Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D16
(496 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0178 + 1386981-1387505 41 5e-04
06_01_0145 + 1092764-1093351 40 0.001
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 39 0.002
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 36 0.024
06_02_0120 + 12055076-12055175,12055322-12055725 34 0.072
12_01_0077 - 637470-638114 31 0.51
06_03_0790 - 24636805-24637770 31 0.51
06_01_0125 + 970746-970967,971126-971226,971897-972026,972108-97... 29 2.1
03_05_0625 - 26225201-26225879,26226706-26227553 29 2.1
05_04_0186 + 18866762-18866949,18867207-18867345,18868068-188682... 29 2.7
02_05_1309 + 35627549-35627679,35628377-35629361 29 2.7
01_01_1143 - 9064210-9065682 29 2.7
07_03_0744 + 21121757-21122202,21122316-21122737,21122992-211231... 28 3.6
03_06_0678 - 35480711-35484658 28 3.6
11_04_0250 + 15335457-15335882 28 4.7
09_04_0688 + 19475847-19477034,19477133-19477384,19477778-194778... 28 4.7
07_03_1788 + 29523216-29524867,29525048-29525075 27 6.3
07_03_1136 + 24218601-24218734,24218769-24219906 27 6.3
04_03_0186 - 12427609-12427665,12429230-12429314,12431176-12431618 27 6.3
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 27 6.3
11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774,601... 27 8.3
04_04_0397 - 24921892-24922947,24923486-24923734,24923807-249241... 27 8.3
>06_01_0178 + 1386981-1387505
Length = 174
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/52 (44%), Positives = 25/52 (48%)
Frame = +2
Query: 320 GQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKG 475
G++ GEPG PG GR G G G GA G G G G G G G KG
Sbjct: 7 GELPVDGEPGQPGGRGRGGRGGRGGRGGASGGGGGGGGGGGGGGGGGAGGKG 58
>06_01_0145 + 1092764-1093351
Length = 195
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +2
Query: 320 GQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGE 478
G+ G GEPG PG GR G G G GA G G + G G +G G +G+
Sbjct: 16 GEPGQPGEPGQPGGRGRGGRGGRGGRGGAGGRLGVR--HGRRGRRGGGGARGQ 66
Score = 31.1 bits (67), Expect = 0.51
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 320 GQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFK-GDNGDKG 475
G+ +PG PG PG G G G G G G G G G + G G +G
Sbjct: 7 GEFPVDDQPGEPGQPGEPGQPGGRGRGGRGGRGGRGGAGGRLGVRHGRRGRRG 59
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKG 475
GF G G G G G G GRD G G +G EGP G+ G G GF G G
Sbjct: 1029 GFGGRDGPGGFGGRDGPGGFGGRD---GPGGFIGREGPGGFGGREGPVGFGGQESPGG 1083
Score = 35.9 bits (79), Expect = 0.018
Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +2
Query: 305 FTGLVGQIGPQG--EPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGE 478
F VG G G G G GRDG G G G G G GP G G +G G G
Sbjct: 1010 FESAVGIPGSYGGIRDGPGGFGGRDGPGGFGGRDGPGGFGGRDGPGGFIGREGPGGFGGR 1069
Query: 479 PAHIG 493
+G
Sbjct: 1070 EGPVG 1074
Score = 34.7 bits (76), Expect = 0.041
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = +2
Query: 320 GQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGE 478
G G G G G GRDG G G G G G +GP G G +G G G+
Sbjct: 1026 GPGGFGGRDGPGGFGGRDGPGGFGGRDGPGGFIGREGPGGFGGREGPVGFGGQ 1078
Score = 34.7 bits (76), Expect = 0.041
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +2
Query: 311 GLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNG 466
G G+ GP G G G G G G G G E P G+ G +G F+G G
Sbjct: 1047 GFGGRDGPGGFIGREGPGGFGGREGPVGFGGQESPGGFGGRKGPGAFEGREG 1098
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 35.5 bits (78), Expect = 0.024
