Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D17
         (139 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  29   3.5  
BC113361-1|AAI13362.1|  501|Homo sapiens raftlin family member 2...    29   3.5  
BC111069-1|AAI11070.1|  501|Homo sapiens raftlin family member 2...    29   3.5  
BC093966-1|AAH93966.1|  501|Homo sapiens raftlin family member 2...    29   3.5  
AK055136-1|BAB70861.1|  501|Homo sapiens protein ( Homo sapiens ...    29   3.5  
AJ277892-3|CAD12457.1| 5604|Homo sapiens Novex-3 Titin Isoform p...    29   3.5  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                29   3.5  
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    29   3.5  
AC023270-1|AAX88844.1| 5604|Homo sapiens unknown protein.              29   3.5  
AC020550-1|AAX93148.1|  454|Homo sapiens unknown protein.              29   3.5  

>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 15   PKTVAPGRYDPSRYDPGRYEAGRYNPGR 98
            P  ++P R  P+R  P R    R +PGR
Sbjct: 1368 PIRMSPARMSPARMSPARMSPARMSPGR 1395


>BC113361-1|AAI13362.1|  501|Homo sapiens raftlin family member 2
           protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 138 NCHCWGRSDLSCRSVP-GCNDRLHNGQGRSGMDRNG 34
           NC  W    LS +S   G  + LH+  G+  M++NG
Sbjct: 193 NCRSWNEGTLSGQSSESGIEEELHHESGQYQMEQNG 228


>BC111069-1|AAI11070.1|  501|Homo sapiens raftlin family member 2
           protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 138 NCHCWGRSDLSCRSVP-GCNDRLHNGQGRSGMDRNG 34
           NC  W    LS +S   G  + LH+  G+  M++NG
Sbjct: 193 NCRSWNEGTLSGQSSESGIEEELHHESGQYQMEQNG 228


>BC093966-1|AAH93966.1|  501|Homo sapiens raftlin family member 2
           protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 138 NCHCWGRSDLSCRSVP-GCNDRLHNGQGRSGMDRNG 34
           NC  W    LS +S   G  + LH+  G+  M++NG
Sbjct: 193 NCRSWNEGTLSGQSSESGIEEELHHESGQYQMEQNG 228


>AK055136-1|BAB70861.1|  501|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30574 fis, clone BRAWH2006493. ).
          Length = 501

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 138 NCHCWGRSDLSCRSVP-GCNDRLHNGQGRSGMDRNG 34
           NC  W    LS +S   G  + LH+  G+  M++NG
Sbjct: 193 NCRSWNEGTLSGQSSESGIEEELHHESGQYQMEQNG 228


>AJ277892-3|CAD12457.1| 5604|Homo sapiens Novex-3 Titin Isoform
            protein.
          Length = 5604

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 15   PKTVAPGRYDPSRYDPGRYEAGRYNPGR 98
            P  ++P R  P+R  P R    R +PGR
Sbjct: 1414 PIRMSPARMSPARMSPARMSPARMSPGR 1441


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 15   PKTVAPGRYDPSRYDPGRYEAGRYNPGR 98
            P  ++P R  P+R  P R    R +PGR
Sbjct: 1414 PIRMSPARMSPARMSPARMSPARMSPGR 1441


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 15   PKTVAPGRYDPSRYDPGRYEAGRYNPGR 98
            P  ++P R  P+R  P R    R +PGR
Sbjct: 1368 PIRMSPARMSPARMSPARMSPARMSPGR 1395


>AC023270-1|AAX88844.1| 5604|Homo sapiens unknown protein.
          Length = 5604

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 15   PKTVAPGRYDPSRYDPGRYEAGRYNPGR 98
            P  ++P R  P+R  P R    R +PGR
Sbjct: 1414 PIRMSPARMSPARMSPARMSPARMSPGR 1441


>AC020550-1|AAX93148.1|  454|Homo sapiens unknown protein.
          Length = 454

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 138 NCHCWGRSDLSCRSVP-GCNDRLHNGQGRSGMDRNG 34
           NC  W    LS +S   G  + LH+  G+  M++NG
Sbjct: 146 NCRSWNEGTLSGQSSESGIEEELHHESGQYQMEQNG 181


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,714,668
Number of Sequences: 237096
Number of extensions: 325467
Number of successful extensions: 907
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 76,859,062
effective HSP length: 26
effective length of database: 70,694,566
effective search space used: 1343196754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)