Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D16
(496 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g28480.1 68418.m03462 hypothetical protein 44 4e-05
At2g12100.1 68415.m01300 Ulp1 protease family protein contains P... 44 4e-05
At1g45090.1 68414.m05169 Ulp1 protease family protein similar to... 44 4e-05
At1g44222.1 68414.m05107 hypothetical protein 42 2e-04
At1g76010.1 68414.m08825 expressed protein 38 0.005
At3g02670.1 68416.m00258 proline-rich family protein contains pr... 36 0.020
At2g37410.2 68415.m04588 mitochondrial import inner membrane tra... 34 0.046
At2g37410.1 68415.m04587 mitochondrial import inner membrane tra... 34 0.046
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 33 0.14
At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein... 32 0.18
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 32 0.18
At3g05220.2 68416.m00570 heavy-metal-associated domain-containin... 31 0.32
At3g05220.1 68416.m00569 heavy-metal-associated domain-containin... 31 0.32
At2g33860.1 68415.m04157 auxin-responsive factor (ARF3) / ETTIN ... 31 0.56
At2g04170.1 68415.m00402 meprin and TRAF homology domain-contain... 30 0.74
At2g21060.1 68415.m02500 cold-shock DNA-binding family protein /... 29 1.7
At4g33610.1 68417.m04774 glycine-rich protein 29 2.3
At2g28290.2 68415.m03434 chromatin remodeling protein, putative ... 28 3.0
At2g28290.1 68415.m03433 chromatin remodeling protein, putative ... 28 3.0
At1g25580.1 68414.m03176 no apical meristem (NAM) family protein... 28 4.0
At1g08420.1 68414.m00931 kelch repeat-containing protein / serin... 28 4.0
At1g73350.1 68414.m08490 expressed protein 27 5.3
At4g25630.1 68417.m03691 fibrillarin 2 (FIB2) identical to fibri... 27 6.9
At1g55990.1 68414.m06423 glycine-rich protein predicted proteins... 27 6.9
At5g09640.1 68418.m01115 sinapoylglucose:choline sinapoyltransfe... 27 9.2
At2g32840.2 68415.m04021 proline-rich family protein Common fam... 27 9.2
At2g32840.1 68415.m04020 proline-rich family protein Common fam... 27 9.2
At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal hydrolase-r... 27 9.2
At1g15830.1 68414.m01900 expressed protein 27 9.2
>At5g28480.1 68418.m03462 hypothetical protein
Length = 1230
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/53 (45%), Positives = 25/53 (47%)
Frame = +2
Query: 320 GQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGE 478
G G GE G G G G +G DGE G G G GP G G G NG GE
Sbjct: 420 GPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGE 472
Score = 40.7 bits (91), Expect = 5e-04
Identities = 24/64 (37%), Positives = 29/64 (45%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGEP 481
G +G G+ GP G G G G DG G G G GP G G G G G+ GD+
Sbjct: 420 GPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEAFD 479
Query: 482 AHIG 493
+ G
Sbjct: 480 KYAG 483
Score = 35.9 bits (79), Expect = 0.015
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGD 460
G G G G GE G G G G NG DGE G G G G + G+
Sbjct: 432 GGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEAFDKYAGE 484
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 12/60 (20%)
Frame = +2
Query: 335 QGEPGMPGIPGRDGC------------NGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGE 478
Q P G G+DGC + DGE G G G GP G G G +G GE
Sbjct: 386 QVRPSATGERGKDGCQILLKTKKRKISHSDDGEGGPSGGDGEGGPSGGDGEGGPSGGDGE 445
>At2g12100.1 68415.m01300 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28270, At2g05450,
At1g45090, At2g16180, At2g06750
Length = 1224
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/53 (45%), Positives = 25/53 (47%)
Frame = +2
Query: 320 GQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGE 478
G G GE G G G G +G DGE G G G GP G G G NG GE
Sbjct: 433 GPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGE 485
Score = 40.7 bits (91), Expect = 5e-04
Identities = 24/64 (37%), Positives = 29/64 (45%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGEP 481