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +2
Query: 44 AVYDPITKQRTAAVDRNCTAT---GCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 205
A + P+ + RT V++ T G P C R FPG G T +PGH G
Sbjct: 24 AAFVPVAESRTTPVEKTTTTQAEDGVKKPDCVPAFDPRSFPGHGGTTTPTPIPGHHG 80
>06_02_0120 + 12055076-12055175,12055322-12055725
Length = 167
Score = 33.9 bits (74), Expect = 0.072
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = +2
Query: 305 FTGLVGQIGPQGEPGMPGI-----PGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGD 469
+ G GQ G G G PG PG G G G G GY G G PG+ G +G
Sbjct: 70 YGGGYGQPGYGGGYGQPGYGSGYGPGYGGGGSGPGYGGGYGSPGYGGGYGSPGYGGGSGY 129
Query: 470 KG 475
G
Sbjct: 130 GG 131
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKG 475
G G G G G PG G G G G G G GY G G G G G G
Sbjct: 107 GGYGSPGYGGGYGSPGYGGGSGYGGGYGGGYGGGYGGGSGYGGGGGYGGGSGGGGQHG 164
>12_01_0077 - 637470-638114
Length = 214
Score = 31.1 bits (67), Expect = 0.51
Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +2
Query: 296 AQGFTGLVGQIGPQGEPGMPGI--PGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNG 466
A T VG P PGMPGI PG C+ G+E P G G G G D+G
Sbjct: 74 ASDVTQSVGDEPPPPLPGMPGIKVPGGVVCDDLPHGGGSEPPAG--GDSGRAGTDDDDG 130
>06_03_0790 - 24636805-24637770
Length = 321
Score = 31.1 bits (67), Expect = 0.51
Identities = 21/55 (38%), Positives = 23/55 (41%)
Frame = +2
Query: 329 GPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGEPAHIG 493
G G G G GR G G G G G G G G G GD+GD G+ G
Sbjct: 108 GGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGNGGDDGDNGDDGEDG 162
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = +2
Query: 329 GPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRG------LPGFKGDNGDKG 475
G G G G G DG +G DG+ G G KG RG + G NGD+G
Sbjct: 144 GGGGNGGDDGDNGDDGEDG-DGDAGGRGGKGRGRGRGRGMGSGIGRGNGQNGDRG 197
>06_01_0125 +
970746-970967,971126-971226,971897-972026,972108-972333,
972400-972502,972519-972594,972710-973333
Length = 493
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 383 GTDGEVGAEG-PKGYQGPRGLPGFKGDNGDKG 475
G G +G EG P G GP G+ G GD G G
Sbjct: 6 GGPGGIGGEGGPGGDGGPHGIGGSGGDGGCGG 37
>03_05_0625 - 26225201-26225879,26226706-26227553
Length = 508
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Frame = +2
Query: 5 PPSRSPSITGLNFAVYDPITKQRTAAVD-----RNCTATGCCVP 121
PP S +F YDP R + R C+A CC+P
Sbjct: 152 PPRMGASTFPADFLAYDPAASSRYEVLSVTCFRRRCSACSCCLP 195
>05_04_0186 +
18866762-18866949,18867207-18867345,18868068-18868295,
18869023-18869081,18869411-18869482,18870239-18870287,
18870431-18870661,18872018-18872187,18872274-18872478,
18872826-18873494,18873592-18873819,18873901-18874689
Length = 1008
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 127 TFWHTTTSRCAIAIHSSSALFRNGVVYSKI*ASNGRR 17
TFW TT +CA A H +L G+ YS NG +
Sbjct: 98 TFWFFTTFQCAPAGHQHVSLNFRGINYSAEVYLNGHK 134
>02_05_1309 + 35627549-35627679,35628377-35629361
Length = 371
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 356 GIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKG 475
G G + G G VGAEG +G G G G GD G
Sbjct: 157 GGAGEEEVVGVGGGVGAEGGRGGGGEGGRGGAGAGGGDDG 196
>01_01_1143 - 9064210-9065682
Length = 490
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 311 GLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKG 421
G +G G PGMPG G G G G G+ P G
Sbjct: 446 GASAGLGSSGLPGMPGAGGYLGGYGGGGGYGSTPPGG 482
>07_03_0744 +
