Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D10
(534 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36923| Best HMM Match : FlaC_arch (HMM E-Value=0.34) 31 0.45
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 31 0.78
SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 30 1.0
SB_27463| Best HMM Match : C_tripleX (HMM E-Value=0.11) 30 1.0
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 30 1.4
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 1.8
SB_58912| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 2.4
SB_56221| Best HMM Match : AOX (HMM E-Value=3.6) 29 2.4
SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 2.4
SB_28953| Best HMM Match : rve (HMM E-Value=8.9e-07) 29 2.4
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 2.4
SB_2133| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 2.4
SB_41308| Best HMM Match : rve (HMM E-Value=6e-12) 29 2.4
SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13) 29 2.4
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 29 3.2
SB_54607| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_32270| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_53131| Best HMM Match : MbeB_N (HMM E-Value=2) 28 4.2
SB_45179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_12579| Best HMM Match : zf-C2H2 (HMM E-Value=5.4e-28) 28 4.2
SB_2987| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_2115| Best HMM Match : rve (HMM E-Value=0.091) 28 4.2
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53) 28 5.5
SB_41087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_36596| Best HMM Match : PSP (HMM E-Value=3.3e-18) 28 5.5
SB_35149| Best HMM Match : DUF1172 (HMM E-Value=0.19) 28 5.5
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_13706| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_52889| Best HMM Match : Pex2_Pex12 (HMM E-Value=1) 27 7.3
SB_51727| Best HMM Match : RasGEF_N (HMM E-Value=7.8) 27 7.3
SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 7.3
SB_26014| Best HMM Match : Pex2_Pex12 (HMM E-Value=1) 27 7.3
SB_46590| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_13408| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_3702| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_55336| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_12630| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_36923| Best HMM Match : FlaC_arch (HMM E-Value=0.34)
Length = 240
Score = 31.5 bits (68), Expect = 0.45
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 68 DSGIISAGREGESIPFISWSDPEPFPVNFVGVCTG 172
D G + G E I F+ WS + F N VCTG
Sbjct: 200 DKGNVKMGNELSDISFVLWSVEQEFASNAGAVCTG 234
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 30.7 bits (66), Expect = 0.78
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 209 PSAPVAAPLYSAPPGYPGVQAHPGGGAG 292
P+ P P PPG PG Q PG AG
Sbjct: 59 PNGPKGPPGLPGPPGPPGFQGPPGNPAG 86
>SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1045
Score = 30.7 bits (66), Expect = 0.78
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -1
Query: 234 SGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQRTQ 55
S TG S+ +EP + +P+ + K T + D D RPA+ P + ++
Sbjct: 78 SAVDTGPKAKDSVTKEPASAKPLKSWQKSTSPEANKDSD----SESRRPANPRPFALSSK 133
Query: 54 KPRN 43
KPR+
Sbjct: 134 KPRS 137
>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
Length = 530
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 215 APVAAPLYSAPPGYPGVQA 271
+P A+P Y PP YPG QA
Sbjct: 49 SPQASPAYQPPPAYPGYQA 67
>SB_27463| Best HMM Match : C_tripleX (HMM E-Value=0.11)
Length = 123
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 215 APVAAPLYSAPPGYPGVQA 271
