Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D14
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 36 0.014
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 36 0.014
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 35 0.031
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 33 0.073
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 32 0.17
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 32 0.17
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 32 0.22
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 0.29
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 0.29
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 31 0.29
Z49911-8|CAD59151.1| 250|Caenorhabditis elegans Hypothetical pr... 31 0.51
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 30 0.68
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 30 0.89
Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical p... 30 0.89
Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical p... 30 0.89
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 30 0.89
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 29 1.2
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 29 1.2
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 1.6
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 1.6
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 29 2.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 2.1
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 29 2.1
U13071-1|AAL65794.1| 462|Caenorhabditis elegans Hypothetical pr... 28 2.7
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 28 2.7
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 3.6
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 28 3.6
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 28 3.6
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 27 4.8
AL117193-13|CAB55004.2| 478|Caenorhabditis elegans Hypothetical... 27 4.8
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 4.8
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 23 5.2
Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical p... 27 6.3
U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid precur... 27 6.3
U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid precurs... 27 6.3
U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid pr... 27 6.3
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical p... 27 8.3
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 27 8.3
U50191-8|AAK31551.3| 296|Caenorhabditis elegans Hypothetical pr... 27 8.3
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 27 8.3
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 35.9 bits (79), Expect = 0.014
Identities = 23/80 (28%), Positives = 35/80 (43%)
Frame = +2
Query: 209 IDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPT 388
+ L +++++ + + TTT+KP+ T + PS PT T T P S T
Sbjct: 575 LPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTT----TTTPKPTTST-STST 629
Query: 389 QAPGTVNPVTIPRTTKKPTT 448
T T TT +PTT
Sbjct: 630 STTTTTTTSTTATTTPQPTT 649
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 35.9 bits (79), Expect = 0.014
Identities = 23/80 (28%), Positives = 35/80 (43%)
Frame = +2
Query: 209 IDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPT 388
+ L +++++ + + TTT+KP+ T + PS PT T T P S T
Sbjct: 575 LPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTT----TTTPKPTTST-STST 629
Query: 389 QAPGTVNPVTIPRTTKKPTT 448
T T TT +PTT
Sbjct: 630 STTTTTTTSTTATTTPQPTT 649
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 34.7 bits (76), Expect = 0.031
Identities = 27/101 (26%), Positives = 37/101 (36%)
Frame = +2
Query: 146 YRILAILVLVGSAHAQANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTN 325
+ + +L G A N + L + + Q TTTKKP+ T S T T
Sbjct: 343 HALFELLSKTGDDEALQNTFPLPLTTTTEVIR---QVTTTTKKPSTTTSTKKLTTTTTTT 399
Query: 326 GNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKKPTT 448
+ T + V I T + P T P TT TT
Sbjct: 400 PKPSQKPTTTTTKSPVV-ITTTTKTSPKPTTSPSTTTSTTT 439
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 33.5 bits (73), Expect = 0.073
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +2
Query: 251 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRT 430
+AP TT+ P T + P+ N + Y++ D S PTQ P T P T T
Sbjct: 237 KAPPTTRTPPTTRTPPTTSQPAEFNIDDDDYESSEDISESHTTPPTQTPPTQTPPT-TTT 295
Query: 431 TKKPT 445
T++ T
Sbjct: 296 TRRVT 300
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 32.7 bits (71), Expect = 0.13
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 257 PTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQ-APGTVNPVTIPRTT 433
PTTT T T + + PT T +T + + T+ T P T P TT
Sbjct: 224 PTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTT 283
Query: 434 KKPTT 448
PTT
Sbjct: 284 TTPTT 288
Score = 31.9 bits (69), Expect = 0.22
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +2
