BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0002_D17 (139 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637 32 0.074 11_05_0013 + 18383235-18383702,18385570-18386571 27 2.8 05_02_0120 - 6797954-6798970,6799466-6799951 27 2.8 02_01_0097 + 712586-713035,714120-715080,715577-715746 27 2.8 03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594 26 3.7 07_03_1176 + 24567720-24570932 26 4.8 09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450... 25 6.4 07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852... 25 6.4 06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26... 25 6.4 04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142... 25 6.4 10_08_0338 + 16916429-16916650,16916728-16917900 25 8.5 09_06_0322 - 22329897-22330078,22330569-22331928 25 8.5 02_02_0687 + 12969381-12969848,12969961-12970992 25 8.5 01_03_0055 + 12074512-12076155 25 8.5 >07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637 Length = 309 Score = 31.9 bits (69), Expect = 0.074 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%) Frame = +3 Query: 36 RYDPSRYDPGRYEAGRYNPGRXDN--SGRYDPSSD 134 RY RYD GRY RY G D + RY P++D Sbjct: 182 RYVDDRYDGGRYVDDRYGGGGRDRYATDRYPPTAD 216 >11_05_0013 + 18383235-18383702,18385570-18386571 Length = 489 Score = 26.6 bits (56), Expect = 2.8 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = +3 Query: 30 PGRYDPSRYDPGRYE 74 P YDP RY PGR E Sbjct: 398 PDSYDPDRYAPGREE 412 >05_02_0120 - 6797954-6798970,6799466-6799951 Length = 500 Score = 26.6 bits (56), Expect = 2.8 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +3 Query: 42 DPSRYDPGRYEAGR 83 DP +DPGR+ AGR Sbjct: 413 DPGEFDPGRFGAGR 426 Score = 26.2 bits (55), Expect = 3.7 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +3 Query: 57 DPGRYEAGRYNPGRXDNSG 113 DPG ++ GR+ GR + +G Sbjct: 413 DPGEFDPGRFGAGREEGAG 431 Score = 25.4 bits (53), Expect = 6.4 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%) Frame = +3 Query: 9 ALPKTVA-PGRYDPSRYDPGRYE 74 ALP+ PG +DP R+ GR E Sbjct: 406 ALPRVYRDPGEFDPGRFGAGREE 428 >02_01_0097 + 712586-713035,714120-715080,715577-715746 Length = 526 Score = 26.6 bits (56), Expect = 2.8 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +3 Query: 30 PGRYDPSRYDPGRYE 74 P YDPSR+ PGR E Sbjct: 395 PNVYDPSRFGPGREE 409 >03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594 Length = 323 Score = 26.2 bits (55), Expect = 3.7 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%) Frame = +3 Query: 51 RYDPGRYEAG--RYNPGRXDNSGRYDPSS 131 RY RY +G RY P R RY PSS Sbjct: 204 RYANDRYPSGGDRYVPDRYGGPDRYQPSS 232 >07_03_1176 + 24567720-24570932 Length = 1070 Score = 25.8 bits (54), Expect = 4.8 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +2 Query: 5 HGFAQNCCTWPLRSIPL 55 H FAQN T P++S+PL Sbjct: 449 HSFAQNNFTGPVKSLPL 465 >09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328, 4505963-4506306,4506383-4506487,4507907-4508288, 4509173-4509437,4509936-4510094,4511150-4511201, 4511266-4511462,4512865-4513350,4513797-4514093 Length = 860 Score = 25.4 bits (53), Expect = 6.4 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = +3 Query: 30 PGRYDPSRYDPGRYEAGRYNPGRXDNSGRYDPS 128 PG+Y + Y PG + + G G YD S Sbjct: 693 PGKYPTNTYKPGANNGTQTHVGNHGAYGTYDSS 725 >07_03_1116 - 24084162-24084201,24084481-24084570,24084640-24085220, 24085653-24085822,24086006-24087074 Length = 649 Score = 25.4 bits (53), Expect = 6.4 Identities = 11/44 (25%), Positives = 19/44 (43%) Frame = +3 Query: 3 STALPKTVAPGRYDPSRYDPGRYEAGRYNPGRXDNSGRYDPSSD 134 S + P PG P+ Y+ +++ PG +G Y +D Sbjct: 542 SASKPYQYTPGSVAPASYNSNQFKVAYGGPGAPPTAGGYGSYND 585 >06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-268460, 268779-268843,268854-269073,269163-269438,269547-269663, 269776-269853,269930-270184,270235-270323,270403-270816 Length = 865 Score = 25.4 bits (53), Expect = 6.4 Identities = 10/33 (30%), Positives = 19/33 (57%) Frame = -2 Query: 120 RSDLSCRSVPGCNDRLHNGQGRSGMDRNGQVQQ 22 ++ L+C PGC + GR+ +++ QVQ+ Sbjct: 392 KTSLTCLLSPGCGFNIFRIFGRTEVNQEAQVQE 424 >04_04_1500 + 34010819-34011016,34013267-34013308,34014195-34014204, 34014526-34014586,34014621-34014678,34015266-34015412, 34015643-34016205,34018942-34019728 Length = 621 Score = 25.4 bits (53), Expect = 6.4 Identities = 10/36 (27%), Positives = 15/36 (41%) Frame = -2 Query: 129 CWGRSDLSCRSVPGCNDRLHNGQGRSGMDRNGQVQQ 22 CW + S ++P + G G D NG V + Sbjct: 290 CWLEEETSAGALPAAGEGEDGGNGNGDGDGNGAVNE 325 >10_08_0338 + 16916429-16916650,16916728-16917900 Length = 464 Score = 25.0 bits (52), Expect = 8.5 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +3 Query: 9 ALPKTVAPGRYDPSRYDPGRYEAGRYNPGRXDNSGRYDPSSD 134 ALP+ PG R G + N G NSG YD D Sbjct: 203 ALPREANPGSGSGGRSMGGGGGGYQSNNGPNSNSGGYDSRGD 244 >09_06_0322 - 22329897-22330078,22330569-22331928 Length = 513 Score = 25.0 bits (52), Expect = 8.5 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -2 Query: 105 CRSVPGCNDRLHNGQGRSGMDRNGQVQQFWAK 10 C P +RLH G +D NG V F AK Sbjct: 371 CHPTPTL-ERLHIGHPLLSLDNNGDVVYFMAK 401 >02_02_0687 + 12969381-12969848,12969961-12970992 Length = 499 Score = 25.0 bits (52), Expect = 8.5 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = +3 Query: 3 STALPKTVAPGRY-DPSRYDPGRYEAGR 83 S + T+ P Y DP +DP R+ AGR Sbjct: 394 SPLVVNTLLPNIYKDPHVFDPDRFAAGR 421 >01_03_0055 + 12074512-12076155 Length = 547 Score = 25.0 bits (52), Expect = 8.5 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -2 Query: 93 PGCNDRLHNGQGRSGMDRNGQVQQFWAKPWT 1 PG +D + NG G+ G+ + Q PWT Sbjct: 72 PGHDDGMGNGAGKGGVVQQQQQPGSVGCPWT 102 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,880,207 Number of Sequences: 37544 Number of extensions: 56048 Number of successful extensions: 228 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 227 length of database: 14,793,348 effective HSP length: 26 effective length of database: 13,817,204 effective search space used: 262526876 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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