Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D15
(538 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0011 - 7337618-7338496,7338596-7338991 67 1e-11
11_02_0012 - 7346282-7347136,7347234-7347593 66 2e-11
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 58 4e-09
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 52 4e-07
11_01_0750 - 6315126-6315896,6316371-6316784 51 7e-07
11_01_0767 + 6438648-6438809,6439146-6440000 47 1e-05
05_06_0044 - 25150322-25151260 46 1e-05
11_01_0771 + 6453130-6454488 46 3e-05
04_04_0620 + 26656072-26656417,26656585-26657396 40 0.001
04_04_0619 + 26652923-26653267,26653440-26654273 40 0.001
01_06_0824 - 32243495-32244319,32244449-32244859 40 0.001
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 66.9 bits (156), Expect = 1e-11
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Frame = +2
Query: 26 YGDDN-RYSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKHTADEVI--VQIPRFKIV 196
YG +N SM +FLP + +++D + SS F + T + +++PRFK V
Sbjct: 255 YGGENVGLSMYIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFK-V 313
Query: 197 SNINNLKELLTDMGLKTMFDSGRAKFSGISE------CQIHVSNLIQKAHIEVTEEGTXX 358
S + + +L MG+ FD+G A SG++E + V + +A +EV EEGT
Sbjct: 314 SFYSQINGVLQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEEGTEA 373
Query: 359 XXXXXXXXXXKML--PDQFTANKPFLFMIVDRRMELALFTGAYSKPT 493
+ P+ F A+ PF F +V+ LF G PT
Sbjct: 374 AASTACTIRLLSMSYPEDFVADHPFAFFVVEETSGAVLFAGHVLDPT 420
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 66.1 bits (154), Expect = 2e-11
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Frame = +2
Query: 26 YGDDNRYSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAK-HTADEVIVQI-----PRF 187
YG++ SM +FLP + +++D + + + F + H +++ PRF
Sbjct: 236 YGENVGLSMYIFLPDARDGLPALVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRF 295
Query: 188 KIVSNINNLKELLTDMGLKTMFDSGRAKFSGISECQ-IHVSNLIQKAHIEVTEEGTXXXX 364
K VS + + E+L MG+ FD G+ SG+ + + + V ++ +A +EV EEGT
Sbjct: 296 K-VSFYSEMNEVLKGMGIGAAFDVGKVDLSGMIDGELVVVEKVMHRAVVEVNEEGTEAAA 354
Query: 365 XXXXXXXXKML----PDQFTANKPFLFMIVDRRMELALFTGAYSKPT 493
L P F A+ PF F +V+ + + LF G PT
Sbjct: 355 ATACTMKFLCLTLTSPVDFVADHPFAFFVVEEKSDAVLFAGHVLDPT 401
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 58.0 bits (134), Expect = 4e-09
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 12/168 (7%)
Frame = +2
Query: 8 RVLELPY---GDDNRYSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKHTADEVIV-- 172
+VL+LPY GD ++SM + LP + S+ + L P KH +
Sbjct: 298 KVLKLPYQQGGDKRQFSMYILLPEAQDGLWSLAEKLNSEP-----EFLEKHIPTRQVTVG 352
Query: 173 --QIPRFKIVSNINNLKELLTDMGLKTMFDSGRAKFSGISECQ---IHVSNLIQKAHIEV 337
++P+FKI +LL +GL F S + + + VS++ K+ +EV
Sbjct: 353 QFKLPKFKISFGFE-ASDLLKSLGLHLPFSSEADLTEMVDSPEGKNLFVSSVFHKSFVEV 411
Query: 338 TEEGTXXXXXXXXXXXXKMLP--DQFTANKPFLFMIVDRRMELALFTG 475
EEGT + P + F A+ PFLF+I + + LF G
Sbjct: 412 NEEGTEAAAATAAVITLRSAPIAEDFVADHPFLFLIQEDMTGVVLFVG 459
Score = 48.4 bits (110), Expect = 4e-06
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 9/170 (5%)
Frame = +2
Query: 8 RVLELPY---GDDNRYSMLLFLPYTSTTVSSVIDNLKRVP--LSSIFTLFAKHTADEVIV 172
+VL+LPY GD ++SM + LP + S+ + L P + + + H