Query: 260 TTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKK 439
TTT PT T + P+ T T T + T T P T +TT K
Sbjct: 212 TTTTVPTTTTTTPTTTTTTTTTPTT---TTTTPTTTTTPATTTSETTTTTPTTTTQTTTK 268
Query: 440 PTT 448
PTT
Sbjct: 269 PTT 271
Score = 29.5 bits (63), Expect = 1.2
Identities = 23/63 (36%), Positives = 26/63 (41%)
Frame = +2
Query: 260 TTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKK 439
TTT PT T +AP+ T T T P +V PT T P T TT
Sbjct: 184 TTTTTPTTTTTAPTTTTTTPTTTT-----TTPTTTTTV---PTTT--TTTPTTTTTTTTT 233
Query: 440 PTT 448
PTT
Sbjct: 234 PTT 236
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/66 (28%), Positives = 21/66 (31%)
Frame = +2
Query: 245 PNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIP 424
P TT KPT T + P+ PT T T S T P T
Sbjct: 259 PTTTTQTTTKPTTTTTTPTTTPTTTTTPT--TTTTTAKTTKSTTTTTKTTKTTSTPTTTT 316
Query: 425 RTTKKP 442
T K P
Sbjct: 317 TTPKTP 322
Score = 27.1 bits (57), Expect = 6.3
Identities = 17/64 (26%), Positives = 21/64 (32%)
Frame = +2
Query: 257 PTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTK 436
PTT T T + + PT T +T PT T T TT
Sbjct: 78 PTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTT 137
Query: 437 KPTT 448
+ TT
Sbjct: 138 ETTT 141
Score = 27.1 bits (57), Expect = 6.3
Identities = 20/63 (31%), Positives = 23/63 (36%)
Frame = +2
Query: 260 TTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKK 439
TTT PT T + + PT T T P + T P T T TT
Sbjct: 127 TTTTTPTTTTTETTTTPTTTTT----ETTTTPTTTTTTPTTTTTTP-TTTTTTPTTTTTT 181
Query: 440 PTT 448
PTT
Sbjct: 182 PTT 184
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 32.3 bits (70), Expect = 0.17
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 239 KIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIP-TQAPGTVNPV 415
++P P+ T+ P MTV+ + + + T+ T I ++P T P T P+
Sbjct: 734 EVPMTGPSRTEVP-MTVTPETGLSSTVTSKTEPPKTTTEKRITPRTEVPKTVPPRTGPPM 792
Query: 416 TIPRTTKKPTT 448
T+P T+ PTT
Sbjct: 793 TVPPGTEAPTT 803
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRT 430
T++APS +P N+N D D N V +P + NP TI T
Sbjct: 442 TITAPSDIPRANSNFEEYPDDGGYDGTNDVAIVPLRTQHGTNPSTITTT 490
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRT 430
T++APS +P N+N D D N V +P + NP TI T
Sbjct: 767 TITAPSDIPRANSNFEEYPDDGGYDGTNDVAIVPLRTQHGTNPSTITTT 815
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +2
Query: 248 NQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPR 427
++AP T PT+ ++P+ +PT + G T P ++ + P + T P
Sbjct: 609 SKAPVVTTSPTLAPTSPTKLPT-SPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPV 667
Query: 428 TTKKPTT 448
PTT
Sbjct: 668 NPTSPTT 674
Score = 26.6 bits (56), Expect = 8.3
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = +2
Query: 257 PTTTKKPTMTVSAPSAVPTVNTNGNRG----RYDTDPDDINSVFKIPTQAPGTVNPVT-- 418
PTTT PT +AP PTV ++ + T + + + T TV PVT
Sbjct: 527 PTTTGSPTTQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTTTSLLTTLTTPTV-PVTTT 585
Query: 419 -IPRTTKKPTT 448
+P + PTT
Sbjct: 586 VVPSSATVPTT 596
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +2
Query: 248 NQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPR 427
++AP T PT+ ++P+ +PT + G T P ++ + P + T P
Sbjct: 665 SKAPVVTTSPTLAPTSPTKLPT-SPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPV 723
Query: 428 TTKKPTT 448
PTT
Sbjct: 724 NPTSPTT 730
Score = 26.6 bits (56), Expect = 8.3
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = +2
Query: 257 PTTTKKPTMTVSAPSAVPTVNTNGNRG----RYDTDPDDINSVFKIPTQAPGTVNPVT-- 418
PTTT PT +AP PTV ++ + T + + + T TV PVT
Sbjct: 583 PTTTGSPTTQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTTTSLLTTLTTPTV-PVTTT 641
Query: 419 -IPRTTKKPTT 448
+P + PTT
Sbjct: 642 VVPSSATVPTT 652
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 31.5 bits (68), Expect = 0.29
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 251 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRT 430
+ PTTT++PT T P+ T T Y+T DD + IP + T T T
Sbjct: 3012 EEPTTTEEPTTTTEEPT---TTTTEEPYHIYETSRDDDPEII-IPVET--TTTSTTTTST 3065
Query: 431 TKKP 442
T++P
Sbjct: 3066 TEEP 3069
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 31.5 bits (68), Expect = 0.29
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 251 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRT 430
+ PTTT++PT T P+ T T Y+T DD + IP + T T T
Sbjct: 3012 EEPTTTEEPTTTTEEPT---TTTTEEPYHIYETSRDDDPEII-IPVET--TTTSTTTTST 3065
Query: 431 TKKP 442
T++P
Sbjct: 3066 TEEP 3069
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 31.5 bits (68), Expect = 0.29
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 251 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRT 430
+ PTTT++PT T P+ T T Y+T DD + IP + T T T
Sbjct: 562 EEPTTTEEPTTTTEEPT---TTTTEEPYHIYETSRDDDPEII-IPVET--TTTSTTTTST 615
Query: 431 TKKP 442
T++P
Sbjct: 616 TEEP 619
>Z49911-8|CAD59151.1| 250|Caenorhabditis elegans Hypothetical
protein M28.10 protein.