+P A+P Y PP YPG QA
Sbjct: 78 SPQASPAYQPPPAYPGYQA 96
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 209 PSAPVAAPLYSAPPGYPGVQAHPGGG 286
P+ P P + PG+PG+ A PG G
Sbjct: 122 PTGPAGDPGMTGVPGFPGINAIPGEG 147
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +2
Query: 206 QPSAPVAAPLYSAPP--GYPGVQAHP 277
Q AP + Y APP GYPG Q HP
Sbjct: 86 QYGAPPTSQPYGAPPTSGYPGYQQHP 111
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 320 PGHLKRLPRCQHHHQDALEHQGNQAGRCTVEQP 222
P H+K+ P HH D+ GNQA +P
Sbjct: 815 PPHMKKSPFVVHHPPDSASRHGNQAPEAHHHEP 847
>SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1013
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+G+ G D+P+RP + P S
Sbjct: 451 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGTGT----TGSDTPTRPPETEPGSAE 503
Query: 60 TQKPR 46
+P+
Sbjct: 504 ASEPK 508
>SB_58912| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 511
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+G+ G D+P+RP + P S
Sbjct: 421 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGTGT----TGSDTPTRPPETEPGSAE 473
Query: 60 TQKPRNSPA 34
+P SPA
Sbjct: 474 ASEP-VSPA 481
>SB_56221| Best HMM Match : AOX (HMM E-Value=3.6)
Length = 361
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+G+ G D+P+RP + P S
Sbjct: 271 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGTGT----TGSDTPTRPPETEPGSAE 323
Query: 60 TQKPRNSPA 34
+P SPA
Sbjct: 324 ASEP-VSPA 331
>SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1017
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+G+ G D+P+RP + P S
Sbjct: 927 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGTGT----TGSDTPTRPPETEPGSAE 979
Query: 60 TQKPRNSPA 34
+P SPA
Sbjct: 980 ASEP-VSPA 987
>SB_28953| Best HMM Match : rve (HMM E-Value=8.9e-07)
Length = 555
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+G+ G D+P+RP + P S
Sbjct: 465 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGTGT----TGSDTPTRPPETEPGSAE 517
Query: 60 TQKPRNSPA 34
+P SPA
Sbjct: 518 ASEP-VSPA 525
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+G+ G D+P+RP + P S
Sbjct: 1139 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGTGT----TGSDTPTRPPETEPGSAE 1191
Query: 60 TQKPRNSPA 34
+P SPA
Sbjct: 1192 ASEP-VSPA 1199
>SB_2133| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 425
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+G+ G D+P+RP + P S
Sbjct: 335 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGTGT----TGSDTPTRPPETEPGSAE 387
Query: 60 TQKPRNSPA 34
+P SPA
Sbjct: 388 ASEP-VSPA 395
>SB_41308| Best HMM Match : rve (HMM E-Value=6e-12)
Length = 581
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+G+ G D+P+RP + P S
Sbjct: 491 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGTGT----TGSDTPTRPPETEPGSAE 543
Query: 60 TQKPRNSPA 34
+P SPA
Sbjct: 544 ASEP-VSPA 551
>SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13)
Length = 969
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = -2
Query: 359 QNNLALRLLHPVGPGHLKRLPRCQHHHQDALEHQGNQAGRCTVEQPLER 213
Q+ A++L G G H+HQ E+ +C +EQP ++
Sbjct: 151 QSEGAVQLNCSEGVGRSDHTGSVSHNHQSGCENDSQSCDKCQIEQPEDK 199
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 192 QEPVAPQPVHTPTKLTGKGSGSDQD 118
Q+P A +P TP +TG SGSD D
Sbjct: 401 QKPPATRPSATPPPVTGDESGSDYD 425
>SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 1163
Score = 28.7 bits (61), Expect = 3.2
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+G+ G D+P+RP + P S
Sbjct: 1073 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGTGT----TGSDTPTRPPETEPGSAE 1125
Query: 60 TQKPRNSPA 34
+P SPA
Sbjct: 1126 APEP-VSPA 1133
