Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D14
(450 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1655 + 38940790-38940864,38941245-38942057,38942149-389422... 30 0.75
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 29 1.7
04_01_0121 + 1253201-1253584 29 1.7
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 29 2.3
04_01_0113 + 1188285-1188420,1189245-1189795 27 5.3
11_03_0212 - 11761856-11762037,11762302-11762398,11763571-117645... 27 7.0
09_06_0059 - 20584196-20584288,20584389-20585055,20585411-205857... 27 7.0
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 27 7.0
07_03_1115 - 24076506-24076677,24077169-24077266,24077622-240777... 27 7.0
03_06_0726 - 35761959-35762063,35762232-35762336,35762543-357626... 27 7.0
02_05_0044 - 25375239-25376233,25377233-25377364,25377586-25378504 27 7.0
07_03_1391 + 26234647-26235026,26235112-26235226,26235345-262354... 27 9.2
06_03_0189 - 17697779-17698939 27 9.2
04_04_0042 + 22328464-22329858 27 9.2
02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072 27 9.2
01_05_0128 + 18413029-18413318,18413946-18414139,18414447-18414553 27 9.2
>01_06_1655 +
38940790-38940864,38941245-38942057,38942149-38942268,
38942883-38943566
Length = 563
Score = 30.3 bits (65), Expect = 0.75
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 236 FKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAP 397
++I P T P S P+ P V+ + R D D D V +P +P
Sbjct: 101 YQITPAKPATVTAPAAAASLPAPPPPVSARERQRRRDVDDDKPAIVLPLPPPSP 154
>04_04_0962 +
29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 188 AQANANDIDLEEINSIFKIPNQAPTTTK--KPTM 283
++A AN I +E I K+P++APT T+ KP M
Sbjct: 892 SRAEANMISVERILQYTKLPSEAPTITEGSKPPM 925
>04_01_0121 + 1253201-1253584
Length = 127
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 TTTKKPTMTVSAPS-AVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIP 424
TT K+ ++ PS A+P + T R T+ D +N+V+K Q P V P
Sbjct: 33 TTVKESIADLNLPSIAIPNLRTFQAMTRSVTNVDQVNAVYKAFLQPPTGVEMAVDP 88
>12_02_0228 + 15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 242 IPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDIN--SVFKIPTQAPGTVNPV 415
IPN +PTT T + + + T NG + D +P + S F +P+ +P T
Sbjct: 917 IPNASPTTPLFGTPSPTVGLSTGTDQMNGGQMAGDKNPFAFSAASPFGLPSSSPSTPTLF 976
Query: 416 TIPRT 430
+ P T
Sbjct: 977 STPAT 981
>04_01_0113 + 1188285-1188420,1189245-1189795
Length = 228
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 263 TTKKPTMT-VSAPS-AVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIP 424
TT K ++T ++ PS A+P + T R T+ +N+V+K QAP V P
Sbjct: 112 TTAKGSLTDLNLPSIAIPNLRTFQAMTRTVTNVGQVNAVYKAFFQAPAGVEMAVEP 167
>11_03_0212 -
11761856-11762037,11762302-11762398,11763571-11764545,
11766172-11766263,11766450-11766510
Length = 468
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 305 VPTVNTNGNRGRYDTDP-DDINSVFKIPTQAPGT 403
+PT N +G + T P D + F IP P T
Sbjct: 137 IPTANNEQQKGNFITTPKDKVAKSFDIPNNFPNT 170
>09_06_0059 -
20584196-20584288,20584389-20585055,20585411-20585732,
20585862-20586000,20586261-20586322,20586371-20586434,
20586674-20586826,20586952-20587082,20587175-20587336,
20588060-20588264
Length = 665
Score = 27.1 bits (57), Expect = 7.0
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 149 RILAILVLVGSAHA-QANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVP 310
R + + G A A +A IDLE N K P+Q T +P + V P VP