G +G G+ GP G G G G DG G G G GP G G G G G+ GD+
Sbjct: 433 GPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEAFD 492
Query: 482 AHIG 493
+ G
Sbjct: 493 KYAG 496
Score = 35.9 bits (79), Expect = 0.015
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGD 460
G G G G GE G G G G NG DGE G G G G + G+
Sbjct: 445 GGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEAFDKYAGE 497
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 389 DGEVGAEGPKGYQGPRGLPGFKGDNGDKGE 478
DGE G G G GP G G G +G GE
Sbjct: 429 DGEGGPSGGDGEGGPSGGDGEGGPSGGDGE 458
>At1g45090.1 68414.m05169 Ulp1 protease family protein similar to
At5g28270, At2g12100, At2g05450, At2g16180, At2g06750;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1210
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/53 (45%), Positives = 25/53 (47%)
Frame = +2
Query: 320 GQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGE 478
G G GE G G G G +G DGE G G G GP G G G NG GE
Sbjct: 424 GPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGE 476
Score = 40.7 bits (91), Expect = 5e-04
Identities = 24/64 (37%), Positives = 29/64 (45%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGEP 481
G +G G+ GP G G G G DG G G G GP G G G G G+ GD+
Sbjct: 424 GPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEAFD 483
Query: 482 AHIG 493
+ G
Sbjct: 484 KYAG 487
Score = 35.9 bits (79), Expect = 0.015
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGD 460
G G G G GE G G G G NG DGE G G G G + G+
Sbjct: 436 GGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEAFDKYAGE 488
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 389 DGEVGAEGPKGYQGPRGLPGFKGDNGDKGE 478
DGE G G G GP G G G +G GE
Sbjct: 420 DGEGGPSGGDGEGGPSGGDGEGGPSGGDGE 449
>At1g44222.1 68414.m05107 hypothetical protein
Length = 85
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +2
Query: 314 LVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGEP 481
++G++G G G PG+ G G G G VG G G G G+PG G +G G P
Sbjct: 1 MLGRLGRPGMLGSPGMLGILGMFGISGMVGRLGILGRLGMMGIPGMLGSHGMLGNP 56
Score = 35.1 bits (77), Expect = 0.026
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGA 406
G +G+VG++G G GM GIPG G +G G G+
Sbjct: 24 GISGMVGRLGILGRLGMMGIPGMLGSHGMLGNPGS 58
>At1g76010.1 68414.m08825 expressed protein
Length = 350
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +2
Query: 332 PQGEPGMPGIPGRDGCNGTDGEVGAEGPK----GYQGP-RGLPGFKGDNGDKG 475
PQG G G GR G +G G G +GP GY GP +G G+ G + +G
Sbjct: 244 PQGRGGYDGPQGRGGYDGPQGRRGYDGPPQGRGGYDGPSQGRGGYDGPSQGRG 296
>At3g02670.1 68416.m00258 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 217
Score = 35.5 bits (78), Expect = 0.020
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +2
Query: 332 PQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRG---LPGFKGDNG 466
P G PG+PGIPG G G G G P + G +PG G G
Sbjct: 107 PGGNPGIPGIPGIPGLPGIPGSPGFRLPFPFPSSPGGGSIPGIPGSPG 154
Score = 31.1 bits (67), Expect = 0.43
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 332 PQGEPGMPGIPG-RDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNG 466
P G PG+PG PG R G G G G GLPG G G
Sbjct: 85 PGGNPGIPGSPGFRLPFPFPSSPGGNPGIPGIPGIPGLPGIPGSPG 130
Score = 31.1 bits (67), Expect = 0.43
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 140 GNRGFPGSPGPTGIRGLPGHEG 205
GN G PG PG G+ G+PG G
Sbjct: 109 GNPGIPGIPGIPGLPGIPGSPG 130
Score = 29.9 bits (64), Expect = 0.98
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +2
Query: 311 GLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFK 454
G G G G PG+PGIPG G + G G G PGF+
Sbjct: 109 GNPGIPGIPGIPGLPGIPGSPGFRLPFPFPSSPGGGSIPGIPGSPGFR 156
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +2
Query: 332 PQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGEP 481
P G PGIPG G + G G G G+PG G G G P
Sbjct: 82 PSSPGGNPGIPGSPGFRLPFPFPSSPG--GNPGIPGIPGIPGLPGIPGSP 129
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 152 FPGSPGPTGIRGLPGHEG 205
FP SPG I G+PG G
