Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D10
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   0.73 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   1.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.0  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.0  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
 Frame = +3

Query: 138 PSPLTSLAYVPAGALPVLGKS-KC---NRPLQW 224
           P P+ S  Y P G+L  +G S  C     PL+W
Sbjct: 205 PEPVPSTPYPPPGSLGSMGVSVPCGTSGNPLEW 237


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 267 KRILVVVLASGQTLQVARSH 326
           ++ L + LASG+TL V  SH
Sbjct: 163 RQFLHITLASGRTLTVTPSH 182


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +3

Query: 135 NPSPLTSLAYVPAGALPVLGKSKCNRPLQWLLHC 236
           N  P      VP     VL + + N P  WL HC
Sbjct: 639 NLPPAKDTIAVPNNGYVVL-RLRANNPGFWLFHC 671


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +3

Query: 36  PVNSVVSGFVGIVALYLLVARVNQSHSYPGRIPNP 140
           P  SV S  V + + Y+L + +    ++  ++P P
Sbjct: 704 PSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPP 738



 Score = 20.6 bits (41), Expect = 9.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 99  VNQSHSYPGRIPNPSPLTS 155
           +NQS S PG +   S LTS
Sbjct: 677 LNQSISSPGALSGLSSLTS 695


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +3

Query: 36  PVNSVVSGFVGIVALYLLVARVNQSHSYPGRIPNP 140
           P  SV S  V + + Y+L + +    ++  ++P P
Sbjct: 596 PSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPP 630



 Score = 20.6 bits (41), Expect = 9.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 99  VNQSHSYPGRIPNPSPLTS 155
           +NQS S PG +   S LTS
Sbjct: 569 LNQSISSPGALSGLSSLTS 587


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 12/49 (24%), Positives = 18/49 (36%)
 Frame = -3

Query: 298 PDASTTTRMRLNTRVTRRGAVQWSSHWSGRLHFDFPRTGSAPAGTYANE 152
           PD  T   +   T++T      W S+   RL        +    +YA E
Sbjct: 245 PDIYTREELAQRTKLTEARIQVWFSNRRARLRKQITSAATPLVRSYAPE 293


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 319 GPTGCSSRRAR 351
           GP GC  RR R
Sbjct: 151 GPNGCPRRRGR 161


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 319 GPTGCSSRRAR 351
           GP GC  RR R
Sbjct: 210 GPNGCPRRRGR 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,019
Number of Sequences: 336
Number of extensions: 3906
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)