Length = 250
Score = 30.7 bits (66), Expect = 0.51
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 236 FKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPG-TVNP 412
F P+ +T P+ T S S V V NG+ T P ++ + T APG TV+
Sbjct: 141 FSPPSTIAPSTIAPSTTASDVSTVNPVTDNGSTVSQGTQPTGGSTAAPVSTDAPGSTVSG 200
Query: 413 VT 418
T
Sbjct: 201 AT 202
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 30.3 bits (65), Expect = 0.68
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +2
Query: 209 IDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPT 388
I L EI S K+ P+ KP S+P ++P T + Y TD S+ K
Sbjct: 330 IPLSEIKSDNKLSTVTPS---KPAEKKSSPKSLPPAETIVSNRPYLTDIAHGRSMLKKTV 386
Query: 389 QAPGTVNPVTIPRTTKKPTT 448
++PG +P R K+P +
Sbjct: 387 RSPGG-SPACQVRHQKRPVS 405
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 29.9 bits (64), Expect = 0.89
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +2
Query: 218 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAP 397
EE+ + +I +APTTT++ T T + A T T T + T++
Sbjct: 260 EEVTTT-EITTEAPTTTEEVTTTETTIEA-QTTTTTERMSPSTTKTSTTTTAKPTTTRST 317
Query: 398 GTVNPVTIPRTTKKPTT 448
T P T+ TT+ PTT
Sbjct: 318 TTQRPQTV-ATTEAPTT 333
>Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 29.9 bits (64), Expect = 0.89
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 170 LVGSAHAQANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDT 349
+V S + +A +I+L+ I+SI + + TT + +VP V+TN R
Sbjct: 129 VVWSKYPPGSAMNIELDGIHSISGVASSFYTTYTAINQVMIVGFSVPDVDTNLLRQSAIY 188
Query: 350 DPDDINSVF 376
D D +N+ F
Sbjct: 189 DGDSVNAKF 197
>Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 29.9 bits (64), Expect = 0.89
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 170 LVGSAHAQANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDT 349
+V S + +A +I+L+ I+SI + + TT + +VP V+TN R
Sbjct: 129 VVWSKYPPGSAMNIELDGIHSISGVASSFYTTYTAINQVMIVGFSVPDVDTNLLRQSAIY 188
Query: 350 DPDDINSVF 376
D D +N+ F
Sbjct: 189 DGDSVNAKF 197
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 29.9 bits (64), Expect = 0.89
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 254 APTTTKKPTMTVSAPSAVPTVNTN 325
APTTT+KPT T + P+ T T+
Sbjct: 442 APTTTQKPTTTTTTPAPTTTSTTS 465
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 29.5 bits (63), Expect = 1.2
Identities = 22/55 (40%), Positives = 24/55 (43%)
Frame = +2
Query: 254 APTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVT 418
APTTT T T +AP VPTV+ R T S TQAP T T
Sbjct: 477 APTTTS--TTTTTAPITVPTVSPTTTTTR-QTTTTARTSTTTTTTQAPPTTTTST 528
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 29.5 bits (63), Expect = 1.2
Identities = 22/55 (40%), Positives = 24/55 (43%)
Frame = +2
Query: 254 APTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVT 418
APTTT T T +AP VPTV+ R T S TQAP T T
Sbjct: 477 APTTTS--TTTTTAPITVPTVSPTTTTTR-QTTTTARTSTTTTTTQAPPTTTTST 528
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 260 TTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVT-IPRTTK 436
T+T PT T +AP+ T +T + T + PT T P T P TT+
Sbjct: 307 TSTTTPTTTTTAPTTTTTASTT----TFKTTTITTTTQTTTPTTTATTTKPTTTTPTTTR 362
Query: 437 KP 442
P
Sbjct: 363 TP 364
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/64 (28%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = +2
Query: 260 TTTKKPTMTVSAPSAVP-TVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTK 436
TTT PT T + P+ P T T ++ + S T T TT
Sbjct: 271 TTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTF 330
Query: 437 KPTT 448
K TT
Sbjct: 331 KTTT 334
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 227 NSIFKIPNQAPTTT-KKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGT 403
N + Q PTT+ +K T A S+ PT T + T P +S + + + T
Sbjct: 192 NETTSVTTQNPTTSNQKNETTDEATSSPPTTTTPTTTLKPTTSPQKPDSTEEATSPSQST 251