Sbjct: 137 FPSSPGGGSIPGIPGSPG 154
Score = 22.6 bits (46), Expect(2) = 1.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 140 GNRGFPGSPG 169
GN G PGSPG
Sbjct: 87 GNPGIPGSPG 96
>At2g37410.2 68415.m04588 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 34.3 bits (75), Expect = 0.046
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 341 EPGMPGIPGRDGCNGTDGEVGAEGPKGYQG 430
+PGM G+PG G G G G +G G QG
Sbjct: 147 DPGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 33.5 bits (73), Expect = 0.080
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNG 385
G G+ G G QG PGMPG+ G G G
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 311 GLVGQIGPQGEPGMPGIPGRDGCNGTDG 394
G+ G G QG GMPG+PG G G G
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 31.5 bits (68), Expect = 0.32
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 299 QGFTGLVGQIGPQGEPGMPGIPGRDG 376
QG G+ G G G PGM G+PG G
Sbjct: 151 QGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 140 GNRGFPGSPGPTGIRGLPGHEGAE 211
G +G G PG G++G+PG +G +
Sbjct: 155 GMQGMQGMPGMPGMQGMPGMQGMQ 178
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 134 EKGNRGFPGSPGPTGIRGLPGHEG 205
+ G +G PG G G+ G+PG +G
Sbjct: 147 DPGMQGMPGMQGMQGMPGMPGMQG 170
>At2g37410.1 68415.m04587 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 34.3 bits (75), Expect = 0.046
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 341 EPGMPGIPGRDGCNGTDGEVGAEGPKGYQG 430
+PGM G+PG G G G G +G G QG
Sbjct: 147 DPGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 33.5 bits (73), Expect = 0.080
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNG 385
G G+ G G QG PGMPG+ G G G
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 311 GLVGQIGPQGEPGMPGIPGRDGCNGTDG 394
G+ G G QG GMPG+PG G G G
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 31.5 bits (68), Expect = 0.32
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 299 QGFTGLVGQIGPQGEPGMPGIPGRDG 376
QG G+ G G G PGM G+PG G
Sbjct: 151 QGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 140 GNRGFPGSPGPTGIRGLPGHEGAE 211
G +G G PG G++G+PG +G +
Sbjct: 155 GMQGMQGMPGMPGMQGMPGMQGMQ 178
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 134 EKGNRGFPGSPGPTGIRGLPGHEG 205
+ G +G PG G G+ G+PG +G
Sbjct: 147 DPGMQGMPGMQGMQGMPGMPGMQG 170
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 32.7 bits (71), Expect = 0.14
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 338 GEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGEPA 484
G G G GRDG G G G G G +G G G +G + +G P+
Sbjct: 496 GRFGSGGGRGRDGGRGRFGSGGGRGRDGGRGRFGSGGGRGSDRGRGRPS 544
>At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 404
Score = 32.3 bits (70), Expect = 0.18
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEP-GMPGIPGRDGCNGTDGEVGAEGPKGY 424
G+ G G P G P G P +PG +G GA+ P GY
Sbjct: 258 GYGGFGGYGNPAGAPYGNPSVPGAGFGSGPRSSWGAQAPSGY 299
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 32.3 bits (70), Expect = 0.18
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 326 IGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKG 457
I P PG P IP G + GP G+ G G PGF G
Sbjct: 224 INPPRNPGAPVIPRNPNPPVFPGNPRSMGPPGFPGIGGPPGFPG 267
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 305 FTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGP 433
F G +GP G PG+ G PG G G G GY P
Sbjct: 244 FPGNPRSMGPPGFPGIGGPPGFPGTPFGGGGTGPTLGDGYANP 286
>At3g05220.2 68416.m00570 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 478
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +2
Query: 311 GLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPG 448
G +G GP G G G G G G G + GP G GP G G
Sbjct: 325 GPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQG 370
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +2
Query: 329 GPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNG 466
GP G G G G G G G +G GP GP G G G G
Sbjct: 325 GPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQG 370