Sbjct: 550 KVLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFMENHIPMRPVHVGQ---F 606
Query: 173 QIPRFKIVSNINNLKELLTDMGLKTMFDSGRAKFSGISEC---QIHVSNLIQKAHIEVTE 343
++P+FKI LL +GL +F S + + VS++ K+ IEV E
Sbjct: 607 KLPKFKISFGFG-ASGLLKGLGLPLLFGSEVDLIEMVDSPGAQNLFVSSVFHKSFIEVNE 665
Query: 344 EGT-XXXXXXXXXXXXKMLPDQFTANKPFLFMIVDRRMELALFTGAYSKP 490
EGT + F A+ PF+F+I + + LF G P
Sbjct: 666 EGTEATAAVMVSMEHSRPRRLNFVADHPFMFLIREDVTGVILFIGHVVNP 715
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 51.6 bits (118), Expect = 4e-07
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
Frame = +2
Query: 8 RVLELPY--GDDNR-YSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKHTADEVIVQI 178
+VL+LPY G D R +SM + LP + S+ L P + ++
Sbjct: 90 KVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEP-EFLEKRIPTRQVTVGKFKL 148
Query: 179 PRFKIVSNINNLKELLTDMGLKTMFDSGRAKFSGI----SECQIHVSNLIQKAHIEVTEE 346
P+FKI +LL +GL+ F S +A +G+ + VS+L K+ ++V EE
Sbjct: 149 PKFKISFGFE-ASDLLKILGLQLPFSS-KADLTGMVGSPERHNLFVSSLFHKSFVQVDEE 206
Query: 347 GTXXXXXXXXXXXXKMLPD--QFTANKPFLFMIVDRRMELALFTGAYSKP 490
GT + P F A+ PFLF+I + + LF G P
Sbjct: 207 GTEAAAASAAVVSFRSAPVTVDFVADHPFLFLIREDMTGVVLFIGHVVNP 256
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 50.8 bits (116), Expect = 7e-07
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 12/174 (6%)
Frame = +2
Query: 8 RVLELPYG---DDNRYSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKHTADE---VI 169
+V++LPY ++ ++SM +FLP + + + P+ +H E V
Sbjct: 227 KVIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKIFSEPM-----FLEQHLPTEKCHVG 281
Query: 170 VQIPRFKIVSNINNLKELLTDMGLKTMFDSGRAKFSGI-----SECQIHVSNLIQKAHIE 334
+ +P FKI I+ +K+ L DMGL+ F A+FS + S + +S+++ KA +E
Sbjct: 282 ISVPNFKISFQID-VKDFLKDMGLELPF-LREAEFSDMIKEDDSSGPLFLSDVLHKAVLE 339
Query: 335 VTEEGTXXXXXXXXXXXXKMLPDQ-FTANKPFLFMIVDRRMELALFTGAYSKPT 493
V ++G K LP Q F A+ PF FMI + +F G P+
Sbjct: 340 VDQKGIEETSVSMGLG--KPLPAQHFKADHPFFFMIREEVSGTVIFMGHVLDPS 391
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 46.8 bits (106), Expect = 1e-05
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Frame = +2
Query: 44 YSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKHTADEVIVQIPRFKIVSNINNLKEL 223
++ML+FLP + ++D + P + ++P+FK+ + ++
Sbjct: 169 FAMLVFLPDDRDGLPGLLDRITASP-EFVDEHLPPGCVPVGRFRVPKFKLAFCHYGIADV 227
Query: 224 LTDMGLKTMFDSGRAKFSGIS------ECQIHVSNLIQKAHIEVTEEGTXXXXXXXXXXX 385
L +GL+ FD A+ SGI+ + + VS++I K +EV EEG+
Sbjct: 228 LRGLGLRLPFDMFAAEMSGIAVEGDGEDAAMFVSSVIHKVVVEVNEEGSEAAAYTEESDD 287
Query: 386 X---KMLPDQFT---------ANKPFLFMIVDRRMELALFTGAYSKPT 493
+ D +T A+ PF F IV+ R + +F G P+
Sbjct: 288 DLGCSLYDDDYTPPPKLVDFVADHPFAFFIVEERSQAIVFAGHVLDPS 335
>05_06_0044 - 25150322-25151260
Length = 312
Score = 46.4 bits (105), Expect = 1e-05
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 9/163 (5%)
Frame = +2
Query: 29 GDDNRYSMLLFLPYTSTTVSSVIDNLKRVPLSSIF-TLFAKHTADEVIVQIPRFKIVSNI 205
G D ++M ++LP + + L P + + T+ ++IP+F++ +
Sbjct: 148 GGDKMFAMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPVAVGELKIPKFEVSLKV 207
Query: 206 NNLKELLTDMGLKTMF-DSGRAKFSGI---SECQIHVSNLIQKAHIEVTEEGTXXXXXXX 373
LL + GL F + FSG+ VS+L+ + + V EEGT
