-22218220,
22218404-22218467,22218904-22218972,22219099-22219179,
22219626-22219694,22220108-22220140
Length = 376
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 148 LNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADI 294
+NRPK LNAL + + ++ D + +++ G +AF AG D+
Sbjct: 48 MNRPKQLNALSSAMITGFLRCFTAYEEDEGVKLLIVKGKGRAFCAGGDV 96
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 142 IQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGN-EKAFAAGADITE 300
++L RP+A NA+ + + L A+ AD T ++L + K F AGAD+ E
Sbjct: 57 MRLERPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLKE 110
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 34.7 bits (76), Expect = 0.017
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 127 KNVGLIQLNRPKALNALCKPLFV-ELGKAVNDFDADPTIAAIVLTG-NEKAFAAGAD 291
+ + I +NRP NA +PL V EL +A D D +I I+LTG ++F +G D
Sbjct: 79 EGIAKITINRPDRRNAF-RPLTVKELMRAFEDARDDSSIGVIILTGKGTQSFCSGGD 134
>01_06_0729 -
31546464-31546574,31546653-31546694,31546795-31546896,
31547148-31547246,31547522-31547582,31547659-31547807,
31547963-31548048,31548249-31548333,31548642-31548725,
31548820-31548893,31549035-31549095,31549546-31549614,
31549712-31549795,31549893-31549937
Length = 383
Score = 33.1 bits (72), Expect = 0.051
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 148 LNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADI 294
LNRP+ LN + + L + + ++ D ++ G +AF+AG D+
Sbjct: 30 LNRPRQLNVISDRVVYLLAQFLESWEKDEDAKLVIFKGAGRAFSAGGDL 78
>02_05_0881 +
32473208-32473575,32473742-32473826,32473991-32474053,
32474199-32474241,32474737-32474796,32475001-32475301,
32475554-32475668,32476168-32476272,32476338-32476517
Length = 439
Score = 30.7 bits (66), Expect = 0.27
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 246 SGNGWICI-EVVDCFTELHKQWFAESVQ 166
SG GWICI + CF EL+ F +VQ
Sbjct: 303 SGGGWICIVRFIGCFDELNHYLFFVNVQ 330
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 30.3 bits (65), Expect = 0.36
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 142 IQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGN-EKAFAAGADITEMQNNTI 318
++L RP+ NA+ L V +AD T+ +++T + F AGAD+ + TI
Sbjct: 50 LRLERPEVKNAINWEAMRLLRGVVEKVEADDTVKVVLVTSSVPGVFCAGADLKALSIPTI 109
>09_04_0127 + 14883661-14884226,14884335-14885235
Length = 488
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 61 LVKFYSAAPVYENIKIDVVGSKKNVGLIQLNRPKALNA-LCKPLFVELGKAVNDFDADPT 237
LV+ + AAP E + D + + N+ + N P L+A L L +G A AD
Sbjct: 244 LVRAFEAAPTTEQARHDALRALLNLSIAPANAPHLLSAGLAPSLVAAVGDA--PAAADRA 301
Query: 238 IAAI 249
+AA+
Sbjct: 302 LAAL 305
>03_05_0750 -
27383848-27383940,27384016-27384137,27384525-27384578,
27384682-27384783,27386838-27387087
Length = 206
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 291 ISTRCESLLVTSQYNSGNGW 232
IS RC+++ NSGNGW
Sbjct: 30 ISRRCDAVSAVGGANSGNGW 49
>02_05_0410 +
28744716-28744841,28745361-28745965,28746151-28746270,
28746597-28746737,28748626-28749370
Length = 578
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 290 SAPAAKAFSLPVSTIAAMVGSASKSLTALPSSTNSGLQRAFSA 162
SA A A ++PV AAMVG++S+ AL +T ++ A +A
Sbjct: 429 SAAATTAATVPVKEEAAMVGTSSE---ALAKTTQKSMEDAAAA 468
>09_02_0455 + 9517802-9518121,9518177-9518423,9518517-9518804
Length = 284
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 43 AVSNTVLVKFYSAAPVYENIKIDVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDF 222
A+ VLV+ +A + ++ +DV + NV + RP+ L VE + +F
Sbjct: 179 ALEQMVLVRHQAARALVSDVDVDVDAAHHNVVAVPTRRPEELRG-----GVEGEERTAEF 233
Query: 223 DADPTIAAIVL 255
+ +AAI L
Sbjct: 234 HVEEIVAAIRL 244
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 124 KKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADI 294
+ V +I ++ P +NAL + L + + + AIVLTG + F+ G DI
Sbjct: 12 RDGVAVITVSNPP-VNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGRFSGGFDI 67
>07_01_0548 - 4061829-4062956
Length = 375
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 284 PAAKAFSLPVSTIAAMVGSASKSLTALPSSTNSGLQRAFSAL 159
PAA A L + + AA + SA + + N LQRA+ AL
Sbjct: 11 PAAAALLLLLLSAAAQLCSACPPAASQTAENNPRLQRAYVAL 52
>07_01_0469 - 3552409-3553368
Length = 319
Score = 26.2 bits (55), Expect = 5.9
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 290 SAPAAKAFS-LPVSTIAAMVGSASKSLTALPSSTNSG 183
+ PAA A + +PVS A+ + A S +PSS N G
Sbjct: 225 AVPAAPALAPVPVSAPASALSFAPASAVRVPSSGNGG 261
>03_06_0560 + 34726338-34727243
Length = 301
Score = 26.2 bits (55), Expect = 5.9
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 202 GKAVNDFDADPTIAAIVLTGNEKAFAAGA-DIT 297
GK ++DF+A + LTGN + AAG+ DIT
Sbjct: 251 GKVMHDFEAPAWRVSWSLTGNILSVAAGSGDIT 283
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 26.2 bits (55), Expect = 5.9
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 302 ISVISAPAAKAF-SLPVSTIAAMVGSASKSLTALPSSTNSGLQRAFSALGRFSCIRPTF 129
+S+IS A AF S PV+ AM+ + + + TN +R S L R S TF
Sbjct: 1652 VSMISPGWAAAFASPPVAMALAMIAAGTSGTETIAPPTNKLRRRDTSLLERRSAKLHTF 1710
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,690,787
Number of Sequences: 37544
Number of extensions: 164376
Number of successful extensions: 467
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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