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 347 GMPGIP-GRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKG 475
G+ G P G G G G +G GP G GP G G G G
Sbjct: 321 GIGGGPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMG 364
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRG 439
G G G +GP G G G G G G +G GP G G +G
Sbjct: 325 GPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQG 370
>At3g05220.1 68416.m00569 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 577
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +2
Query: 311 GLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPG 448
G +G GP G G G G G G G + GP G GP G G
Sbjct: 424 GPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQG 469
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +2
Query: 329 GPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNG 466
GP G G G G G G G +G GP GP G G G G
Sbjct: 424 GPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQG 469
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 347 GMPGIP-GRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKG 475
G+ G P G G G G +G GP G GP G G G G
Sbjct: 420 GIGGGPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMG 463
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRG 439
G G G +GP G G G G G G +G GP G G +G
Sbjct: 424 GPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQG 469
>At2g33860.1 68415.m04157 auxin-responsive factor (ARF3) / ETTIN
protein (ETT) identical to ETTIN GB:AF007788 from
[Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 0.56
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +2
Query: 347 GMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGEPAHIGR 496
G P IP +G TD E + QG PGF D G A GR
Sbjct: 414 GKPDIPVSEGIRATDFEESLRFQRVLQGQEIFPGFINTCSDGGAGARRGR 463
>At2g04170.1 68415.m00402 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to NtN2 [Medicago truncatula] GI:3776084; contains Pfam
profile PF00917: MATH domain
Length = 420
Score = 30.3 bits (65), Expect = 0.74
Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 320 GQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRG-LPGFKGDNG 466
G GP PG PG GR G G G GP + GPRG PG G G
Sbjct: 41 GPGGPGFGPGGPGFGGR-GPRGPG--FGPRGPGPWSGPRGPRPGGGGGPG 87
>At2g21060.1 68415.m02500 cold-shock DNA-binding family protein /
glycine-rich protein (GRP2) identical to Glycine-rich
protein 2b (AtGRP2b) [Arabidopsis thaliana]
SWISS-PROT:Q38896; contains Pfam domains PF00313:
'Cold-shock' DNA-binding domain and PF00098: Zinc
knuckle
Length = 201
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 14/70 (20%)
Frame = +2
Query: 329 GPQGEP------GMPGIPGRDGCNGTDGEVGAEGPKGY---QGPRGLPGFKGDNGDK--- 472
GP G P G GR G G G G G Y G RG G G GD
Sbjct: 80 GPDGAPVQGNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYGGRGSGGRGGGGGDNSCF 139
Query: 473 --GEPAHIGR 496
GEP H+ R
Sbjct: 140 KCGEPGHMAR 149
>At4g33610.1 68417.m04774 glycine-rich protein
Length = 115
Score = 28.7 bits (61), Expect = 2.3
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 314 LVGQIGPQGEPGMP-GIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDKGEP-AH 487
+VG G G G+ G+ GR GC DG + G G G G +G+ G P
Sbjct: 50 VVGNEGKVGIGGIAVGMVGRFGCGKADGIGNGDIAVGIVGRVGKDGCGNVDGNGGSPIVG 109
Query: 488 IGR 496
IGR
Sbjct: 110 IGR 112
>At2g28290.2 68415.m03434 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3529
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +2
Query: 17 SPSITGLNFAVYDPITKQRTAAVDRNCTATGCCVPKCFAEKGNRGFPGSPGPTGIRG 187
S + TGL+F D +R A ++ P G + P SP PT IRG
Sbjct: 1480 SSAATGLDFVSSD----KRLEAASHPTSSLALTSPDLSGPPGFQSLPASPAPTPIRG 1532
>At2g28290.1 68415.m03433 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3574
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +2
Query: 17 SPSITGLNFAVYDPITKQRTAAVDRNCTATGCCVPKCFAEKGNRGFPGSPGPTGIRG 187
S + TGL+F D +R A ++ P G + P SP PT IRG
Sbjct: 1480 SSAATGLDFVSSD----KRLEAASHPTSSLALTSPDLSGPPGFQSLPASPAPTPIRG 1532