>SB_54607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 258 LVFKRILVVVLASGQTLQVARSHRVQ*SEGKIVLENHCTLPERNTRAQLCQENW 419
+ F R+++++LA T +AR +V+ GK L RN ++C ++W
Sbjct: 1 MAFVRVVLLILAVLPTYGLARWMQVRLKNGKEPHMGMVELRYRNKWGEICDQDW 54
>SB_32270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+G+ G D+P+RP + P S
Sbjct: 195 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGTGT----TGSDTPTRPPETEPGSAE 247
Query: 60 TQKP 49
+P
Sbjct: 248 ASEP 251
>SB_53131| Best HMM Match : MbeB_N (HMM E-Value=2)
Length = 374
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 207 CTS---IFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQRTQKPRN 43
CTS +F +P H+ + + +GSG D D + +D + +D + Q N
Sbjct: 5 CTSLAVVFHYRASPSSSHSQSSGSPEGSGDDDDQDDVDLSTNSSDSGEVPPHVQDAMN 62
>SB_45179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 29 LNAGEFRGFWVRWDSGIISAGREGESIPFISWSDPEPFPVNFVGVCTGWGAT 184
+ GEF +W+R + +IS G + I + P ++VGV W A+
Sbjct: 144 IKEGEFETYWMRISNVLISLGGNKDEID--NLKTKRPATRDYVGVLQQWRAS 193
>SB_12579| Best HMM Match : zf-C2H2 (HMM E-Value=5.4e-28)
Length = 400
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 284 HHQDALEHQGNQAGRCTVEQPLERTVA 204
HHQD++ H G AG + L T+A
Sbjct: 106 HHQDSMSHLGTSAGLTSHSLALHETIA 132
>SB_2987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 207 CTS---IFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQRTQKPRN 43
CTS +F +P H+ + + +GSG D D + +D + +D + Q N
Sbjct: 5 CTSLAVVFHYRASPSSSHSQSSGSPEGSGDDDDQDDVDLSTNSSDSGEVPPHVQDAMN 62
>SB_2115| Best HMM Match : rve (HMM E-Value=0.091)
Length = 345
Score = 28.3 bits (60), Expect = 4.2
Identities = 24/69 (34%), Positives = 33/69 (47%)
Frame = -1
Query: 240 LYSGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQR 61
L G AT + S+ + P P P T+ TG G+ D G D+P+RP + P S
Sbjct: 255 LPKGTATTSPTGISV-ETPTRPSP--PLTRDTGPGT----DTTGSDTPTRPPETEPGSAE 307
Query: 60 TQKPRNSPA 34
+P SPA
Sbjct: 308 ASEP-VSPA 315
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 206 QPSAPVAAPLYSAPPGYPGVQAHPGGGAG 292
QPS+P AP+ P + PGG AG
Sbjct: 1880 QPSSPARAPINRVPAMSDSIAKLPGGAAG 1908
>SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53)
Length = 287
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 114 SYPGRIPNPSPLTSLAYV 167
S P R P+PSPLTS+ Y+
Sbjct: 208 SAPVRAPSPSPLTSIYYI 225
>SB_41087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +3
Query: 171 AGALPVLGKSKCNRPLQWLLHCTAPRLVTLVFKRILVVVLASG 299
+GALP+ +R +Q+++H + R+ T KRI +VL++G
Sbjct: 420 SGALPLYNADTSSRIIQFIIHNSTRRIET-AEKRIDSLVLSAG 461
>SB_36596| Best HMM Match : PSP (HMM E-Value=3.3e-18)
Length = 855
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 87 LVARVNQSHSYPGRIPNPSPLTSL 158
L+ R++Q H P P+PSP T L
Sbjct: 671 LIKRLHQKHHLPAVTPSPSPNTEL 694
>SB_35149| Best HMM Match : DUF1172 (HMM E-Value=0.19)
Length = 1150
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 177 PQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQRTQKPRNSPAFKIEGVSISTL 1
P + +PT +T S+ D+ IDS ++ T+ N PA I G I TL
Sbjct: 337 PSNLASPTSVTASFDSSNDDVMDIDSSD--WSVLSDDGNTEASTNQPAVSIGGDPIVTL 393
>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 365 VLQNNLALRLLHPVGPGHLKRLPRCQHHHQDALEHQGNQAGRCT 234
VL NN + L P G +K + RC+ H+ E G RCT
Sbjct: 743 VLSNNSCINLC-PSGTFLVKGIHRCRPCHESCAECTGAGHDRCT 785
>SB_13706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 201 SIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPAD 82
++F P+ +P TG+ GSD D +G D D
Sbjct: 312 NVFSIPIYVKPSEYVQPYTGRNCGSDDDHDGDDEDDHDGD 351
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 209 PSAPVAAPLYSAPPGYPGVQAHPGGGAGIWAD 304
P+AP A P P P A P GG G AD
Sbjct: 187 PAAPPAPPFGGPPSAPPPPPAPPVGGGGSLAD 218