Query: 404 VNPVTIPRTTKKPTT 448
PV T+ PTT
Sbjct: 252 TTPV----ATQNPTT 262
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/71 (23%), Positives = 28/71 (39%)
Frame = +2
Query: 230 SIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVN 409
S K+P AP T +KP P + + + +D + ++S T P TV
Sbjct: 139 SASKLPKVAPKTVEKPKTPAKKPVEISPSTKENTKTKKVSDDEFVDSDDSFDTFTPITVK 198
Query: 410 PVTIPRTTKKP 442
T + + P
Sbjct: 199 KKTPEKRKETP 209
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +2
Query: 275 PTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKKPT 445
P APS +NG + RY T + P T+ PV P T+ +PT
Sbjct: 830 PPPAQGAPSPSGAAGSNGKQPRYGTPAPPSRASAPTPQPLSSTM-PVVAPSTSTQPT 885
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 358 IGVCIIASSITVGIYSRNS*W-GTNSHGWF 272
IGVC I +SI + S N W GT S W+
Sbjct: 486 IGVCCIVTSILCILISTNWTWKGTGSEAWY 515
>U13071-1|AAL65794.1| 462|Caenorhabditis elegans Hypothetical
protein T22F7.5 protein.
Length = 462
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 254 APTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPD 358
AP + P TV P+ P+V + GN G+ PD
Sbjct: 132 APGAPETPGATVPPPTMSPSVTSGGNPGKSLCPPD 166
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/62 (29%), Positives = 23/62 (37%)
Frame = +2
Query: 260 TTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKK 439
TTT+KPT S ++ T T T + T T P T TT +
Sbjct: 149 TTTEKPTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTSTSTTTTETPTTSEATTHE 208
Query: 440 PT 445
PT
Sbjct: 209 PT 210
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.9 bits (59), Expect = 3.6
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Frame = +2
Query: 257 PTTTKKPTMTVSAPSAVPTV---NTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPR 427
PTT T + P A PT T G G T P ++ + P + T P
Sbjct: 487 PTTPTPVPTTTNTPPANPTTATPTTVGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPV 546
Query: 428 TTKKPTT 448
PTT
Sbjct: 547 NPTSPTT 553
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 347 TDPDDINSVFKIPTQAPGTVNPVTIPRTTKKPTT 448
T + ++ + + PT+AP T P T TT++PTT
Sbjct: 469 TTMEPVDEITQKPTEAPTTEEPTT--TTTEEPTT 500
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 347 TDPDDINSVFKIPTQAPGTVNPVTIPRTTKKPTT 448
T + ++ + + PT+AP T P T TT++PTT
Sbjct: 469 TTMEPVDEITQKPTEAPTTEEPTT--TTTEEPTT 500
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 27.5 bits (58), Expect = 4.8
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = +2
Query: 260 TTTKKPTMTVSAPSAV---PTVNTNGNRGRYDTDPDDINSVFK--IPTQAP--GTVNPVT 418
TTT PT T + P+ PT T T + VF+ T+AP T VT
Sbjct: 104 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPLTEVFRTSTTTEAPFFTTTTIVT 163
Query: 419 IPRTTK 436
P TT+
Sbjct: 164 TPTTTE 169
>AL117193-13|CAB55004.2| 478|Caenorhabditis elegans Hypothetical
protein Y105C5A.24 protein.
Length = 478
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 323 NGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKKP 442
NGN +D N+V KIP PG +P+ +P+T P
Sbjct: 304 NGNVPLWDPASGASNTV-KIPKSQPGGRSPLPLPKTEITP 342
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 215 LEEINSIFKIPN-QAPTTTKKPTMTVSAPSAV-PTVNTNGNR--GRYDTDPDDINSV 373
+ E NSI I + PTT K T+T PS+V P+ N + N G P + +++
Sbjct: 666 ISEENSIENISKTKTPTTVPKSTITGRMPSSVNPSDNLSNNEMDGNAHNQPSEFSNL 722
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 23.4 bits (48), Expect(2) = 5.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 386 TQAPGTVNPVTIPRTTK 436
TQ P T VT+P T K
Sbjct: 580 TQVPSTTTSVTVPSTQK 596
Score = 22.2 bits (45), Expect(2) = 5.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 239 KIPNQAPTTTKKPTMTVSAPSAVPTVNTN 325
K + TTTK T++ + + VP+ T+
Sbjct: 560 KSSTTSSTTTKPTTLSTTTTTQVPSTTTS 588
>Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical
protein C16C10.12 protein.