21121757-21122202,21122316-21122737,21122992-21123117,
21123198-21123319,21123413-21123623,21123955-21124192,
21124284-21124431,21124547-21124879
Length = 681
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 86 DRNCTATGCCVPKCFAEKGNRGFPGSPGPT 175
D N +A G CV FA+ G R PG G T
Sbjct: 89 DVNASACGACVAAAFAD-GKRSCPGIKGAT 117
>03_06_0678 - 35480711-35484658
Length = 1315
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 371 LDLEYQAYQAHPEDLSAL--LIQ*NLEHQACLCHL 273
LDL Y +A PED+S L L NL CLC L
Sbjct: 601 LDLSYSKIEALPEDISILYHLQTLNLSICDCLCQL 635
>11_04_0250 + 15335457-15335882
Length = 141
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 56 PITKQRTAAVDRNCTATGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEGA 208
P+ K++T + + GC V + + +RG P + G G+R G GA
Sbjct: 2 PVAKKQTLVAEADVQRRGCAVLRISDRRQSRGGPTAGG--GVRRAGGWGGA 50
>09_04_0688 +
19475847-19477034,19477133-19477384,19477778-19477858,
19477907-19478072,19479009-19479445,19479781-19479837
Length = 726
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 371 DGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKG 475
D NG DG A GP G G K D GD G
Sbjct: 63 DSLNGFDGNFRAS--HAAYGPAGFQGLKPDTGDVG 95
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +2
Query: 362 PGRDGCNGTDGEVG------AEGPKGYQGPRGLPGFKGDNGDKGEPAHI 490
P + G +D EV ++G +G PRG P + + G PAH+
Sbjct: 254 PRKKGATDSDSEVDFDRKRVSKGGRGSGAPRGRPRGRPRKNNAGRPAHL 302
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 311 GLVGQIG-PQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNG 466
G G +G P G G G PGR G G P G G GL G G+ G
Sbjct: 164 GRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGG 216
>04_03_0186 - 12427609-12427665,12429230-12429314,12431176-12431618
Length = 194
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 365 GRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGD-KGEPA 484
G DG + EVG GP P + G +GD GD +G PA
Sbjct: 96 GWDGGVEAEDEVGVGGPGREAVPVVMGGAEGDGGDQEGLPA 136
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +2
Query: 347 GMPGIPGRDGCNGTDG-EVGAE-GPKGYQGPRGLPGFKGDNGDKGEP 481
G G GRD N G E G + G G P+G P + G GD P
Sbjct: 275 GRGGYGGRDQGNNQRGDESGYDAGSYGQVPPQGPPSYGGPGGDYAAP 321
>11_01_0727 -
6010537-6010548,6011029-6011606,6011709-6011774,
6011867-6011964,6013238-6013608
Length = 374
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
Frame = +2
Query: 329 GPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGY----QGPRGL-PGFKGDNGDKGEPAHIG 493
G PG P PG G G P Y QG G+ PG+ G+N PA+ G
Sbjct: 290 GGDFRPGGPSAPGTYGQPPAPGNYAQPHPPTYPGSNQGAPGVNPGYGGNNRQGPGPAYGG 349
>04_04_0397 -
24921892-24922947,24923486-24923734,24923807-24924157,
24924244-24924331,24924466-24924563,24925141-24925362,
24925490-24925585,24926410-24926481,24927156-24927305
Length = 793
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 344 PGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDN 463
PGMPG PG G G G + ++ PR +GD+
Sbjct: 497 PGMPGTPGMPGSRKMPGMPGLDN-DNWEVPRSKSMPRGDS 535
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 329 GPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRG 439
G G PGMPG G G D + E P+ PRG
Sbjct: 498 GMPGTPGMPGSRKMPGMPGLDND-NWEVPRSKSMPRG 533
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,123,678
Number of Sequences: 37544
Number of extensions: 269369
Number of successful extensions: 947
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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