>SB_52889| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)
Length = 623
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 138 PSPLTSLAYVPAGALPVLG---KSKCNRPLQWLLHCTAPRLVTLVF 266
PSP+++ Y + +PVLG S+C P+ +L T +L+F
Sbjct: 147 PSPISTYNYTNSEEIPVLGLEAYSRCKPPISRVLLFTLTVFFSLLF 192
>SB_51727| Best HMM Match : RasGEF_N (HMM E-Value=7.8)
Length = 243
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 322 PTGCSSRRARLFWRTIVRCQSA 387
P GC+SRR + R I RC A
Sbjct: 122 PEGCASRRRKRLTRCIYRCSGA 143
>SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4277
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = -3
Query: 268 LNTRVTRRGAVQWSSHWSGRLHFDFPRTGSAPAGTYANEVNGE--GFGIRPGYEWD 107
L R R AV W SH S R+ RT P T NG I+ EWD
Sbjct: 2039 LVARYVRFVAVSWRSHISMRVELYGKRTVRRPRPTSCGIGNGRLPNRNIKASSEWD 2094
>SB_26014| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)
Length = 578
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 138 PSPLTSLAYVPAGALPVLG---KSKCNRPLQWLLHCTAPRLVTLVF 266
PSP+++ Y + +PVLG S+C P+ +L T +L+F
Sbjct: 204 PSPISTYNYTNSEEIPVLGLEAYSRCKPPISRVLLFTLTVFFSLLF 249
>SB_46590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 972
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -1
Query: 192 QEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSP---SRPADIMPLSQRTQKPRNSPAFKIE 22
Q + PQ H P + G+ + M + SP + P + + Q+ + P N P E
Sbjct: 479 QGSLQPQGTHYPQGVAVSGASASGQMM-MQSPYMGTSPQPVYVMQQQARPPFNQPQMGSE 537
Query: 21 GVSIS 7
GV S
Sbjct: 538 GVGSS 542
>SB_13408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 512 PSC*GHLRESGN*VCHVQDHPMVYRHIRAMAPIFLAELRPRVALW 378
P GH++ + + H+Q+ P V HI+ P+ + ++ A+W
Sbjct: 121 PPVIGHIQNTPPVIGHIQNTPPVIGHIQNTPPV-IGHIQNTPAIW 164
>SB_3702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/15 (73%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
Frame = +2
Query: 236 YSAPP-GYPGVQAHP 277
YS PP GYPGVQ +P
Sbjct: 14 YSQPPQGYPGVQTYP 28
>SB_55336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 27.1 bits (57), Expect = 9.6
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Frame = -3
Query: 517 GHPVVRATYENLVIRFAMFKTTPWY---IGTSVRWHQFS--WQSC-ALVLRSGNVQWFSR 356
G PV+ T + +R + + PW I S WHQFS W L + + N S
Sbjct: 265 GAPVLFYTVKYRTVRGTLGRG-PWVPRNISVSSTWHQFSLDWDKVYELSVTAWNKYGESV 323
Query: 355 TILPSDYCTRWDLAT*SVCPDASTTTRM 272
T L D C + T P A+TTT +
Sbjct: 324 TDLELDTC----VVTVGADPSAATTTAL 347
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -1
Query: 189 EPVAPQPVHTPTKLTGKGSGSDQD--MNGIDSPSRPADIMP 73
+P AP P T G +G+D D D+ S P+D MP
Sbjct: 984 DPPAPPPSATSAADAGLTAGTDSDAAAEAEDTSSHPSDKMP 1024
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = -1
Query: 186 PVAPQPVHTPTKLTGKGSGSDQDMN----GIDSPSRPADIMPLSQRTQKPRNSP-AFKIE 22
P+ P+P +K +GSGS+ + + GI S + P ++ + QK N I
Sbjct: 1535 PIKPKPPIPSSKPARRGSGSNNNSDDAGVGIYSEASPTRNNEINYQRQKETNPDIPLSIG 1594
Query: 21 GVSIST 4
G SI T
Sbjct: 1595 GASIDT 1600
>SB_12630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 27.1 bits (57), Expect = 9.6
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = -1
Query: 234 SGAATGADGCTSIFQEPVAPQPVHTPTKLTGKGSGSDQDMNGIDSPSRPADIMPLSQRTQ 55
S A T G + + P P P T TG G+G+ G D+P+RP + P S
Sbjct: 931 STATTSPTGIS--VETPTRPSP--PLTIYTGPGTGT----TGSDTPTRPPETEPGSAEAS 982
Query: 54 KPRNSPA 34
+P SPA
Sbjct: 983 EP-VSPA 988
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,584,754
Number of Sequences: 59808
Number of extensions: 516025
Number of successful extensions: 1732
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1724
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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