>At1g25580.1 68414.m03176 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to putative NAM protein (GP:21554371)
(Arabidopsis thaliana)
Length = 449
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 99 QRLVVVCQNVSQKRVTGDFLAALDPLA*EVSPDMKAPKVR 218
Q+LVV + +++ V+ D AA+ P A V+P + P+ R
Sbjct: 214 QQLVVKRGDKAEQEVSEDIFAAVTPTADPVTPKLATPEPR 253
>At1g08420.1 68414.m00931 kelch repeat-containing protein /
serine/threonine phosphoesterase family protein contains
Pfam profiles: PF00149 calcineurin-like phosphoesterase,
PF01344 kelch motif
Length = 1018
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Frame = +2
Query: 398 VGAEGPKGYQGPR-----GLPGFKGDNGDKGEPAHIG 493
VG EG GY GPR G +G++G G P G
Sbjct: 116 VGDEGTPGYIGPRLVLFGGATALEGNSGGTGTPTSAG 152
>At1g73350.1 68414.m08490 expressed protein
Length = 194
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 335 QGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNGDK 472
Q E MP + + G + DG+ +G P+GL G D+ D+
Sbjct: 148 QKEEAMPVLK-KPGADRNDGKATESNGQGQNAPKGLLGLAYDSSDE 192
>At4g25630.1 68417.m03691 fibrillarin 2 (FIB2) identical to
fibrillarin 2 GI:9965655 from [Arabidopsis thaliana]
Length = 320
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 392 GEVGAEGPKGYQGPRGLPGFKGDNGDKG 475
G G G GY G RG GF G G G
Sbjct: 11 GFSGGRGRGGYSGGRGDGGFSGGRGGGG 38
>At1g55990.1 68414.m06423 glycine-rich protein predicted proteins,
Arabidopsis thaliana
Length = 139
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMP-GIPGRDGCNGTDGEVGAEGPKGYQGPRGLPGFKGDNG 466
G G+V +G +G+ G+ G+ GR GC DG + G G G G+ G
Sbjct: 45 GREGIV--VGNEGKVGIAVGMVGRFGCGKADGIGNGDIAVGIVGKDGCGNVDGNGG 98
>At5g09640.1 68418.m01115 sinapoylglucose:choline
sinapoyltransferase (SNG2) GC donor splice site at exon
11 and 13; TA donor splice site at exon 10; similar to
serine carboxypeptidase I precursor (SP:P37890) [Oryza
sativa]; wound-inducible carboxypeptidase, Lycopersicon
esculentum, EMBL:AF242849; contains Pfam profile
PF00450: Serine carboxypeptidase; identical to cDNA
sinapoylglucose:choline sinapoyltransferase (SNG2)
GI:15418806
Length = 465
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 332 PQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQG 430
P+ +P M + G GC+ G + A GP ++G
Sbjct: 67 PENDPLMIWLTGGPGCSSICGLLFANGPLAFKG 99
>At2g32840.2 68415.m04021 proline-rich family protein Common family
member: At1g04930 [Arabidopsis thaliana]
Length = 291
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 308 TGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRG 439
+ L+ G G G P P R N VG+ P GY PRG
Sbjct: 95 SSLIYPFGSSGR-GFPTRPVRQNSNSVADPVGSPSPGGYT-PRG 136
>At2g32840.1 68415.m04020 proline-rich family protein Common family
member: At1g04930 [Arabidopsis thaliana]
Length = 337
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 308 TGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGPKGYQGPRG 439
+ L+ G G G P P R N VG+ P GY PRG
Sbjct: 95 SSLIYPFGSSGR-GFPTRPVRQNSNSVADPVGSPSPGGYT-PRG 136
>At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1101
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +3
Query: 39 ILLYTTPLRNNALLLWIAIAQRLVVVCQNVSQK 137
I + TP+R + L +W+A+ + + + C ++ K
Sbjct: 492 IFRFPTPIRMHNLDIWVAVLKAVWLTCMTLATK 524
>At1g15830.1 68414.m01900 expressed protein
Length = 483
Score = 26.6 bits (56), Expect = 9.2
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +2
Query: 302 GFTGLVGQIGPQGEPGMPGIPGRDGCNGTDGEVGAEGP-KGYQGPRGLPGF-KGDNGDKG 475
G G G GEP +PG P + G GA P +G G +PG G G
Sbjct: 88 GMGGTSATRGGGGEPVIPGAPPPNRGGGETVIPGAPPPIRGGGGEPAIPGAPPPKRGGGG 147
Query: 476 EP 481
EP
Sbjct: 148 EP 149
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,309,386
Number of Sequences: 28952
Number of extensions: 203139
Number of successful extensions: 794
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 868578304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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