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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D17
         (139 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637           32   0.074
11_05_0013 + 18383235-18383702,18385570-18386571                       27   2.8  
05_02_0120 - 6797954-6798970,6799466-6799951                           27   2.8  
02_01_0097 + 712586-713035,714120-715080,715577-715746                 27   2.8  
03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594     26   3.7  
07_03_1176 + 24567720-24570932                                         26   4.8  
09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450...    25   6.4  
07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852...    25   6.4  
06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26...    25   6.4  
04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142...    25   6.4  
10_08_0338 + 16916429-16916650,16916728-16917900                       25   8.5  
09_06_0322 - 22329897-22330078,22330569-22331928                       25   8.5  
02_02_0687 + 12969381-12969848,12969961-12970992                       25   8.5  
01_03_0055 + 12074512-12076155                                         25   8.5  

>07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637
          Length = 309

 Score = 31.9 bits (69), Expect = 0.074
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 36  RYDPSRYDPGRYEAGRYNPGRXDN--SGRYDPSSD 134
           RY   RYD GRY   RY  G  D   + RY P++D
Sbjct: 182 RYVDDRYDGGRYVDDRYGGGGRDRYATDRYPPTAD 216


>11_05_0013 + 18383235-18383702,18385570-18386571
          Length = 489

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 30  PGRYDPSRYDPGRYE 74
           P  YDP RY PGR E
Sbjct: 398 PDSYDPDRYAPGREE 412


>05_02_0120 - 6797954-6798970,6799466-6799951
          Length = 500

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  DPSRYDPGRYEAGR 83
           DP  +DPGR+ AGR
Sbjct: 413 DPGEFDPGRFGAGR 426



 Score = 26.2 bits (55), Expect = 3.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 57  DPGRYEAGRYNPGRXDNSG 113
           DPG ++ GR+  GR + +G
Sbjct: 413 DPGEFDPGRFGAGREEGAG 431



 Score = 25.4 bits (53), Expect = 6.4
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 9   ALPKTVA-PGRYDPSRYDPGRYE 74
           ALP+    PG +DP R+  GR E
Sbjct: 406 ALPRVYRDPGEFDPGRFGAGREE 428


>02_01_0097 + 712586-713035,714120-715080,715577-715746
          Length = 526

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 30  PGRYDPSRYDPGRYE 74
           P  YDPSR+ PGR E
Sbjct: 395 PNVYDPSRFGPGREE 409


>03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594
          Length = 323

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = +3

Query: 51  RYDPGRYEAG--RYNPGRXDNSGRYDPSS 131
           RY   RY +G  RY P R     RY PSS
Sbjct: 204 RYANDRYPSGGDRYVPDRYGGPDRYQPSS 232


>07_03_1176 + 24567720-24570932
          Length = 1070

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 5   HGFAQNCCTWPLRSIPL 55
           H FAQN  T P++S+PL
Sbjct: 449 HSFAQNNFTGPVKSLPL 465


>09_02_0121 +
           4502628-4502696,4503727-4503829,4504205-4504328,
           4505963-4506306,4506383-4506487,4507907-4508288,
           4509173-4509437,4509936-4510094,4511150-4511201,
           4511266-4511462,4512865-4513350,4513797-4514093
          Length = 860

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 30  PGRYDPSRYDPGRYEAGRYNPGRXDNSGRYDPS 128
           PG+Y  + Y PG     + + G     G YD S
Sbjct: 693 PGKYPTNTYKPGANNGTQTHVGNHGAYGTYDSS 725


>07_03_1116 -
           24084162-24084201,24084481-24084570,24084640-24085220,
           24085653-24085822,24086006-24087074
          Length = 649

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 3   STALPKTVAPGRYDPSRYDPGRYEAGRYNPGRXDNSGRYDPSSD 134
           S + P    PG   P+ Y+  +++     PG    +G Y   +D
Sbjct: 542 SASKPYQYTPGSVAPASYNSNQFKVAYGGPGAPPTAGGYGSYND 585


>06_01_0026 +
           265755-265968,267319-267468,267694-267738,267786-268460,
           268779-268843,268854-269073,269163-269438,269547-269663,
           269776-269853,269930-270184,270235-270323,270403-270816
          Length = 865

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -2

Query: 120 RSDLSCRSVPGCNDRLHNGQGRSGMDRNGQVQQ 22
           ++ L+C   PGC   +    GR+ +++  QVQ+
Sbjct: 392 KTSLTCLLSPGCGFNIFRIFGRTEVNQEAQVQE 424


>04_04_1500 +
           34010819-34011016,34013267-34013308,34014195-34014204,
           34014526-34014586,34014621-34014678,34015266-34015412,
           34015643-34016205,34018942-34019728
          Length = 621

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -2

Query: 129 CWGRSDLSCRSVPGCNDRLHNGQGRSGMDRNGQVQQ 22
           CW   + S  ++P   +    G G    D NG V +
Sbjct: 290 CWLEEETSAGALPAAGEGEDGGNGNGDGDGNGAVNE 325


>10_08_0338 + 16916429-16916650,16916728-16917900
          Length = 464

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = +3

Query: 9   ALPKTVAPGRYDPSRYDPGRYEAGRYNPGRXDNSGRYDPSSD 134
           ALP+   PG     R   G     + N G   NSG YD   D
Sbjct: 203 ALPREANPGSGSGGRSMGGGGGGYQSNNGPNSNSGGYDSRGD 244


>09_06_0322 - 22329897-22330078,22330569-22331928
          Length = 513

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -2

Query: 105 CRSVPGCNDRLHNGQGRSGMDRNGQVQQFWAK 10
           C   P   +RLH G     +D NG V  F AK
Sbjct: 371 CHPTPTL-ERLHIGHPLLSLDNNGDVVYFMAK 401


>02_02_0687 + 12969381-12969848,12969961-12970992
          Length = 499

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 3   STALPKTVAPGRY-DPSRYDPGRYEAGR 83
           S  +  T+ P  Y DP  +DP R+ AGR
Sbjct: 394 SPLVVNTLLPNIYKDPHVFDPDRFAAGR 421


>01_03_0055 + 12074512-12076155
          Length = 547

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 93  PGCNDRLHNGQGRSGMDRNGQVQQFWAKPWT 1
           PG +D + NG G+ G+ +  Q       PWT
Sbjct: 72  PGHDDGMGNGAGKGGVVQQQQQPGSVGCPWT 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,880,207
Number of Sequences: 37544
Number of extensions: 56048
Number of successful extensions: 228
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 14,793,348
effective HSP length: 26
effective length of database: 13,817,204
effective search space used: 262526876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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