Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D12
(542 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 79 2e-15
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 71 8e-13
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 50 2e-06
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) 38 0.004
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 28 4.3
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_20930| Best HMM Match : F5_F8_type_C (HMM E-Value=5.2e-08) 28 5.7
SB_52654| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 27 9.9
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 79.4 bits (187), Expect = 2e-15
Identities = 44/142 (30%), Positives = 69/142 (48%)
Frame = +2
Query: 104 CYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHAN 283
CYY + S R P D++P L CTH+L+ A + T+K+ EN H
Sbjct: 25 CYYTNWSQYRPKGGTFWPEDIDPFL--CTHILFSFAKVNQTTHKLDIYEEN-----DHEL 77
Query: 284 YRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDG 463
Y+ I LK+ P+L+ + VGG E ++ ++ + + R F SA+ +GFDG
Sbjct: 78 YQRINALKKINPKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTHGFDG 137
Query: 464 IDLSWQLPNRKPKKIRSSIGSF 529
+DL W+ P + +S G F
Sbjct: 138 LDLDWEYPGMRGGSPKSDKGRF 159
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/143 (29%), Positives = 69/143 (48%)
Frame = +2
Query: 101 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 280
+CYY + S R P D++P L CTH+++ + + T+ M +N D D
Sbjct: 409 VCYYTNWSQYRPKGGTFWPEDIDPHL--CTHVIHSFSKVNLTTHVMEKYEKN-DFDL--- 462
Query: 281 NYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFD 460
Y+ I LK+ P+L+ + VGG E ++ ++ + + R F SA+ GFD
Sbjct: 463 -YKRINALKKINPKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTNGFD 521
Query: 461 GIDLSWQLPNRKPKKIRSSIGSF 529
G+DL W+ P + +S G F
Sbjct: 522 GLDLDWEYPGMRGGSPKSDKGRF 544
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 78.6 bits (185), Expect = 3e-15
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Frame = +2
Query: 101 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 280
+CY+ + + R + LP D++P L CTH++Y A I T K+ + N D
Sbjct: 401 VCYFTNWAQYRPDPVKFLPKDIDPLL--CTHIVYAFAKIDPATNKIGTYEWNDD-----R 453
Query: 281 NYRAITNLKRQFPQLRVFLTVGGDDDTEDP-QKYNLLLESPQARTAFTNSALLLAEQYGF 457
Y+ I +LK + P L+ L VGG + P ++ ++ S RT F +S L L+++Y F
Sbjct: 454 LYKEINDLKLKNPSLKTLLAVGGWNHESGPVSPFSQMVASKSNRTTFISSLLQLSDKYDF 513
Query: 458 DGIDLSWQLP 487
DG DL W+ P
Sbjct: 514 DGFDLDWEYP 523
>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 270
Score = 70.5 bits (165), Expect = 8e-13
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Frame = +2
Query: 101 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGI-QADTYKMVSLNENLDIDRAH 277
+CY+ + S R+ +A+ P D+ PA CTHL+Y A I Q + M N+ D+ +
Sbjct: 22 VCYHTNWSQYRQGRAKFWPEDI-PA-DLCTHLMYSFAKINQKNELAMYEWND----DKLY 75
Query: 278 ANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGF 457
+ A LK++ P+L+ L VGG + ++ ++++ R F +S + + +GF
Sbjct: 76 PRFNA---LKQKNPELKTLLAVGGWNHENANSPFSRMVKTAATRKVFIDSVIRILRTWGF 132
Query: 458 DGIDLSWQLP 487
DG+DL W+ P
Sbjct: 133 DGLDLDWEYP 142
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/132 (28%), Positives = 65/132 (49%)
Frame = +2
Query: 101 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 280
+CYY + + R A+ P +++P+L CTH++Y A + AD K+ N A
Sbjct: 25 VCYYTNWAQYR-GLAKYTPDNIDPSL--CTHIVYAFAKMNADNSKLAMFEWN-----DAA 76
Query: 281 NYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFD 460
Y+ + +LK ++ L VGG + P + ++ + R F + A+L + FD
Sbjct: 77 MYKKVNDLKSS-SNMKTLLAVGGWNMGSGP--FQDMVSTASRRKIFIDDAILFLRNHMFD 133
Query: 461 GIDLSWQLPNRK 496
G+DL W+ P +
Sbjct: 134 GLDLDWEYPGAR 145
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +2
Query: 284 YRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDG 463
Y+ +LK + P L+ L VGG + ++ ++ + +R F +S++ + Q+ FDG
Sbjct: 187 YKEFNDLKLKNPGLKTLLAVGGWNHENYKSPFSRMVRTAASRKVFIDSSIAMLRQWNFDG 246
Query: 464 IDLSWQLPNRK 496
DL W+ P +
Sbjct: 247 FDLDWEYPGNR 257
>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
Length = 561
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +2
Query: 284 YRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDG 463
Y+ + +LK ++ L VGG + P + ++ + R F + A+L + FDG
Sbjct: 2 YKKVNDLKSS-SNMKTLLAVGGWNMGSGP--FQDMVSTASRRKIFIDDAILFLRNHMFDG 58
Query: 464 IDLSWQLPNRK 496
+DL W+ P +
Sbjct: 59 LDLDWEYPGAR 69
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 27 PSPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLKHVCCLRTW 167
P P R R PT H K + T T R ++ +KHV +RT+
Sbjct: 316 PEPTDKRRRDEPPTDIHERRRYRKVTKTKTIRTVTTTVKHVVTVRTY 362
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 27 PSPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLKHVCCLRTW 167
P P R R PT H K + T T R ++ +KHV +RT+
Sbjct: 983 PEPTDKRRRDEPPTDIHERRRYRKVTKTKTIRTVTTTVKHVVTVRTY 1029
>SB_20930| Best HMM Match : F5_F8_type_C (HMM E-Value=5.2e-08)
Length = 172
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 453 PYCSARRRAELVKAVRACGDSNKRLYFCGSSVSSSPPTVKN 331
P+ AR +VK+V + +Y C S +SSSPP +N
Sbjct: 120 PHVFARYIRIIVKSVFRSASIHVEIYGCVSRLSSSPPPREN 160
>SB_52654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 81 LVAKAKSSATMTARAISENLKHVCCLRTWSLLF 179
LVA+ K++ TAR + + +H+ + W++++
Sbjct: 65 LVARCKNALIQTARTVVKRHRHMIAQQRWTVVY 97
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 246 SETILYVSAWMPADLYSRWVQNERAGSKSVGSI 148
+ T++ +AW D Y W+Q + G+ V S+
Sbjct: 398 ASTVIIDTAWCAGDSYDCWLQVDLGGTHCVTSV 430
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,872,921
Number of Sequences: 59808
Number of extensions: 313906
Number of successful extensions: 1486
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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