Length = 610
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 124 FFYEIYFKTKTLNSNITDNTFLAVVSLCFLIIFIFFVG 11
F+ E+ K + N DN L V+ LC ++IF + G
Sbjct: 564 FYRELILKQFSFNK---DNYQLDVIGLCSIVIFFYLAG 598
>U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform a protein.
Length = 686
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 218 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNR--GRYDTDPDDINSVFKIP 385
+E + K+ +APTTT KP +PT ++ Y D DD V K P
Sbjct: 466 DEFSKNAKLDVKAPTTTAKPVKETDNAKVLPTEASDSEEEADEYYEDEDD-EQVKKTP 522
>U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform b protein.
Length = 684
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 218 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNR--GRYDTDPDDINSVFKIP 385
+E + K+ +APTTT KP +PT ++ Y D DD V K P
Sbjct: 466 DEFSKNAKLDVKAPTTTAKPVKETDNAKVLPTEASDSEEEADEYYEDEDD-EQVKKTP 522
>U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid
protein precursor protein.
Length = 680
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 218 EEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNR--GRYDTDPDDINSVFKIP 385
+E + K+ +APTTT KP +PT ++ Y D DD V K P
Sbjct: 460 DEFSKNAKLDVKAPTTTAKPVKETDNAKVLPTEASDSEEEADEYYEDEDD-EQVKKTP 516
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +2
Query: 287 VSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKKPT 445
V++ + PT ++ T + P T+ PVT+P TT+K T
Sbjct: 385 VTSTTTAPTTESSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTTEKTT 437
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +2
Query: 203 NDIDLEEINSIFKI---PNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSV 373
+++D +++N +++ + TTT T T + + PT T D +
Sbjct: 298 SEMDSKKVNKLYQCGEYSKTSSTTTTTTTTTTTTTTEEPTTTTEVEEKPKDKKVSSTTTT 357
Query: 374 FKIPTQAPGTVNPVTIPRTTKK 439
K PT T P + R+ K
Sbjct: 358 TKKPTTTT-TTTPKPVERSRNK 378
>Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical
protein R06F6.8b protein.
Length = 1470
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 200 ANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSA 304
A I E+I++ F+ P + T+ TVS+PSA
Sbjct: 964 ARSIGSEDIDAFFRTPPPSAKTSLSRRPTVSSPSA 998
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +2
Query: 251 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTI--P 424
+ PTTT++PT T + T T+ + T NP T P
Sbjct: 518 EVPTTTEEPTTTTGQHKTEKAITTEEPT---TTEESSTTEEVTTTEEPANTGNPPTTENP 574
Query: 425 RTTKKPTT 448
TT++PT+
Sbjct: 575 TTTEQPTS 582
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 218 EEINSIFKIPNQAPTTTKKPTMT-VSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQA 394
E + KI + TTT++PT T + A ++ + T+ + +I S +I T++
Sbjct: 669 ETTTTELKITTEGSTTTEEPTTTAIFAEASTGIITTDEETTSTTSTTPEITSTKEIVTES 728
Query: 395 PGTVNPVTI 421
T V++
Sbjct: 729 AITQTSVSV 737
>U50191-8|AAK31551.3| 296|Caenorhabditis elegans Hypothetical
protein T14B4.3 protein.
Length = 296
Score = 26.6 bits (56), Expect = 8.3
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 317 NTNGNRGRYDTDPDDINSVFKI 382
NT GN YDT +D+ +++++
Sbjct: 133 NTEGNHANYDTYKEDLQNMYRL 154
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 191 QANANDIDLEEINSIFKIPNQA-PTTTKKPTMTVSAPSAVPTVNT 322
Q N I+++E NS Q PTT ++ T++ + + PT T
Sbjct: 1944 QPNREKIEIDEENSSSSNSGQEKPTTKERTTVSTTVSTTTPTEET 1988
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,846,697
Number of Sequences: 27780
Number of extensions: 208446
Number of successful extensions: 966
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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