Sbjct: 208 E-ASRLLREFGLDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVNVNEEGTVAAAGTV 266
Query: 374 XXXXXKMLPDQ----FTANKPFLFMIVDRRMELALFTGAYSKP 490
+PD F A+ PFLF IV+ L +F G P
Sbjct: 267 GEIMGFAMPDDQIVDFVADHPFLFFIVEEVSGLVVFAGQVVNP 309
>11_01_0771 + 6453130-6454488
Length = 452
Score = 45.6 bits (103), Expect = 3e-05
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 8/163 (4%)
Frame = +2
Query: 29 GDDNRYSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKHTADEVIVQIPRFKIVSNIN 208
G+ RY+M +FLP + +++ + P + A ++P+FK VS
Sbjct: 289 GEFTRYAMAIFLPDARDGLRGLVERMASRPGFLHEHMPAAWPVPVGEFRVPKFK-VSCGG 347
Query: 209 NLKELLTDMGLKTMFDSGRAKFSGISECQ-----IHVSNLIQKAHIEVTEEGTXXXXXXX 373
++ L +GL+ F A S + E + V ++ KA IEV EEGT
Sbjct: 348 SVVGALEQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATM 407
Query: 374 XXXXXKMLPD---QFTANKPFLFMIVDRRMELALFTGAYSKPT 493
+P F A PF + IV+ +F G P+
Sbjct: 408 TRMLPSGVPPPPVDFVAEHPFAYFIVEEMSSAVVFAGHIVDPS 450
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 13/120 (10%)
Frame = +2
Query: 173 QIPRFKIVSNINNLKELLTDMGLKTMFDSGRAKFSGIS----ECQIHVSNLIQKAHIEVT 340
++P+FK S ++ L +GL FD A S ++ ++VS + QK +EV
Sbjct: 263 KVPKFKFSSQLD-AGGALAQLGLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQKCAVEVD 321
Query: 341 EEGTXXXXXXXXXXX---------XKMLPDQFTANKPFLFMIVDRRMELALFTGAYSKPT 493
EEGT + P F A PF+F IV+ + LF G P+
Sbjct: 322 EEGTTAVEAMYSPSSPGYSPGYQPPRPPPMSFVAEHPFMFAIVEYKKAQVLFLGHVMDPS 381
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 39.9 bits (89), Expect = 0.001
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 14/164 (8%)
Frame = +2
Query: 44 YSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKHTADEVIVQIPRFKIVSNINNLKEL 223
+ ML+FLP + ++ P + + + +P+FK S ++ +
Sbjct: 228 FCMLVFLPIKRDGLRHLLRMAVTEP-DFVMRCVPRSEQEVSPCMVPKFKFSSELD-ARGA 285
Query: 224 LTDMGLKTMFDSGRAKFSGISEC------QIHVSNLIQKAHIEVTEEGTXXXXXX----- 370
L +GL FD A S ++ +++VS + QK +EV EEGT
Sbjct: 286 LAKLGLGAPFDPLAADLSRMAVSVNTPPERLYVSAMRQKCAVEVDEEGTTAVEATYSCCS 345
Query: 371 ---XXXXXXKMLPDQFTANKPFLFMIVDRRMELALFTGAYSKPT 493
K P F A PF+F IV+ LF G P+
Sbjct: 346 PTYSGPESPKPRPMSFVAEHPFMFAIVEYEKAQVLFLGHVMDPS 389
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 39.9 bits (89), Expect = 0.001
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 22/184 (11%)
Frame = +2
Query: 8 RVLELPYGDDNR---------YSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKHTAD 160
+VL LPY R +SM ++LP + ++ L P + I + A
Sbjct: 226 KVLRLPYARGGRGRGRDTGRLFSMYIYLPDERHGLPDMLRKLCSDPAALIESSAALTEKV 285
Query: 161 EV-IVQIPRFKIVSNINNLKELLTDMGLKTMFDSGRAKFSGISEC-----QIHVSNLIQK 322
V +PRF + S N E L +GL+ F+ A S + E +I VS + +
Sbjct: 286 PVGAFMVPRFTL-SYKTNAAETLRQLGLRLPFEYPGADLSEMVESSPEAEKIVVSAVYHE 344
Query: 323 AHIEVTEEGTXXXXXXXXXXXXKMLPDQ-------FTANKPFLFMIVDRRMELALFTGAY 481
+ +EV EEGT F A+ PF+F+I + + +F G
Sbjct: 345 SFVEVNEEGTEAAAATAVVMTLGCAAPSAPVHVVDFVADHPFMFLIKEDLTGVVVFAGQV 404
Query: 482 SKPT 493
+ P+
Sbjct: 405 TNPS 408
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,168,247
Number of Sequences: 37544
Number of extensions: 214804
Number of successful extensions: 378
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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