Sbjct: 417 RTASSTINAGDAQACSTSATHIDLENKNGDSKTPSQDKRETNQPPIRV-VPFPVP 470
>08_02_1508 +
27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 248 NQAPTTTKKPTMTVSAPSAVPTV 316
++APTT K+P+ T PS P +
Sbjct: 314 SRAPTTQKQPSSTFFTPSTTPKI 336
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 245 PNQAPTTTKK--PTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAP 397
P PT++++ PT +V++P+ VP T+ R D + ++P+QAP
Sbjct: 933 PTGMPTSSRRQEPTPSVTSPTGVP---TSPRRQEPTPDTQRRRAADQMPSQAP 982
>07_03_1115 -
24076506-24076677,24077169-24077266,24077622-24077743,
24079059-24079235,24079809-24079897,24079919-24079965,
24080423-24080519,24080600-24080682,24080716-24080796,
24081043-24081199,24081323-24081750,24081985-24082014,
24083180-24083300,24083432-24083697
Length = 655
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 181 CSRPGKRQ*YRPRRNKQH---FQNTESSTNNY*ETNHDC*CPISCSDCKYQR 327
C + G Q P + H FQ SST + + N DC C S C Y+R
Sbjct: 122 CEQCGNHQSESPNIIEAHDPRFQPDLSSTYSPVKCNVDCTCDNERSQCTYER 173
>03_06_0726 -
35761959-35762063,35762232-35762336,35762543-35762665,
35763056-35763316,35763449-35763905,35764637-35764755,
35764851-35764919
Length = 412
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 5/85 (5%)
Frame = +2
Query: 197 NANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRG-----RYDTDPDD 361
N N ++ + K P Q P PT S ++ G G + T P +
Sbjct: 159 NTNGKQEPDVTNSQKAPTQTPKAPTHPTFATSVKKSIGAKKIGGKTGGLGVKKLTTKPSE 218
Query: 362 INSVFKIPTQAPGTVNPVTIPRTTK 436
S++ + P PV TTK
Sbjct: 219 --SLYDQKPEEPKPAAPVMTTSTTK 241
>02_05_0044 - 25375239-25376233,25377233-25377364,25377586-25378504
Length = 681
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 427 SGDGYRIDCSRSLRRYFENTVYIIGVCIIASSITV 323
S GY +C+ RY + YI+G C + ITV
Sbjct: 280 SSGGYTCECTN---RYLQGNPYILGGCNMQDHITV 311
>07_03_1391 +
26234647-26235026,26235112-26235226,26235345-26235410,
26235519-26235607,26235717-26235807,26235917-26236063,
26236160-26236252,26236373-26236474,26236581-26237255
Length = 585
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 194 ANANDIDLEEINSIFKIPN-QAPTTTKKPTMTVSAPSAVPTVN 319
A+A D EE+NS + N Q P T+ PT +S+ T+N
Sbjct: 384 ADAADNTEEEMNSSEQTVNCQTPEATETPTEEISSQHIQETIN 426
>06_03_0189 - 17697779-17698939
Length = 386
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -3
Query: 430 SSGDGY--RIDCSRSLRR-YFENTVYIIGVCIIASSI 329
S GDG R SRS RR Y + +YI+ VC S I
Sbjct: 145 SGGDGESTRAGGSRSARRKYAASAIYIVSVCFSDSCI 181
>04_04_0042 + 22328464-22329858
Length = 464
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 257 PTTTKKPTMTVSAPSAVPTVNTN 325
PTTT T T +AP+ PT + N
Sbjct: 298 PTTTTTATATATAPAPAPTPSPN 320
>02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072
Length = 735
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 433 SSSGDGYRIDCSRSLRRYFENTVYIIGVC 347
S+ G+GYR +CSR +E Y+ G C
Sbjct: 261 STEGEGYRCNCSRG----YEGNPYLDGGC 285
>01_05_0128 + 18413029-18413318,18413946-18414139,18414447-18414553
Length = 196
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 254 APTTTKKPTMTVSAPSAVPTVNTNGNRGR 340
A T MTVS SA +V GNRGR
Sbjct: 12 AVPTAASTAMTVSVASAGGSVGRGGNRGR 40
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,868,531
Number of Sequences: 37544
Number of extensions: 204793
Number of successful extensions: 630
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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